Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 7.6e-239 830.1 421 100.0
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 3.2e-237 824.7 421 99.0
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 3.2e-184 648.7 419 74.7
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 1.2e-183 646.7 423 74.9
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 1.6e-183 646.4 414 77.1
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 3.0e-182 642.1 412 76.2
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 1.2e-180 636.7 410 75.4
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 4.7e-180 634.8 410 75.4
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 1.1e-179 633.6 410 74.1
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 1.8e-179 632.9 419 74.2
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 4.0e-179 631.7 417 73.1
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 6.8e-179 630.9 419 72.8
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 2.0e-178 629.4 419 72.6
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 9.8e-178 627.1 419 72.8
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 1.3e-177 626.7 416 72.6
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 2.9e-177 625.5 413 72.6
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 3.7e-177 625.2 414 72.9
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 3.2e-176 622.1 501 63.9
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 4.1e-176 621.7 419 72.3
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 3.5e-175 618.6 414 72.5
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 3.5e-175 618.6 419 70.9
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 4.6e-175 618.2 419 71.4
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 1.7e-174 616.3 437 70.3
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 3.9e-174 615.1 410 72.2
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 5.0e-174 614.8 452 70.4
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 8.6e-174 614.0 410 71.2
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 1.9e-173 612.8 441 69.4
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 4.3e-173 611.7 406 71.7
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 6.2e-172 607.8 464 67.9
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 1.4e-171 606.7 416 70.7
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 1.8e-171 606.3 412 70.9
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 8.9e-171 604.0 416 70.2
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 8.9e-171 604.0 408 73.0
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 2.6e-170 602.4 419 69.9
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 3.4e-170 602.1 359 83.0
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 5.8e-170 601.3 408 71.1
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 5.8e-170 601.3 410 70.2
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 7.5e-170 600.9 410 69.5
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 2.9e-169 599.0 419 69.0
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 4.9e-169 598.2 449 65.9
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 6.4e-169 597.8 412 69.9
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 2.4e-168 595.9 417 69.5
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 5.4e-168 594.7 419 69.0
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 3.5e-167 592.0 411 71.3
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 1.3e-166 590.1 420 69.3
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 6.6e-166 587.8 412 69.9
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.5e-165 586.6 408 70.1
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 2.5e-165 585.9 419 66.8
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 3.3e-165 585.5 419 67.8
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 6.2e-164 581.3 421 67.0
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 8.1e-164 580.9 419 66.3
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 1.1e-163 580.5 369 75.3
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 3.1e-163 578.9 417 68.1
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 4.0e-163 578.6 425 66.6
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.5e-162 576.6 419 68.5
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.5e-162 576.6 419 68.5
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 9.9e-162 573.9 494 59.9
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 1.2e-159 567.0 374 74.1
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 1.3e-158 563.5 435 64.4
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 3.0e-158 562.4 360 73.6
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 8.6e-158 560.8 395 69.9
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 7.3e-157 557.8 416 65.4
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 1.2e-156 557.0 428 63.8
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 6.4e-153 544.7 416 66.3
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 5.4e-152 541.6 401 65.1
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 3.9e-150 535.4 334 79.0
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 6.6e-150 534.6 419 62.5
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 1.4e-147 526.9 410 63.9
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 9.0e-147 524.2 410 64.4
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 2.6e-146 522.7 341 73.6
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 1.0e-142 510.8 363 69.1
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 8.7e-142 507.7 350 71.1
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 2.4e-139 499.6 402 64.7
