Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 3.6e-241 837.8 410 100.0
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 2.1e-185 652.5 411 78.3
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 4.0e-184 648.3 410 76.8
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 3.4e-183 645.2 424 76.2
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 6.7e-163 577.8 410 70.5
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.9e-162 576.2 411 69.3
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 4.3e-162 575.1 411 68.9
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 1.6e-161 573.2 411 67.9
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 6.2e-161 571.2 411 68.6
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 8.1e-161 570.9 411 69.3
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.4e-160 570.1 411 68.1
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 3.8e-158 562.0 412 68.4
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.5e-158 561.2 411 67.4
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 2.5e-157 559.3 415 67.7
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 5.5e-157 558.1 412 68.4
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 7.1e-157 557.8 412 68.7
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 4.6e-156 555.1 412 67.0
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 1.0e-155 553.9 411 65.5
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 3.0e-155 552.4 412 68.2
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 5.1e-155 551.6 407 67.1
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 5.1e-155 551.6 412 66.0
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 6.7e-155 551.2 411 67.2
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 6.7e-155 551.2 416 66.3
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 6.7e-155 551.2 451 62.7
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 8.7e-155 550.8 410 67.1
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 8.7e-155 550.8 414 65.9
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 1.1e-154 550.4 411 66.9
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 1.5e-154 550.1 410 67.8
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 2.1e-153 546.2 411 67.6
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 8.2e-153 544.3 411 67.6
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 1.4e-152 543.5 420 64.8
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 2.4e-152 542.7 411 65.9
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 3.1e-152 542.3 410 65.9
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 4.0e-152 542.0 410 66.6
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 6.9e-152 541.2 412 66.5
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 1.2e-151 540.4 413 63.9
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 5.8e-151 538.1 412 65.5
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 2.2e-150 536.2 412 65.5
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 1.1e-149 533.9 452 60.6
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 1.4e-149 533.5 411 65.5
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 9.3e-149 530.8 412 63.1
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 1.2e-148 530.4 412 63.3
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 1.6e-148 530.0 414 65.2
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 3.9e-147 525.4 413 64.4
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 6.7e-147 524.6 417 65.0
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 1.5e-146 523.5 412 64.1
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 2.5e-146 522.7 410 64.4
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 5.7e-146 521.5 412 64.3
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 9.7e-146 520.8 411 63.7
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 9.7e-146 520.8 407 63.6
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 1.6e-145 520.0 412 62.9
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 3.7e-145 518.8 411 63.5
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 6.3e-145 518.1 411 64.5
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 6.3e-145 518.1 416 63.9
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 1.1e-144 517.3 391 66.2
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 3.1e-144 515.8 411 63.3
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 3.1e-144 515.8 412 63.3
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 6.9e-144 514.6 405 63.7
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 9.0e-144 514.2 405 63.7
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 2.0e-143 513.1 430 61.4
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 3.4e-143 512.3 408 64.0
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 1.7e-142 510.0 410 63.7
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 2.9e-142 509.2 405 64.0
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 8.5e-142 507.7 410 62.9
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 8.5e-142 507.7 483 56.3
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 1.1e-141 507.3 413 61.3
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 3.2e-141 505.8 411 61.1
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 4.2e-141 505.4 411 61.1
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 7.2e-141 504.6 417 60.7
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 9.4e-141 504.2 411 60.6
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 1.6e-140 503.4 411 61.3
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 2.1e-140 503.1 415 59.8
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 4.6e-140 501.9 414 62.3
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 1.0e-139 500.7 415 59.5
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 3.9e-139 498.8 411 60.1
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 5.1e-139 498.4 420 61.7
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 8.8e-139 497.7 397 63.0
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 1.5e-138 496.9 411 60.8
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 4.3e-138 495.4 370 66.8
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 9.7e-138 494.2 412 61.2
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 9.7e-138 494.2 412 61.2
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 9.7e-138 494.2 405 62.7
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 1.3e-137 493.8 411 61.6
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.8e-137 492.7 404 62.6
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 1.4e-136 490.3 415 61.4
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 4.1e-136 488.8 402 60.2
