Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00679 Erythranthe guttata HOM05D000055 ORTHO05D012271 6.0e-24 113.2 53 100.0
Cfa010275 Carpinus fangiana HOM05D000055 ORTHO05D000057 3.5e-08 60.8 31 87.1
Eucgr.J00641 Eucalyptus grandis HOM05D000055 ORTHO05D000057 3.5e-08 60.8 31 87.1
MD03G1163600 Malus domestica HOM05D000055 ORTHO05D000057 3.5e-08 60.8 31 87.1
FvH4_3g27610 Fragaria vesca HOM05D000055 ORTHO05D000057 4.6e-08 60.5 31 83.9
FAN11G1078 Fragaria x ananassa HOM05D000055 ORTHO05D000057 4.6e-08 60.5 31 83.9
FAN16G3311 Fragaria x ananassa HOM05D000055 ORTHO05D000057 4.6e-08 60.5 31 83.9
FAN25G0604 Fragaria x ananassa HOM05D000055 ORTHO05D000057 4.6e-08 60.5 31 83.9
LjContig00564g0015568 Lotus japonicus HOM05D000055 ORTHO05D000057 4.6e-08 60.5 31 83.9
Prupe.6G156900 Prunus persica HOM05D000055 ORTHO05D000057 4.6e-08 60.5 31 83.9
Oeu027217.1 Olea europaea HOM05D000055 ORTHO05D000057 6.0e-08 60.1 31 87.1
arahy.Tifrunner.gnm1.ann1.EY5MJ2 Arachis hypogaea HOM05D000055 ORTHO05D000057 1.3e-07 58.9 31 83.9
arahy.Tifrunner.gnm1.ann1.KQQ5DM Arachis hypogaea HOM05D000055 ORTHO05D000057 1.3e-07 58.9 31 83.9
Cpa.g.sc103.105 Carica papaya HOM05D000055 ORTHO05D000057 1.3e-07 58.9 31 83.9
Haze_23693 Corylus avellana HOM05D000055 ORTHO05D000057 1.3e-07 58.9 31 83.9
Lalb_Chr10g0106001 Lupinus albus HOM05D000055 ORTHO05D000057 1.3e-07 58.9 31 83.9
Lalb_Chr17g0347641 Lupinus albus HOM05D000055 ORTHO05D000057 1.3e-07 58.9 31 83.9
Nn7g37170 Nelumbo nucifera HOM05D000055 ORTHO05D000057 1.3e-07 58.9 31 83.9
QL01p007381 Quercus lobata HOM05D000055 ORTHO05D000057 1.3e-07 58.9 31 83.9
ClCG02G024170 Citrullus lanatus HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 83.9
COL.COLO4_24926 Corchorus olitorius HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
Duzib150G0623 Durio zibethinus HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
Duzib170G0885 Durio zibethinus HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
Glyma.02G275900 Glycine max HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
Glyma.14G040200 Glycine max HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
Gohir.A07G118100 Gossypium hirsutum HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
Gohir.D07G122500 Gossypium hirsutum HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
Gorai.001G132200 Gossypium raimondii HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
Lalb_Chr04g0249521 Lupinus albus HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
Manes.01G175100 Manihot esculenta HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
Phvul.008G205700 Phaseolus vulgaris HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
Potri.001G222600 Populus trichocarpa HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
PGR119G2107 Punica granatum HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 83.9
Rhsim13G0201400 Rhododendron simsii HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 83.9
RcHm_v2.0_Chr5g0050061 Rosa chinensis HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
Thecc.09G255900 Theobroma cacao HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
