Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00687 Erythranthe guttata HOM05D000372 ORTHO05D004502 2.3e-31 138.3 69 100.0
Migut.L00691 Erythranthe guttata HOM05D000372 ORTHO05D004502 3.8e-18 94.4 78 69.2
arahy.Tifrunner.gnm1.ann1.15FVU2 Arachis hypogaea HOM05D000372 ORTHO05D004502 9.3e-17 89.7 81 60.5
Glyma.01G164800 Glycine max HOM05D000372 ORTHO05D004502 9.3e-17 89.7 78 60.3
arahy.Tifrunner.gnm1.ann1.5M4X83 Arachis hypogaea HOM05D000372 ORTHO05D004502 1.2e-16 89.4 78 60.3
arahy.Tifrunner.gnm1.ann1.ZZ0D7Q Arachis hypogaea HOM05D000372 ORTHO05D004502 1.2e-16 89.4 78 60.3
Cc07_g10990 Coffea canephora HOM05D000372 ORTHO05D004502 1.2e-16 89.4 78 62.8
Phvul.003G264600 Phaseolus vulgaris HOM05D000372 ORTHO05D004502 2.7e-16 88.2 78 60.3
TPR.G19487 Trifolium pratense HOM05D000372 ORTHO05D004502 2.7e-16 88.2 78 61.5
Psat2g153400 Pisum sativum HOM05D000372 ORTHO05D004502 3.5e-16 87.8 77 62.3
Glyma.11G078300 Glycine max HOM05D000372 ORTHO05D004502 4.6e-16 87.4 78 59.0
Oeu048483.2 Olea europaea HOM05D000372 ORTHO05D004502 6.0e-16 87.0 81 60.5
Peaxi162Scf00328g00717 Petunia axillaris HOM05D000372 ORTHO05D004502 6.0e-16 87.0 77 63.6
Lalb_Chr05g0212311 Lupinus albus HOM05D000372 ORTHO05D004502 7.8e-16 86.7 79 58.2
PGSC0003DMG400003578 Solanum tuberosum HOM05D000372 ORTHO05D004502 7.8e-16 86.7 79 60.8
CAN.G1274.23 Capsicum annuum HOM05D000372 ORTHO05D004502 1.0e-15 86.3 78 61.5
Eucgr.I02335 Eucalyptus grandis HOM05D000372 ORTHO05D004502 1.0e-15 86.3 79 59.5
Sopen02g028450 Solanum pennellii HOM05D000372 ORTHO05D004502 1.0e-15 86.3 78 61.5
Glyma.02G046600 Glycine max HOM05D000372 ORTHO05D004502 1.3e-15 85.9 77 61.0
Lj2g0023961 Lotus japonicus HOM05D000372 ORTHO05D004502 1.3e-15 85.9 78 59.0
Lalb_Chr05g0229781 Lupinus albus HOM05D000372 ORTHO05D004502 1.3e-15 85.9 76 64.5
Medtr5g022470 Medicago truncatula HOM05D000372 ORTHO05D004502 1.3e-15 85.9 77 61.0
Psat4g101400 Pisum sativum HOM05D000372 ORTHO05D004502 1.3e-15 85.9 79 58.2
Ca_22392_v3 Cicer arietinum L. HOM05D000372 ORTHO05D004502 1.7e-15 85.5 79 59.5
Ca_24916_v3 Cicer arietinum L. HOM05D000372 ORTHO05D004502 1.7e-15 85.5 77 61.0
Glyma.16G125100 Glycine max HOM05D000372 ORTHO05D004502 1.7e-15 85.5 78 59.0
TPR.G10518 Trifolium pratense HOM05D000372 ORTHO05D004502 1.7e-15 85.5 77 61.0
Medtr8g075340 Medicago truncatula HOM05D000372 ORTHO05D004502 2.3e-15 85.1 79 58.2
Nitab4.5_0001892g0050 Nicotiana tabacum HOM05D000372 ORTHO05D004502 2.3e-15 85.1 72 62.5
Phvul.002G107100 Phaseolus vulgaris HOM05D000372 ORTHO05D004502 2.3e-15 85.1 77 58.4
Potri.005G111700 Populus trichocarpa HOM05D000372 ORTHO05D004502 2.3e-15 85.1 78 59.0
Sabra05G0091400 Salix brachista HOM05D000372 ORTHO05D004502 2.3e-15 85.1 78 60.3
Solyc02g083670.4 Solanum lycopersicum HOM05D000372 ORTHO05D004502 2.3e-15 85.1 78 60.3
