Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 1.5e-239 832.4 417 100.0
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 3.5e-127 459.1 422 57.3
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 1.6e-119 433.7 435 54.3
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 1.5e-101 374.0 347 55.9
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 2.8e-84 316.6 415 44.1
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 2.5e-80 303.5 413 42.4
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 1.7e-76 290.8 393 42.2
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 2.6e-74 283.5 403 41.2
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 5.9e-74 282.3 399 41.1
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 7.7e-74 282.0 406 40.9
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 2.9e-73 280.0 413 39.7
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 6.5e-73 278.9 422 40.3
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 2.7e-71 273.5 395 39.7
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 5.2e-70 269.2 403 39.2
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 6.7e-70 268.9 408 38.7
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 7.4e-69 265.4 406 38.4
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 2.4e-67 260.4 394 39.1
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 2.4e-67 260.4 433 37.4
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 5.3e-67 259.2 398 36.9
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 9.1e-67 258.5 406 38.4
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 1.6e-66 257.7 404 36.4
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 2.6e-66 256.9 398 36.9
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 2.6e-66 256.9 398 36.9
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 2.9e-65 253.4 398 37.2
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 3.8e-65 253.1 403 36.2
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 1.1e-64 251.5 396 39.9
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 6.1e-63 245.7 405 37.0
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 8.0e-63 245.4 395 36.5
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 1.8e-62 244.2 422 35.8
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 4.0e-62 243.0 390 36.7
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 6.7e-62 242.3 334 38.9
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 8.8e-62 241.9 400 36.0
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 2.0e-61 240.7 399 34.3
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 2.6e-61 240.4 397 37.3
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 3.3e-61 240.0 372 37.6
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 9.7e-61 238.4 410 36.6
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 1.3e-60 238.0 407 35.4
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 1.3e-60 238.0 402 37.8
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 2.2e-60 237.3 411 34.8
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 6.3e-60 235.7 410 36.3
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 8.2e-60 235.3 408 34.1
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 1.4e-59 234.6 410 34.4
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.4e-59 234.6 406 35.5
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 4.1e-59 233.0 391 35.8
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 4.1e-59 233.0 332 42.2
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 1.6e-58 231.1 406 35.2
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 2.7e-58 230.3 427 32.1
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 2.7e-58 230.3 393 36.1
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 3.5e-58 229.9 400 35.0
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 5.9e-58 229.2 403 34.5
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.0e-57 228.4 426 31.7
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.7e-57 227.6 403 33.5
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 1.7e-57 227.6 487 33.9
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 2.2e-57 227.3 404 33.4
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 2.2e-57 227.3 405 33.8
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 2.2e-57 227.3 405 34.6
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 2.9e-57 226.9 406 34.5
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 1.5e-56 224.6 410 32.4
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.9e-56 224.2 426 32.2
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 5.5e-56 222.6 395 35.4
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 2.1e-55 220.7 401 34.7
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 2.7e-55 220.3 334 39.8