TWI75G0868 Tripterygium wilfordii HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
TWI79G0561 Tripterygium wilfordii HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 80.6
TAR623G0787 Trochodendron aralioides HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 83.9
GSVIVG01037427001 Vitis vinifera HOM05D000055 ORTHO05D000057 1.8e-07 58.5 31 83.9
Cc01_g06690 Coffea canephora HOM05D000055 ORTHO05D000057 2.3e-07 58.2 31 80.6
DCAR_018976 Daucus carota HOM05D000055 ORTHO05D012271 2.3e-07 58.2 31 80.6
Dinv24009 Davidia involucrata HOM05D000055 ORTHO05D000057 2.3e-07 58.2 31 80.6
ECA240G2264 Erigeron canadensis HOM05D000055 ORTHO05D000057 2.3e-07 58.2 31 80.6
HanXRQChr14g0431981 Helianthus annuus HOM05D000055 ORTHO05D000057 2.3e-07 58.2 31 80.6
Lsat_1_v5_gn_2_38080 Lactuca sativa HOM05D000055 ORTHO05D000057 2.3e-07 58.2 31 80.6
Oeu063618.2 Olea europaea HOM05D000055 ORTHO05D000057 2.3e-07 58.2 31 83.9
SGA_v2.0_scaffold3G01432 Striga asiatica HOM05D000055 ORTHO05D000057 2.3e-07 58.2 31 83.9
TWI31G0713 Tripterygium wilfordii HOM05D000055 ORTHO05D000057 2.3e-07 58.2 31 83.9
VMungo0647G2462 Vigna mungo HOM05D000055 ORTHO05D000057 2.3e-07 58.2 31 80.6
Aa31LG1G13530 Aethionema arabicum HOM05D000055 ORTHO05D000057 3.0e-07 57.8 31 80.6
MSTRG.17642 Avicennia marina HOM05D000055 ORTHO05D000057 3.0e-07 57.8 31 80.6
MSTRG.21334 Avicennia marina HOM05D000055 ORTHO05D000057 3.0e-07 57.8 31 80.6
CAN.G96.2 Capsicum annuum HOM05D000055 ORTHO05D000057 3.0e-07 57.8 31 83.9
CiPaw.13G121800 Carya illinoinensis HOM05D000055 ORTHO05D000057 3.0e-07 57.8 31 83.9
MELO3C014700.2 Cucumis melo HOM05D000055 ORTHO05D000057 3.0e-07 57.8 31 83.9
Gohir.A05G072300 Gossypium hirsutum HOM05D000055 ORTHO05D000057 3.0e-07 57.8 31 80.6
Potri.009G021000 Populus trichocarpa HOM05D000055 ORTHO05D000057 3.0e-07 57.8 31 80.6
Sed0007958 Sechium edule HOM05D000055 ORTHO05D000057 3.0e-07 57.8 31 83.9
Sc06g0010560 Simmondsia chinensis HOM05D000055 ORTHO05D000057 3.0e-07 57.8 31 83.9
Manes.02G133600 Manihot esculenta HOM05D000055 ORTHO05D000057 3.9e-07 57.4 31 77.4
Sabra16G0132200 Salix brachista HOM05D000055 ORTHO05D003790 3.9e-07 57.4 31 77.4
THA.LOC104815091 Tarenaya hassleriana HOM05D000055 ORTHO05D000057 3.9e-07 57.4 31 80.6
Ciclev10015272m.g Citrus clementina HOM05D000055 ORTHO05D000057 5.1e-07 57.0 31 77.4
CsaV3_4G017300 Cucumis sativus L. HOM05D000055 ORTHO05D000057 6.7e-07 56.6 31 80.6
Gohir.A09G107500 Gossypium hirsutum HOM05D000055 ORTHO05D000057 6.7e-07 56.6 31 77.4
Gohir.D09G104300 Gossypium hirsutum HOM05D000055 ORTHO05D000057 6.7e-07 56.6 31 77.4
Gorai.006G121600 Gossypium raimondii HOM05D000055 ORTHO05D000057 6.7e-07 56.6 31 77.4
Nitab4.5_0013347g0020 Nicotiana tabacum HOM05D000055 ORTHO05D000057 6.7e-07 56.6 31 80.6
Oeu013458.1 Olea europaea HOM05D000055 ORTHO05D000057 6.7e-07 56.6 31 80.6
Sabra09G0011300 Salix brachista HOM05D000055 ORTHO05D000057 6.7e-07 56.6 31 80.6
Solyc11g062410.3 Solanum lycopersicum HOM05D000055 ORTHO05D000057 6.7e-07 56.6 31 80.6
Sopen11g024680 Solanum pennellii HOM05D000055 ORTHO05D000057 6.7e-07 56.6 31 80.6
PGSC0003DMG400032508 Solanum tuberosum HOM05D000055 ORTHO05D000057 6.7e-07 56.6 31 80.6