VMungo0251G1705 Vigna mungo HOM05D000372 ORTHO05D004502 2.3e-15 85.1 78 59.0
VMungo1215G2296 Vigna mungo HOM05D000372 ORTHO05D004502 2.3e-15 85.1 77 58.4
CSS0008893 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D004502 3.0e-15 84.7 78 60.3
Duzib147G1045 Durio zibethinus HOM05D000372 ORTHO05D004502 3.0e-15 84.7 78 59.0
FAN23G0866 Fragaria x ananassa HOM05D000372 ORTHO05D004502 3.0e-15 84.7 77 61.0
Thecc.01G015600 Theobroma cacao HOM05D000372 ORTHO05D004502 3.0e-15 84.7 78 59.0
Lj4g0025702 Lotus japonicus HOM05D000372 ORTHO05D004502 3.9e-15 84.3 78 59.0
Manes.01G147600 Manihot esculenta HOM05D000372 ORTHO05D004502 5.1e-15 84.0 78 57.7
Oeu014561.2 Olea europaea HOM05D000372 ORTHO05D004502 5.1e-15 84.0 81 59.3
QL06p050985 Quercus lobata HOM05D000372 ORTHO05D004502 5.1e-15 84.0 79 55.7
Prupe.7G170700 Prunus persica HOM05D000372 ORTHO05D004502 6.6e-15 83.6 68 64.7
MSTRG.3608 Avicennia marina HOM05D000372 ORTHO05D004502 8.7e-15 83.2 68 66.2
Cpa.g.sc6.277 Carica papaya HOM05D000372 ORTHO05D004502 8.7e-15 83.2 69 62.3
Manes.02G106100 Manihot esculenta HOM05D000372 ORTHO05D004502 8.7e-15 83.2 78 57.7
Sabra07G0048400 Salix brachista HOM05D000372 ORTHO05D004502 8.7e-15 83.2 79 57.0
CSS0007471 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D004502 1.1e-14 82.8 78 59.0
CiPaw.08G129700 Carya illinoinensis HOM05D000372 ORTHO05D004502 1.1e-14 82.8 79 55.7
Hma1.2p1_0869F.1_g230760 Hydrangea macrophylla HOM05D000372 ORTHO05D004502 1.1e-14 82.8 79 58.2
FvH4_1g11530 Fragaria vesca HOM05D000372 ORTHO05D004502 1.5e-14 82.4 77 59.7
FAN19G2794 Fragaria x ananassa HOM05D000372 ORTHO05D004502 1.5e-14 82.4 77 59.7
FAN26G1228 Fragaria x ananassa HOM05D000372 ORTHO05D004502 1.5e-14 82.4 77 59.7
Nitab4.5_0001658g0020 Nicotiana tabacum HOM05D000372 ORTHO05D004502 1.5e-14 82.4 69 63.8
Potri.007G056400 Populus trichocarpa HOM05D000372 ORTHO05D004502 1.5e-14 82.4 79 55.7
RcHm_v2.0_Chr2g0099171 Rosa chinensis HOM05D000372 ORTHO05D004502 1.5e-14 82.4 77 59.7
SalBow5G2527 Salvia bowleyana HOM05D000372 ORTHO05D004502 1.5e-14 82.4 77 62.3
TWI53G0045 Tripterygium wilfordii HOM05D000372 ORTHO05D004502 1.5e-14 82.4 69 63.8
BcaC06g36332 Brassica carinata HOM05D000372 ORTHO05D004502 1.9e-14 82.0 77 59.7
A07p03130 Brassica napus HOM05D000372 ORTHO05D004502 1.9e-14 82.0 77 59.7
BraA07t28109Z Brassica rapa HOM05D000372 ORTHO05D004502 1.9e-14 82.0 77 59.7
CSS0039853 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D004502 1.9e-14 82.0 81 58.0
CARHR108230 Cardamine hirsuta HOM05D000372 ORTHO05D004502 1.9e-14 82.0 76 59.2
Dinv40109 Davidia involucrata HOM05D000372 ORTHO05D004502 1.9e-14 82.0 77 61.0
PSO541G0188 Papaver somniferum HOM05D000372 ORTHO05D004502 1.9e-14 82.0 72 61.1
C07p05260 Brassica napus HOM05D000372 ORTHO05D004502 2.5e-14 81.6 78 59.0