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 6.1e-55 219.2 397 34.8
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 1.4e-54 218.0 408 34.8
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 1.8e-54 217.6 398 33.9
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 5.2e-54 216.1 387 35.4
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 1.2e-53 214.9 402 32.1
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 1.5e-53 214.5 402 33.1
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 3.4e-53 213.4 416 32.5
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 4.4e-53 213.0 318 40.9
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 8.3e-52 208.8 433 30.7
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 8.3e-52 208.8 396 33.3
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 2.4e-51 207.2 427 31.1
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 4.1e-51 206.5 403 32.3
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 5.4e-51 206.1 399 33.6
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 5.4e-51 206.1 401 33.2
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 7.0e-51 205.7 336 34.8
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 2.0e-50 204.1 395 32.7
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.7e-50 203.8 409 32.3
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.0e-49 201.8 394 33.0
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 1.9e-48 197.6 407 32.2
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.9e-48 197.6 407 32.2
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 1.9e-48 197.6 417 32.1
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 7.2e-48 195.7 333 35.1
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 1.6e-47 194.5 393 34.1
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 2.8e-47 193.7 391 33.8
MELO3C030470.2 Cucumis melo HOM05D003575 ORTHO05D003587 3.6e-47 193.4 409 30.8
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 8.0e-47 192.2 411 30.2
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.0e-46 191.8 423 28.8
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.8e-46 191.0 403 27.8
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 2.3e-46 190.7 326 34.4
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 3.4e-45 186.8 556 26.8
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 6.3e-44 182.6 372 30.1
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 8.3e-44 182.2 427 30.0
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.4e-43 181.4 454 27.8
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 1.4e-43 181.4 370 29.5
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 3.1e-43 180.3 418 30.4
Sed0014379 Sechium edule HOM05D003575 ORTHO05D003587 2.7e-42 177.2 405 29.6
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.3e-41 174.1 347 31.1
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 3.8e-41 173.3 400 29.8
Dinv21311 Davidia involucrata HOM05D003575 ORTHO05D003587 3.3e-40 170.2 181 48.6
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 6.1e-39 166.0 342 30.7
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 1.8e-38 164.5 338 32.5
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 4.4e-37 159.8 381 30.2
Medtr3g082740 Medicago truncatula HOM05D003575 ORTHO05D003587 4.4e-37 159.8 295 34.6
Cc00_g01040 Coffea canephora HOM05D003575 ORTHO05D003587 1.7e-36 157.9 185 45.4
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.9e-36 156.4 402 26.6
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 8.6e-33 145.6 396 28.8
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 8.0e-31 139.0 178 38.2
Hund01540 Selenicereus undatus HOM05D003575 ORTHO05D003587 1.1e-30 138.7 374 27.5
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 1.8e-30 137.9 178 38.2
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 9.2e-27 125.6 168 41.7
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 1.2e-26 125.2 164 37.2
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.6e-26 124.8 201 35.8
Aqoxy4G01549 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 7.8e-26 122.5 153 43.1
FAN15G3143 Fragaria x ananassa HOM05D003575 ORTHO05D003587 5.0e-25 119.8 178 37.1
RcHm_v2.0_Chr2g0155771 Rosa chinensis HOM05D003575 ORTHO05D003587 5.0e-25 119.8 159 39.6
FvH4_2g12920 Fragaria vesca HOM05D003575 ORTHO05D003587 1.5e-24 118.2 178 36.5
FAN24G1566 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.5e-24 118.2 178 36.5
MD09G1128800 Malus domestica HOM05D003575 ORTHO05D003587 1.5e-24 118.2 160 43.8
TPR.G40538 Trifolium pratense HOM05D003575 ORTHO05D003587 1.9e-24 117.9 153 39.2
FAN20G0397 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.5e-24 117.5 178 36.0
Gohir.A07G087300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 2.8e-23 114.0 322 26.1
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 2.8e-23 114.0 166 34.3
