Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00808 Erythranthe guttata HOM05D004540 ORTHO05D004852 2.8e-45 184.9 92 100.0
Migut.L00903 Erythranthe guttata HOM05D004540 ORTHO05D004852 7.2e-25 117.1 74 83.8
Migut.H01103 Erythranthe guttata HOM05D004540 ORTHO05D004852 3.5e-11 71.6 69 50.7
Phvul.009G148100 Phaseolus vulgaris HOM05D004540 ORTHO05D004852 1.9e-09 65.9 79 43.0
Ciclev10026873m.g Citrus clementina HOM05D004540 ORTHO05D004852 2.1e-08 62.4 93 41.9
QL06p029800 Quercus lobata HOM05D004540 ORTHO05D004852 2.8e-08 62.0 78 42.3
Cfa002837 Carpinus fangiana HOM05D004540 ORTHO05D004852 3.6e-08 61.6 79 43.0
Thecc.01G124700 Theobroma cacao HOM05D004540 ORTHO05D004852 4.7e-08 61.2 89 41.6
Cc07_g17790 Coffea canephora HOM05D004540 ORTHO05D004852 6.1e-08 60.8 82 40.2
TPR.G18724 Trifolium pratense HOM05D004540 ORTHO05D004852 6.1e-08 60.8 82 39.0
Haze_25134 Corylus avellana HOM05D004540 ORTHO05D004852 1.0e-07 60.1 79 43.0
Phvul.002G270200 Phaseolus vulgaris HOM05D004540 ORTHO05D004852 1.0e-07 60.1 80 41.2
Medtr8g092860 Medicago truncatula HOM05D004540 ORTHO05D004852 1.4e-07 59.7 82 39.0
CiPaw.04G085800 Carya illinoinensis HOM05D004540 ORTHO05D004852 2.3e-07 58.9 76 40.8
Lalb_Chr12g0203271 Lupinus albus HOM05D004540 ORTHO05D004852 4.0e-07 58.2 79 41.8
Prupe.6G159700 Prunus persica HOM05D004540 ORTHO05D004852 5.2e-07 57.8 82 42.7
TPR.G37334 Trifolium pratense HOM05D004540 ORTHO05D004852 5.2e-07 57.8 80 40.0
Gohir.A10G083507 Gossypium hirsutum HOM05D004540 ORTHO05D004852 1.5e-06 56.2 89 42.7
Medtr3g095690 Medicago truncatula HOM05D004540 ORTHO05D004852 1.5e-06 56.2 87 37.9
CSS0044504 Camellia sinensis var. sinensis HOM05D004540 ORTHO05D004852 2.0e-06 55.8 73 43.8
Gohir.D11G059900 Gossypium hirsutum HOM05D004540 ORTHO05D004852 2.0e-06 55.8 82 45.1
Gorai.007G064600 Gossypium raimondii HOM05D004540 ORTHO05D004852 2.0e-06 55.8 82 45.1
SGA_v2.0_scaffold137G35143 Striga asiatica HOM05D004540 ORTHO05D004852 2.0e-06 55.8 78 41.0
CiPaw.03G127700 Carya illinoinensis HOM05D004540 ORTHO05D004852 2.6e-06 55.5 93 39.8
Gohir.A11G055800 Gossypium hirsutum HOM05D004540 ORTHO05D004852 2.6e-06 55.5 82 43.9
Lj4g0001726 Lotus japonicus HOM05D004540 ORTHO05D004852 3.4e-06 55.1 82 45.1
CARHR094090 Cardamine hirsuta HOM05D004540 ORTHO05D004852 4.4e-06 54.7 81 43.2
FAN19G2513 Fragaria x ananassa HOM05D004540 ORTHO05D004852 4.4e-06 54.7 93 36.6
FvH4_1g23990 Fragaria vesca HOM05D004540 ORTHO05D004852 5.7e-06 54.3 93 36.6
FAN23G3045 Fragaria x ananassa HOM05D004540 ORTHO05D004852 5.7e-06 54.3 93 36.6
FAN26G2008 Fragaria x ananassa HOM05D004540 ORTHO05D004852 5.7e-06 54.3 93 36.6
Glyma.04G215100 Glycine max HOM05D004540 ORTHO05D004852 5.7e-06 54.3 62 48.4
Gohir.D10G105766 Gossypium hirsutum HOM05D004540 ORTHO05D004852 5.7e-06 54.3 93 40.9
Gorai.011G115500 Gossypium raimondii HOM05D004540 ORTHO05D004852 5.7e-06 54.3 93 40.9
Manes.13G071600 Manihot esculenta HOM05D004540 ORTHO05D004852 5.7e-06 54.3 80 37.5
Lalb_Chr08g0238521 Lupinus albus HOM05D004540 ORTHO05D004852 9.8e-06 53.5 93 37.6


User provided reference genes

Program Settings