BolC7t40925H Brassica oleracea HOM05D000372 ORTHO05D004502 2.5e-14 81.6 78 59.0
ECA238G2015 Erigeron canadensis HOM05D000372 ORTHO05D004502 2.5e-14 81.6 77 59.7
Sc07g0001070 Simmondsia chinensis HOM05D000372 ORTHO05D004502 2.5e-14 81.6 70 60.0
Thhalv10022521m.g Eutrema salsugineum HOM05D000372 ORTHO05D004502 3.3e-14 81.3 77 59.7
PSO675G5056 Papaver somniferum HOM05D000372 ORTHO05D004502 3.3e-14 81.3 72 61.1
Rhsim10G0210600 Rhododendron simsii HOM05D000372 ORTHO05D004502 3.3e-14 81.3 79 57.0
Sp3g31280 Schrenkiella parvula HOM05D000372 ORTHO05D004502 3.3e-14 81.3 77 59.7
SpUn0082_0010 Schrenkiella parvula HOM05D000372 ORTHO05D004502 3.3e-14 81.3 77 59.7
THA.LOC104819744 Tarenaya hassleriana HOM05D000372 ORTHO05D004502 3.3e-14 81.3 77 61.0
TWI73G1271 Tripterygium wilfordii HOM05D000372 ORTHO05D004502 3.3e-14 81.3 69 62.3
AT2G17820 Arabidopsis thaliana HOM05D000372 ORTHO05D004502 4.3e-14 80.9 77 58.4
BcaB03g16556 Brassica carinata HOM05D000372 ORTHO05D004502 4.3e-14 80.9 77 59.7
CANSAT25G3275 Cannabis sativa HOM05D000372 ORTHO05D004502 4.3e-14 80.9 68 63.2
Carub.0003s3196 Capsella rubella HOM05D000372 ORTHO05D004502 4.3e-14 80.9 80 57.5
Haze_03739 Corylus avellana HOM05D000372 ORTHO05D004502 5.6e-14 80.5 77 57.1
DCAR_010144 Daucus carota HOM05D000372 ORTHO05D004502 5.6e-14 80.5 78 57.7
FAN28G0543 Fragaria x ananassa HOM05D000372 ORTHO05D004502 5.6e-14 80.5 77 59.7
Gohir.A11G042400 Gossypium hirsutum HOM05D000372 ORTHO05D004502 5.6e-14 80.5 78 56.4
Gohir.D11G045900 Gossypium hirsutum HOM05D000372 ORTHO05D004502 5.6e-14 80.5 78 56.4
Gorai.007G049200 Gossypium raimondii HOM05D000372 ORTHO05D004502 5.6e-14 80.5 78 56.4
Lj4A222T49 Lonicera japonica HOM05D000372 ORTHO05D004502 5.6e-14 80.5 78 59.0
Cfa006992 Carpinus fangiana HOM05D000372 ORTHO05D004502 7.3e-14 80.1 77 57.1
ClCG10G000620 Citrullus lanatus HOM05D000372 ORTHO05D004502 7.3e-14 80.1 81 56.8
Duzib264G1133 Durio zibethinus HOM05D000372 ORTHO05D004502 7.3e-14 80.1 78 56.4
HanXRQChr14g0441821 Helianthus annuus HOM05D000372 ORTHO05D004502 7.3e-14 80.1 77 57.1
TAR110G0002 Trochodendron aralioides HOM05D000372 ORTHO05D004502 7.3e-14 80.1 70 61.4
TAR628G1126 Trochodendron aralioides HOM05D000372 ORTHO05D004502 7.3e-14 80.1 72 61.1
GSVIVG01018749001 Vitis vinifera HOM05D000372 ORTHO05D004502 7.3e-14 80.1 81 54.3
Ah.03g149030 Amaranthus hybridus HOM05D000372 ORTHO05D004502 9.6e-14 79.7 70 61.4
AL3G50850 Arabidopsis lyrata HOM05D000372 ORTHO05D004502 9.6e-14 79.7 77 57.1
MD02G1128300 Malus domestica HOM05D000372 ORTHO05D004502 9.6e-14 79.7 68 63.2
Aa31LG6G12940 Aethionema arabicum HOM05D000372 ORTHO05D004502 1.3e-13 79.3 68 63.2
CiPaw.07G060500 Carya illinoinensis HOM05D000372 ORTHO05D004502 1.3e-13 79.3 76 56.6
Lsat_1_v5_gn_2_75821 Lactuca sativa HOM05D000372 ORTHO05D004502 1.3e-13 79.3 76 57.9