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 8.1e-23 112.5 169 36.7
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 1.4e-22 111.7 203 32.5
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 1.4e-22 111.7 191 33.5
RcHm_v2.0_Chr2g0155791 Rosa chinensis HOM05D003575 ORTHO05D003587 1.8e-22 111.3 175 33.7
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 2.0e-21 107.8 166 34.9
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 3.4e-21 107.1 168 35.7
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 5.8e-21 106.3 166 32.5
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 9.9e-21 105.5 169 34.3
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 1.3e-20 105.1 166 32.5
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 1.3e-20 105.1 166 32.5
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 1.7e-20 104.8 201 32.3
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 2.2e-20 104.4 144 36.8
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 4.9e-20 103.2 145 35.9
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 6.4e-20 102.8 168 34.5
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.1e-19 102.1 168 32.7
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 1.1e-19 102.1 144 35.4
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 1.4e-19 101.7 172 32.0
MBI15_g06462_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 1.4e-19 101.7 282 29.1
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 2.4e-19 100.9 144 34.7
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 3.2e-19 100.5 112 42.9
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 5.4e-19 99.8 165 30.9
Lsat_1_v5_gn_8_78381 Lactuca sativa HOM05D003575 ORTHO05D003587 5.4e-19 99.8 126 36.5
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 9.2e-19 99.0 165 30.9
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 9.2e-19 99.0 165 30.9
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 1.6e-18 98.2 144 34.0
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 3.5e-18 97.1 129 37.2
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 6.0e-18 96.3 159 32.7
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 6.0e-18 96.3 173 31.8
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 1.0e-17 95.5 174 32.2
CAN.G437.9 Capsicum annuum HOM05D003575 ORTHO05D003587 1.3e-17 95.1 182 39.6
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 1.7e-17 94.7 144 32.6
PSO339G5808 Papaver somniferum HOM05D003575 ORTHO05D003587 2.3e-17 94.4 135 40.7
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 5.1e-17 93.2 177 29.4
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 3.3e-16 90.5 114 41.2
MBI15_g48140_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 4.3e-16 90.1 82 50.0
FAN16G0569 Fragaria x ananassa HOM05D003575 ORTHO05D003587 7.3e-16 89.4 216 30.6
SalBow6G1357 Salvia bowleyana HOM05D003575 ORTHO05D003587 1.6e-15 88.2 77 57.1
Zm00001eb287050 Zea mays HOM05D003575 ORTHO05D003587 3.6e-15 87.0 177 31.1
Aqoxy91s001 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 4.7e-15 86.7 111 41.4
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 4.7e-15 86.7 167 29.9
PSO017G1253 Papaver somniferum HOM05D003575 ORTHO05D003587 8.1e-15 85.9 166 31.3
FvH4_6g40520 Fragaria vesca HOM05D003575 ORTHO05D003587 4.0e-14 83.6 100 41.0
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 4.4e-13 80.1 139 35.3
Oeu041110.1 Olea europaea HOM05D003575 ORTHO05D003587 7.6e-13 79.3 133 36.1
FAN14G3058 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.9e-12 77.4 140 30.7
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 4.9e-12 76.6 100 38.0
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 4.9e-12 76.6 102 39.2
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 6.4e-12 76.3 136 30.1
PSO339G3010 Papaver somniferum HOM05D003575 ORTHO05D003587 4.1e-11 73.6 102 38.2
FvH4_3g20450 Fragaria vesca HOM05D039614 ORTHO05D045963 2.1e-10 71.2 82 37.8
FAN11G0216 Fragaria x ananassa HOM05D003575 ORTHO05D045963 2.1e-10 71.2 82 37.8
Zm00001eb264990 Zea mays HOM05D003575 ORTHO05D003587 1.0e-09 68.9 144 27.1
Atru.chr6.3410 Acer truncatum HOM05D000074 ORTHO05D008782 4.3e-08 63.5 80 42.5
Mapoly0033s0032 Marchantia polymorpha HOM05D003575 ORTHO05D003587 7.3e-08 62.8 146 29.5
CAN.G437.8 Capsicum annuum HOM05D003575 ORTHO05D003587 2.1e-07 61.2 78 42.3
Glyma.15G224002 Glycine max HOM05D003575 ORTHO05D003587 3.6e-07 60.5 72 38.9
Dinv26594 Davidia involucrata HOM05D000074 ORTHO05D001293 1.8e-06 58.2 71 46.5
Lalb_Chr14g0362571 Lupinus albus HOM05D003575 ORTHO05D003587 3.1e-06 57.4 86 40.7
SEGI_40115 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 4.0e-06 57.0 75 34.7
MELO3C003471.2 Cucumis melo HOM05D001613 ORTHO05D001556 9.0e-06 55.8 160 29.4


User provided reference genes

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