CiPaw.14G089100 Carya illinoinensis HOM05D000055 ORTHO05D000057 8.7e-07 56.2 31 80.6
Gohir.D05G075100 Gossypium hirsutum HOM05D000055 ORTHO05D000057 1.1e-06 55.8 31 80.6
Gorai.009G076400 Gossypium raimondii HOM05D000055 ORTHO05D000057 1.1e-06 55.8 31 80.6
MBI19_g10818_MAGBIO Magnolia biondii HOM05D000055 ORTHO05D000057 1.1e-06 55.8 31 80.6
Nitab4.5_0000718g0210 Nicotiana tabacum HOM05D000055 ORTHO05D000057 1.1e-06 55.8 31 77.4
Medtr5g088350 Medicago truncatula HOM05D000055 ORTHO05D000057 1.5e-06 55.5 31 77.4
Peaxi162Scf00791g10011 Petunia axillaris HOM05D000055 ORTHO05D000057 1.5e-06 55.5 31 77.4
TPR.G11312 Trifolium pratense HOM05D000055 ORTHO05D000057 1.5e-06 55.5 31 77.4
TAR633G1562 Trochodendron aralioides HOM05D000055 ORTHO05D000057 1.5e-06 55.5 31 77.4
ATR1096G137 Amborella trichopoda HOM05D000055 ORTHO05D000057 1.9e-06 55.1 31 77.4
MSTRG.12432 Avicennia marina HOM05D000055 ORTHO05D000057 1.9e-06 55.1 31 77.4
Phvul.006G020900 Phaseolus vulgaris HOM05D000055 ORTHO05D000057 2.5e-06 54.7 31 77.4
Sed0022640 Sechium edule HOM05D000055 ORTHO05D000057 2.5e-06 54.7 31 80.6
Solyc01g008850.3 Solanum lycopersicum HOM05D000055 ORTHO05D000057 2.5e-06 54.7 31 74.2
Sopen01g004360 Solanum pennellii HOM05D000055 ORTHO05D000057 2.5e-06 54.7 31 74.2
PGSC0003DMG400022711 Solanum tuberosum HOM05D000055 ORTHO05D000057 2.5e-06 54.7 31 74.2
VMungo0540G2131 Vigna mungo HOM05D000055 ORTHO05D012318 2.5e-06 54.7 31 77.4
Actinidia06999 Actinidia chinensis HOM05D000055 ORTHO05D000057 3.3e-06 54.3 31 74.2
CSS0003876 Camellia sinensis var. sinensis HOM05D000055 ORTHO05D000057 3.3e-06 54.3 31 77.4
Peaxi162Scf00032g02720 Petunia axillaris HOM05D000055 ORTHO05D000057 3.3e-06 54.3 31 74.2
Hund08104 Selenicereus undatus HOM05D000055 ORTHO05D000057 3.3e-06 54.3 31 77.4
Aqoxy1G00105 Aquilegia oxysepala HOM05D000055 ORTHO05D000057 4.3e-06 53.9 31 74.2
CAN.G379.1 Capsicum annuum HOM05D000055 ORTHO05D000057 4.3e-06 53.9 31 74.2
Eucgr.B03773 Eucalyptus grandis HOM05D000055 ORTHO05D000057 4.3e-06 53.9 31 77.4
MSTRG.18473 Avicennia marina HOM05D000055 ORTHO05D000057 5.6e-06 53.5 31 71.0
BcaB08g36473 Brassica carinata HOM05D000055 ORTHO05D000057 7.4e-06 53.1 31 71.0
Os12g0132200 Oryza sativa ssp. japonica HOM05D000055 ORTHO05D000057 7.4e-06 53.1 31 77.4
Ah.01g003490 Amaranthus hybridus HOM05D000055 ORTHO05D000057 9.6e-06 52.8 31 77.4
EL10Ac9g22342 Beta vulgaris HOM05D000055 ORTHO05D000057 9.6e-06 52.8 31 77.4
BNapus_Darmor_BZH_scaffold_38p01030 Brassica napus HOM05D000055 ORTHO05D000057 9.6e-06 52.8 31 67.7
BolC2t07113H Brassica oleracea HOM05D000055 ORTHO05D000057 9.6e-06 52.8 31 67.7
CANSAT54G2075 Cannabis sativa HOM05D000055 ORTHO05D000057 9.6e-06 52.8 32 81.2
AUR62025068 Chenopodium quinoa HOM05D000055 ORTHO05D000057 9.6e-06 52.8 31 77.4
AUR62037145 Chenopodium quinoa HOM05D000055 ORTHO05D000057 9.6e-06 52.8 31 77.4
Sp6g23320 Schrenkiella parvula HOM05D000055 ORTHO05D000057 9.6e-06 52.8 31 67.7
HPP92_028458 Vanilla planifolia HOM05D000055 ORTHO05D000057 9.6e-06 52.8 28 82.1


User provided reference genes

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