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 2.6e-135 486.1 373 65.1
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 2.6e-135 486.1 433 57.3
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 7.7e-135 484.6 413 59.1
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 1.3e-134 483.8 415 60.7
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 6.5e-134 481.5 412 60.7
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 8.5e-134 481.1 412 61.2
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 2.7e-132 476.1 439 58.3
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 2.7e-132 476.1 439 58.3
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 1.3e-126 457.2 412 57.5
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.3e-126 457.2 412 57.8
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 3.8e-126 455.7 351 64.1
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 1.5e-125 453.8 407 56.8
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 4.7e-124 448.7 405 55.8
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 1.4e-123 447.2 405 57.0
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 4.4e-122 442.2 407 57.0
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 9.7e-122 441.0 414 55.8
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 1.3e-121 440.7 405 55.8
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 1.1e-120 437.6 339 64.3
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 5.3e-120 435.3 386 56.5
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 7.0e-120 434.9 404 56.7
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 5.9e-119 431.8 370 60.8
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 3.2e-117 426.0 407 56.0
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.8e-115 420.2 408 54.2
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 2.0e-114 416.8 323 64.4
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 2.6e-114 416.4 409 55.0
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 9.8e-114 414.5 334 61.4
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 3.7e-113 412.5 403 53.8
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 6.3e-113 411.8 409 54.0
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 8.3e-113 411.4 408 53.2
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 1.4e-112 410.6 409 54.0
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 4.1e-112 409.1 403 53.8
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 2.7e-108 396.4 368 55.2
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 2.7e-108 396.4 396 53.5
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 3.6e-108 396.0 390 53.8
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 4.0e-107 392.5 410 51.7
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 2.6e-106 389.8 255 71.0
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 5.7e-106 388.7 326 58.6
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 5.9e-103 378.6 407 51.1
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 1.0e-102 377.9 412 50.0
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 1.3e-102 377.5 407 51.4
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 9.5e-101 371.3 402 51.0
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 6.8e-99 365.2 364 51.6
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 6.8e-99 365.2 364 51.6
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 1.5e-98 364.0 364 51.4
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 3.7e-97 359.4 413 50.4
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.9e-97 359.0 265 65.3
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 4.1e-96 355.9 386 49.0
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 1.2e-95 354.4 267 68.2
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 1.1e-93 347.8 365 51.2
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.9e-93 347.1 275 61.8
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 2.8e-92 343.2 345 53.3
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 6.4e-89 332.0 276 58.3
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 8.3e-89 331.6 234 65.4
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.6e-87 325.9 260 60.4
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 1.7e-86 323.9 409 43.8
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 9.5e-85 318.2 347 49.9
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 3.6e-84 316.2 401 43.6
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 4.0e-83 312.8 255 59.2
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.2e-82 311.2 269 58.0
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 1.5e-82 310.8 409 40.6
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 6.4e-81 305.4 399 42.9
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 5.2e-67 259.2 287 51.9
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 1.7e-65 254.2 197 61.9
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 4.2e-64 249.6 369 40.4
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.1e-59 233.4 160 68.1
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 2.1e-52 210.7 442 34.4
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 1.3e-44 184.9 133 71.4
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 7.9e-39 165.6 124 69.4
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 3.9e-38 163.3 454 28.0
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 5.7e-37 159.5 371 32.6
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 5.7e-37 159.5 132 63.6
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 9.0e-35 152.1 114 64.0
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 3.2e-32 143.7 133 60.2
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 6.7e-30 136.0 346 26.3
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 5.3e-27 126.3 392 28.8
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 1.2e-26 125.2 276 31.9
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 2.6e-26 124.0 279 30.8
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 2.8e-20 104.0 67 74.6
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 1.8e-19 101.3 68 66.2
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.8e-19 101.3 95 58.9
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 2.0e-13 81.3 98 43.9
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.7e-12 78.2 69 58.0
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.8e-11 74.7 72 52.8
Psat7g177720 Pisum sativum HOM05D003933 ORTHO05D004746 2.9e-09 67.4 44 79.5
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 2.5e-08 64.3 41 65.9
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 1.8e-06 58.2 43 67.4
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 5.2e-06 56.6 126 31.7


User provided reference genes

Program Settings