Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 0.0e+00 1507.7 799 100.0
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 4.0e-273 944.9 822 65.0
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 2.7e-261 905.6 825 62.3
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 3.6e-253 878.6 820 62.3
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.8e-252 876.3 562 87.4
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 3.7e-250 868.6 818 59.5
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 5.3e-249 864.8 777 61.8
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 6.5e-247 857.8 813 60.6
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 7.2e-246 854.4 807 60.5
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 5.1e-244 848.2 810 59.5
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 2.6e-243 845.9 818 58.7
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 4.1e-241 838.6 781 60.3
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 5.3e-241 838.2 813 58.7
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 5.9e-240 834.7 817 59.0
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 5.0e-239 831.6 806 59.8
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 6.5e-239 831.2 789 59.6
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 1.6e-237 826.6 848 56.4
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 2.1e-237 826.2 812 58.4
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 2.1e-237 826.2 826 56.9
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 7.5e-235 817.8 822 57.9
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.3e-234 817.0 826 56.7
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 2.8e-234 815.8 812 57.4
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 9.1e-233 810.8 826 56.4
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 1.2e-232 810.4 848 55.2
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 2.7e-232 809.3 820 57.8
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 7.7e-232 807.7 812 57.1
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 7.7e-232 807.7 801 57.8
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 2.2e-231 806.2 811 57.0
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 5.0e-231 805.1 797 56.8
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 2.5e-230 802.7 783 58.4
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 5.5e-230 801.6 817 55.4
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 1.2e-229 800.4 805 56.1
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 4.7e-229 798.5 812 57.5
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 5.2e-228 795.0 759 58.9
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 9.8e-227 790.8 799 56.8
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 2.8e-226 789.3 868 53.0
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 1.1e-225 787.3 836 55.5
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 5.4e-225 785.0 792 56.9
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 3.8e-223 778.9 761 58.3
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 8.5e-223 777.7 815 54.8
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 1.4e-220 770.4 803 55.7
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 6.8e-220 768.1 788 55.6
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 1.2e-219 767.3 809 53.8
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 2.6e-219 766.1 792 56.2
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 7.5e-219 764.6 741 58.2
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 3.7e-218 762.3 806 53.8
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 4.9e-218 761.9 775 55.2
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 1.1e-217 760.8 780 55.3
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 1.4e-217 760.4 782 54.9
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 4.1e-217 758.8 791 54.9
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 1.2e-216 757.3 766 56.4
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 2.7e-216 756.1 792 56.1
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 5.9e-216 755.0 771 56.2
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 1.9e-214 750.0 788 54.4
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 3.3e-214 749.2 807 54.2
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 5.6e-214 748.4 811 52.7
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 9.5e-214 747.7 764 55.5
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 1.2e-213 747.3 808 53.2
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.2e-213 747.3 822 51.9
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 1.0e-212 744.2 807 52.8
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 2.3e-212 743.0 762 55.1
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 2.0e-211 740.0 763 54.3
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 2.6e-211 739.6 803 54.7
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 5.7e-211 738.4 791 53.1
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 7.5e-211 738.0 774 54.5
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 9.8e-211 737.6 791 53.1
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 1.7e-210 736.9 732 56.8
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.2e-210 736.5 812 54.3
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 4.9e-210 735.3 780 54.2
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 2.0e-208 729.9 769 54.5
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 1.9e-206 723.4 816 52.2
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 5.6e-206 721.8 783 54.4
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 2.3e-204 716.5 763 53.5
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 6.8e-204 714.9 779 52.4
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 2.0e-203 713.4 808 53.0
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 9.8e-203 711.1 815 51.3
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 3.6e-197 692.6 863 48.4
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 1.1e-196 691.0 768 51.7
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 5.2e-196 688.7 787 53.4
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 3.4e-195 686.0 818 52.2
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 3.2e-193 679.5 812 50.2
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.5e-190 669.8 716 53.1
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 7.3e-190 668.3 777 49.5
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.0e-187 660.2 793 48.0
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 6.6e-183 645.2 594 63.3
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 2.4e-177 626.7 644 56.4
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 1.2e-171 607.8 810 43.6
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 1.5e-171 607.4 768 47.7
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 8.4e-162 575.1 804 43.4
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.3e-157 561.2 514 62.5
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 1.6e-157 560.8 516 60.3
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.1e-156 558.1 475 63.8
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.8e-148 530.8 716 46.1
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 5.5e-145 519.2 605 51.9
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 3.6e-144 516.5 784 45.7
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 6.7e-143 512.3 457 60.0
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 2.1e-136 490.7 617 47.2
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 1.7e-130 471.1 515 51.7
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 4.7e-128 463.0 872 38.6
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 1.8e-127 461.1 515 51.3
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 7.0e-116 422.5 574 47.0
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 1.7e-106 391.3 847 33.9
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 3.7e-93 347.1 240 74.6
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 5.9e-91 339.7 777 32.8
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 8.6e-82 309.3 357 46.8
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.0e-78 298.1 274 60.2
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.0e-78 298.1 268 59.3
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 9.2e-68 262.7 628 31.7
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 6.0e-67 260.0 220 62.7
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 1.1e-65 255.8 202 67.3
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.3e-57 227.3 225 61.3
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 9.9e-54 216.1 289 45.3
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 8.4e-53 213.0 849 25.9
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 2.6e-17 95.1 136 44.9
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 1.2e-11 76.3 68 57.4
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 3.0e-10 71.6 109 44.0
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 6.7e-10 70.5 110 41.8


User provided reference genes

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