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 4.6e-135 485.3 427 58.3
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 1.2e-130 470.7 440 59.1
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 5.9e-122 441.8 292 74.3
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 7.4e-117 424.9 277 75.1
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 3.4e-114 416.0 422 49.8
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 7.7e-114 414.8 402 52.0
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 1.3e-113 414.1 275 71.3
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.2e-113 413.3 277 70.8
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 4.7e-111 405.6 276 71.4
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 1.5e-109 400.6 415 48.9
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.9e-105 386.3 423 48.5
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 2.1e-103 380.2 410 48.5
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 3.3e-101 372.9 274 70.1
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 1.0e-97 361.3 278 62.2
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 4.7e-95 352.4 401 45.9
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 2.2e-89 333.6 557 37.9
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 1.9e-88 330.5 317 53.6
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 8.0e-87 325.1 303 56.8
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 1.4e-86 324.3 429 40.8
PGSC0003DMG400029189 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.2e-85 321.2 426 40.8
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 9.8e-85 318.2 413 42.9
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 1.7e-84 317.4 458 40.4
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 3.7e-84 316.2 265 61.1
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 5.9e-82 308.9 416 40.4
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.7e-81 307.4 420 40.0
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 3.8e-81 306.2 201 75.6
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 3.6e-79 299.7 426 39.2
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.5e-72 276.9 415 39.5
FAN17G2566 Fragaria x ananassa HOM05D005467 ORTHO05D006523 4.9e-68 262.7 188 67.0
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 4.4e-61 239.6 427 34.9
Solyc02g038650.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 6.4e-60 235.7 353 38.0
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 2.1e-58 230.7 152 75.0
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 2.8e-55 220.3 168 67.9
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 1.8e-54 217.6 365 37.8
Haze_11050 Corylus avellana HOM05D005467 ORTHO05D006523 2.6e-53 213.8 200 56.0
PRCOL_00002109 Prasinoderma coloniale HOM05D005467 ORTHO05D006523 1.7e-52 211.1 390 34.9
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 1.0e-49 201.8 434 32.3
PGSC0003DMG400029188 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.2e-47 194.9 328 36.3
Sopen02g012080 Solanum pennellii HOM05D005467 ORTHO05D006523 4.4e-45 186.4 414 31.4
Lsat_1_v5_gn_3_86380 Lactuca sativa HOM05D005467 ORTHO05D006523 2.1e-42 177.6 117 75.2
Sed0021963 Sechium edule HOM05D005467 ORTHO05D006523 1.3e-41 174.9 273 41.4
Nitab4.5_0004524g0050 Nicotiana tabacum HOM05D005467 ORTHO05D006523 9.6e-40 168.7 116 67.2
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 4.0e-38 163.3 329 33.1
Lsat_1_v5_gn_3_107041 Lactuca sativa HOM05D005467 ORTHO05D006523 5.3e-38 162.9 208 48.6
RcHm_v2.0_Chr7g0235151 Rosa chinensis HOM05D005467 ORTHO05D006523 6.9e-38 162.5 104 75.0
FAN17G1461 Fragaria x ananassa HOM05D005467 ORTHO05D006523 2.1e-34 151.0 112 64.3
Nitab4.5_0004367g0150 Nicotiana tabacum HOM05D005467 ORTHO05D006523 6.0e-34 149.4 133 52.6
PGSC0003DMG400023165 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.5e-32 144.8 182 42.9
Nitab4.5_0019054g0020 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.9e-32 144.4 276 35.5
Nitab4.5_0002820g0080 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.1e-31 141.0 122 53.3
Lsat_1_v5_gn_4_96160 Lactuca sativa HOM05D005467 ORTHO05D006523 2.8e-31 140.6 95 70.5
Lsat_1_v5_gn_7_58700 Lactuca sativa HOM05D005467 ORTHO05D006523 3.6e-31 140.2 95 70.5
PGSC0003DMG400017876 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.6e-29 134.0 206 37.4
RcHm_v2.0_Chr3g0493761 Rosa chinensis HOM05D005467 ORTHO05D006523 1.4e-27 128.3 85 72.9
Nitab4.5_0000688g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 7.1e-27 125.9 189 39.2
Solyc02g038700.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 9.3e-27 125.6 227 34.4
Nitab4.5_0002820g0070 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.7e-26 124.0 148 46.6
Lsat_1_v5_gn_6_22900 Lactuca sativa HOM05D005467 ORTHO05D006523 7.6e-21 105.9 76 69.7
Phvul.008G137000 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 2.2e-20 104.4 55 85.5
PGSC0003DMG400017875 Solanum tuberosum HOM05D005467 ORTHO05D006523 3.0e-17 94.0 77 55.8
CDE07G1108 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 2.8e-15 87.4 79 51.9
PGSC0003DMG400038827 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.0e-13 81.3 104 35.6
SEGI_39271 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 1.2e-10 72.0 85 50.6
Cre12.g549600 Chlamydomonas reinhardtii HOM05D005467 ORTHO05D006523 1.6e-10 71.6 264 25.0
MD05G1282800 Malus domestica HOM05D005467 ORTHO05D006523 6.3e-07 59.7 180 28.3
Solyc02g062200.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 3.1e-06 57.4 83 37.3
arahy.Tifrunner.gnm1.ann1.68D7VA Arachis hypogaea HOM05D007334 ORTHO05D011873 6.9e-06 56.2 57 50.9
Lsat_1_v5_gn_9_124480 Lactuca sativa HOM05D001159 ORTHO05D001712 9.0e-06 55.8 44 52.3


User provided reference genes

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