Nn5g30757 Nelumbo nucifera HOM05D000372 ORTHO05D004502 1.3e-13 79.3 72 59.7
Sed0009374 Sechium edule HOM05D000372 ORTHO05D004502 1.3e-13 79.3 77 57.1
COL.COLO4_22452 Corchorus olitorius HOM05D000372 ORTHO05D004502 2.1e-13 78.6 77 57.1
Lsat_1_v5_gn_3_72520 Lactuca sativa HOM05D000372 ORTHO05D004502 2.1e-13 78.6 77 59.7
MD15G1243500 Malus domestica HOM05D000372 ORTHO05D004502 2.1e-13 78.6 68 61.8
PGR119G2511 Punica granatum HOM05D000372 ORTHO05D004502 3.6e-13 77.8 79 53.2
Atru.chr3.840 Acer truncatum HOM05D000372 ORTHO05D004502 4.8e-13 77.4 78 55.1
ECA246G2604 Erigeron canadensis HOM05D000372 ORTHO05D004502 4.8e-13 77.4 79 57.0
HanXRQChr16g0531551 Helianthus annuus HOM05D000372 ORTHO05D004502 4.8e-13 77.4 68 63.2
vmacro22145 Vaccinium macrocarpon HOM05D000372 ORTHO05D004502 4.8e-13 77.4 78 56.4
Duzib187G1535 Durio zibethinus HOM05D000372 ORTHO05D004502 6.2e-13 77.0 78 53.8
AUR62003350 Chenopodium quinoa HOM05D000372 ORTHO05D004502 1.1e-12 76.3 69 58.0
AUR62029486 Chenopodium quinoa HOM05D000372 ORTHO05D004502 1.1e-12 76.3 69 58.0
AUR62043835 Chenopodium quinoa HOM05D000372 ORTHO05D004502 1.1e-12 76.3 69 58.0
Gorai.003G008400 Gossypium raimondii HOM05D000372 ORTHO05D004502 1.1e-12 76.3 78 55.1
Gohir.D03G008200 Gossypium hirsutum HOM05D000372 ORTHO05D004502 1.4e-12 75.9 78 55.1
Actinidia22958 Actinidia chinensis HOM05D000372 ORTHO05D004502 2.4e-12 75.1 72 58.3
AagrBONN_evm.TU.Sc2ySwM_117.2594 Anthoceros agrestis HOM05D000372 ORTHO05D004502 3.1e-12 74.7 67 59.7
Pp3c5_3880 Physcomitrium patens HOM05D000372 ORTHO05D004502 3.1e-12 74.7 69 58.0
Pp3c6_20120 Physcomitrium patens HOM05D000372 ORTHO05D004502 4.0e-12 74.3 69 58.0
Gohir.A02G171900 Gossypium hirsutum HOM05D000372 ORTHO05D004502 5.3e-12 73.9 78 53.8
Aqoxy6G02190 Aquilegia oxysepala HOM05D000372 ORTHO05D004502 9.0e-12 73.2 72 56.9
Nn6g32011 Nelumbo nucifera HOM05D000372 ORTHO05D004502 9.0e-12 73.2 68 58.8
SMO139G0100 Selaginella moellendorffii HOM05D000372 ORTHO05D004502 3.4e-11 71.2 71 56.3
ATR0712G052 Amborella trichopoda HOM05D000372 ORTHO05D004502 5.8e-11 70.5 70 55.7
Mapoly0001s0444 Marchantia polymorpha HOM05D000372 ORTHO05D004502 7.6e-11 70.1 78 50.0
Aa31LG8G15050 Aethionema arabicum HOM05D000372 ORTHO05D004502 3.8e-10 67.8 80 50.0
CsaV3_3G000700 Cucumis sativus L. HOM05D000372 ORTHO05D004502 4.9e-10 67.4 68 52.9
EL10Ac6g15493 Beta vulgaris HOM05D000372 ORTHO05D004502 8.4e-10 66.6 74 51.4
MELO3C013758.2 Cucumis melo HOM05D000372 ORTHO05D004502 6.7e-07 57.0 54 51.9
Ciclev10024739m.g Citrus clementina HOM05D000372 ORTHO05D004502 1.9e-06 55.5 71 49.3
Mapoly0027s0156 Marchantia polymorpha HOM05D000372 ORTHO05D004502 1.9e-06 55.5 69 44.9
SMO139G0088 Selaginella moellendorffii HOM05D000372 ORTHO05D004502 7.4e-06 53.5 68 48.5


User provided reference genes

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