Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 2.5e-68 261.9 128 100.0
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 4.0e-66 254.6 128 97.7
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 3.2e-55 218.4 128 80.5
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 4.2e-55 218.0 128 84.4
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.0e-53 213.4 128 78.1
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 2.3e-53 212.2 128 78.9
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 3.9e-53 211.5 128 79.7
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 6.7e-53 210.7 128 78.9
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 8.7e-53 210.3 128 80.5
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 8.7e-53 210.3 128 80.5
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 1.1e-52 209.9 128 81.2
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 1.5e-52 209.5 128 80.5
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 1.9e-52 209.1 128 77.3
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 1.9e-52 209.1 128 77.3
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 3.3e-52 208.4 128 80.5
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 5.7e-52 207.6 128 78.9
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 7.4e-52 207.2 128 79.7
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 7.4e-52 207.2 128 78.1
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 7.4e-52 207.2 128 75.8
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 1.3e-51 206.5 128 80.5
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 1.6e-51 206.1 127 81.1
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 3.7e-51 204.9 129 78.3
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 3.7e-51 204.9 128 78.1
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 3.7e-51 204.9 128 79.7
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 6.2e-51 204.1 128 75.0
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 6.2e-51 204.1 127 74.8
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 8.2e-51 203.8 128 79.7
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 8.2e-51 203.8 128 78.1
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 1.1e-50 203.4 128 77.3
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 1.1e-50 203.4 127 74.0
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 1.4e-50 203.0 129 77.5
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 1.4e-50 203.0 128 78.1
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 1.8e-50 202.6 127 75.6
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 1.8e-50 202.6 129 77.5
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 1.8e-50 202.6 129 77.5
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 1.8e-50 202.6 129 77.5
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 1.8e-50 202.6 129 77.5
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 2.4e-50 202.2 128 77.3
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 3.1e-50 201.8 128 77.3
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 3.1e-50 201.8 129 77.5
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 3.1e-50 201.8 128 78.1
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 3.1e-50 201.8 128 78.9
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 4.1e-50 201.4 129 77.5
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 5.3e-50 201.1 127 78.0
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 1.2e-49 199.9 127 75.6
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 2.0e-49 199.1 130 78.5
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 2.0e-49 199.1 130 78.5
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 2.0e-49 199.1 128 75.0
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 2.6e-49 198.7 128 75.0
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 2.6e-49 198.7 127 75.6
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 2.6e-49 198.7 129 76.0
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 3.4e-49 198.4 130 77.7
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 3.4e-49 198.4 130 77.7
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 4.5e-49 198.0 128 76.6
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 5.8e-49 197.6 128 76.6
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 5.8e-49 197.6 126 75.4
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 7.6e-49 197.2 128 77.3
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 1.0e-48 196.8 127 75.6
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 1.0e-48 196.8 129 76.0
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 1.0e-48 196.8 129 76.0
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 1.3e-48 196.4 127 76.4
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 1.3e-48 196.4 128 74.2
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 2.2e-48 195.7 127 75.6
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 2.9e-48 195.3 128 72.7
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 2.9e-48 195.3 128 77.3
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 6.5e-48 194.1 130 76.2
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 6.5e-48 194.1 128 72.7
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 8.4e-48 193.7 129 74.4
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 8.4e-48 193.7 127 74.0
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 8.4e-48 193.7 127 74.0
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 1.1e-47 193.4 128 73.4
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.4e-47 193.0 127 74.0
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 2.5e-47 192.2 128 74.2
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 3.2e-47 191.8 128 75.0
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 3.2e-47 191.8 128 75.0
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 3.2e-47 191.8 126 73.0
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 4.2e-47 191.4 127 73.2
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.2e-47 191.4 127 73.2
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 9.3e-47 190.3 124 76.6
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 1.2e-46 189.9 128 73.4
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 1.2e-46 189.9 128 72.7
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 1.6e-46 189.5 128 73.4
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 2.1e-46 189.1 128 74.2
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 2.1e-46 189.1 127 74.0
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 2.7e-46 188.7 124 72.6
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 2.7e-46 188.7 124 76.6
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 3.5e-46 188.3 124 71.0
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 1.0e-45 186.8 128 72.7
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 1.3e-45 186.4 129 72.1
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.3e-44 181.4 127 69.3
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 4.3e-44 181.4 128 69.5
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 1.3e-43 179.9 122 70.5
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 1.1e-42 176.8 129 67.4
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 5.9e-41 171.0 123 67.5
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 1.0e-40 170.2 114 76.3
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 3.8e-40 168.3 128 69.5
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 2.1e-38 162.5 96 79.2
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 6.7e-37 157.5 102 73.5
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 8.8e-37 157.1 119 66.4
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.5e-36 155.6 148 58.1
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 1.7e-35 152.9 120 60.0
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 2.2e-35 152.5 121 67.8
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 2.0e-33 146.0 126 62.7
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.0e-32 143.7 148 56.1
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 1.9e-31 139.4 126 58.7
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 5.5e-31 137.9 121 62.8
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 1.6e-30 136.3 101 69.3
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 2.1e-30 136.0 87 73.6
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 3.6e-30 135.2 129 59.7
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 1.4e-29 133.3 128 58.6
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 2.6e-28 129.0 86 69.8
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 2.2e-27 125.9 87 69.0
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 1.5e-23 113.2 96 60.4
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 4.7e-22 108.2 95 56.8
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 2.6e-20 102.4 128 47.7
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 3.7e-19 98.6 117 45.3
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 9.1e-18 94.0 122 46.7
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 2.0e-17 92.8 62 71.0
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 2.9e-16 89.0 62 67.7
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 4.2e-15 85.1 119 40.3
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 2.1e-14 82.8 128 42.2
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 3.6e-14 82.0 68 60.3
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 1.7e-11 73.2 44 77.3
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 1.0e-08 63.9 42 78.6
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 8.5e-08 60.8 32 90.6


User provided reference genes

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