Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 1.2e-138 496.5 253 100.0
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 5.5e-91 338.2 231 74.9
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 1.9e-75 286.6 224 62.9
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 4.2e-75 285.4 228 64.5
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 4.2e-75 285.4 223 63.7
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 2.1e-74 283.1 225 62.7
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 2.7e-74 282.7 225 64.0
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 2.7e-74 282.7 225 62.7
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 6.1e-74 281.6 236 60.6
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 1.0e-73 280.8 225 64.0
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 1.1e-72 277.3 223 65.0
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 1.1e-72 277.3 225 64.4
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 3.3e-72 275.8 237 60.3
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 4.4e-72 275.4 225 61.3
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 4.4e-72 275.4 226 62.4
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 4.4e-72 275.4 232 62.9
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 4.4e-72 275.4 222 62.2
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 5.7e-72 275.0 230 60.9
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 1.3e-71 273.9 239 58.2
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 1.7e-71 273.5 227 59.9
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 1.4e-70 270.4 229 62.0
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 1.4e-70 270.4 198 68.7
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 3.1e-70 269.2 223 60.1
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 4.1e-70 268.9 212 64.6
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 5.3e-70 268.5 230 60.4
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 9.1e-70 267.7 233 61.8
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 1.2e-69 267.3 232 59.1
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 1.6e-69 266.9 213 62.9
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 2.6e-69 266.2 199 67.8
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 1.7e-68 263.5 223 56.5
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 6.5e-68 261.5 222 60.4
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 5.5e-67 258.5 224 58.0
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 5.5e-67 258.5 224 60.7
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 7.2e-67 258.1 221 57.5
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 1.2e-66 257.3 221 59.3
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 4.7e-66 255.4 225 56.9
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 2.3e-65 253.1 199 62.8
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 5.2e-65 251.9 221 58.4
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 4.4e-64 248.8 229 57.2
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 5.7e-64 248.4 221 57.9
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 9.7e-64 247.7 221 56.6
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 4.8e-63 245.4 234 55.1
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 6.3e-63 245.0 221 56.1
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 1.4e-62 243.8 223 57.0
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 9.1e-62 241.1 223 57.0
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 1.2e-61 240.7 199 62.8
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 2.7e-61 239.6 211 57.8
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 2.2e-60 236.5 243 49.8
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 8.5e-60 234.6 168 68.5
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 1.9e-59 233.4 223 56.1
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 2.1e-58 229.9 217 56.2
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 3.6e-58 229.2 223 55.6
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 4.7e-58 228.8 225 55.6
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 1.5e-56 223.8 233 50.2
Atru.chr11.1007 Acer truncatum HOM05D007520 ORTHO05D009417 2.6e-56 223.0 173 65.9
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 9.8e-56 221.1 232 49.6
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 1.4e-54 217.2 197 59.9
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 1.4e-54 217.2 197 59.9
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 4.1e-54 215.7 201 56.7
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 5.4e-54 215.3 227 52.0
Lalb_Chr10g0094861 Lupinus albus HOM05D007520 ORTHO05D009417 1.7e-52 210.3 183 59.6
Lsat_1_v5_gn_5_170921 Lactuca sativa HOM05D007520 ORTHO05D009417 5.0e-52 208.8 202 55.4
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 1.9e-51 206.8 224 53.1
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 4.0e-49 199.1 203 45.3
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 1.2e-45 187.6 157 59.9
SalBow4G2630 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.2e-45 187.6 128 71.9
MSTRG.8107 Avicennia marina HOM05D007520 ORTHO05D009417 5.0e-44 182.2 123 75.6
SalBow3G0394 Salvia bowleyana HOM05D007520 ORTHO05D009417 7.3e-43 178.3 115 75.7
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 2.1e-42 176.8 182 48.4
Atru.BG.295.p Acer truncatum HOM05D007520 ORTHO05D009417 6.1e-42 175.3 130 66.2
Dinv08902 Davidia involucrata HOM05D007520 ORTHO05D009417 5.2e-41 172.2 135 65.9
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 2.0e-40 170.2 168 54.8
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 3.7e-39 166.0 114 71.1
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 4.9e-39 165.6 225 43.6
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 1.4e-38 164.1 225 42.7
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 6.0e-37 158.7 120 65.0
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 6.0e-37 158.7 120 65.0
Cc11_g05730 Coffea canephora HOM05D007520 ORTHO05D009417 6.0e-37 158.7 117 65.8
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 5.6e-35 152.1 171 52.6
Hma1.2p1_0095F.1_g047530 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 3.6e-34 149.4 227 43.6
SalBow6G7185 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.8e-33 147.1 101 71.3
CSS0024703 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.4e-30 137.5 136 53.7
PGSC0003DMG400013121 Solanum tuberosum HOM05D007520 ORTHO05D009417 2.4e-30 136.7 118 58.5
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 3.2e-30 136.3 115 57.4
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 7.0e-30 135.2 126 54.8
GSVIVG01011596001 Vitis vinifera HOM05D007520 ORTHO05D009417 3.5e-29 132.9 106 62.3
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 7.8e-29 131.7 109 59.6
SalBow2G3493 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.0e-28 131.3 89 71.9
Lj3A859T72 Lonicera japonica HOM05D007520 ORTHO05D009417 3.0e-28 129.8 128 57.8
Carub.0005s0089 Capsella rubella HOM05D007520 ORTHO05D009417 8.1e-26 121.7 120 53.3
CSS0003025 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 1.1e-25 121.3 136 48.5
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 4.0e-25 119.4 127 50.4
Dinv08901 Davidia involucrata HOM05D007520 ORTHO05D009417 6.8e-25 118.6 71 77.5
Mapoly0059s0009 Marchantia polymorpha HOM05D007520 ORTHO05D009417 6.4e-23 112.1 228 30.3
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 1.0e-20 104.8 107 48.6
Haze_10814 Corylus avellana HOM05D007520 ORTHO05D009417 6.6e-20 102.1 73 68.5
Pp3c10_19450 Physcomitrium patens HOM05D007520 ORTHO05D009417 7.3e-19 98.6 163 31.3
CSS0008274 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 8.1e-18 95.1 65 69.2
Eucgr.B02652 Eucalyptus grandis HOM05D007520 ORTHO05D009417 8.1e-18 95.1 74 59.5
AUR62026615 Chenopodium quinoa HOM05D007520 ORTHO05D009417 1.5e-16 90.9 107 43.0
AUR62032185 Chenopodium quinoa HOM05D007520 ORTHO05D009417 6.4e-15 85.5 91 45.1
HPP92_016406 Vanilla planifolia HOM05D007520 ORTHO05D009417 1.1e-14 84.7 71 59.2
AUR62033544 Chenopodium quinoa HOM05D000122 ORTHO05D009417 2.6e-08 63.5 82 40.2


User provided reference genes

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