Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00537 Erythranthe guttata HOM05D008299 ORTHO05D010400 2.2e-23 111.3 50 100.0
CAN.G1648.16 Capsicum annuum HOM05D008299 ORTHO05D010400 1.7e-20 101.7 49 89.8
CAN.G343.2 Capsicum annuum HOM05D000445 ORTHO05D010400 1.7e-20 101.7 49 89.8
CAN.G1298.15 Capsicum annuum HOM05D008299 ORTHO05D010400 2.9e-20 100.9 49 89.8
Solyc11g018700.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.9e-20 100.9 49 89.8
CSS0008439 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 3.8e-20 100.5 50 90.0
CSS0021182 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 3.8e-20 100.5 50 90.0
CAN.G219.11 Capsicum annuum HOM05D000445 ORTHO05D010400 8.5e-20 99.4 49 87.8
CAN.G100.36 Capsicum annuum HOM05D008299 ORTHO05D010400 1.2e-18 95.5 49 85.7
Solyc00g500038.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.6e-18 95.1 47 87.2
Solyc00g500045.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.6e-18 95.1 47 87.2
Solyc00g500082.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.6e-18 95.1 47 87.2
Solyc00g500127.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.6e-18 95.1 47 87.2
Solyc00g500197.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.6e-18 95.1 47 87.2
Solyc00g500300.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.6e-18 95.1 47 87.2
Solyc00g500326.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.6e-18 95.1 47 87.2
CAN.G719.1 Capsicum annuum HOM05D008299 ORTHO05D010400 2.1e-18 94.7 49 83.7
Solyc11g021080.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.0e-17 92.4 49 81.6
CAN.G129.17 Capsicum annuum HOM05D008299 ORTHO05D010400 1.8e-17 91.7 49 81.6
Solyc01g017080.2 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.0e-17 90.9 49 77.6
Solyc01g017150.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.0e-16 88.2 49 75.5
Solyc02g011920.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.5e-16 87.8 49 77.6
SGA_v2.0_scaffold379G50347 Striga asiatica HOM05D008299 ORTHO05D010400 2.8e-15 84.3 50 76.0
Solyc03g058240.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.6e-13 77.8 49 71.4
RcHm_v2.0_Chr5g0051131 Rosa chinensis HOM05D008299 ORTHO05D010400 1.0e-09 65.9 34 79.4
RcHm_v2.0_CPg0501791 Rosa chinensis HOM05D008299 ORTHO05D010400 1.0e-09 65.9 34 79.4
RcHm_v2.0_CPg0502621 Rosa chinensis HOM05D008299 ORTHO05D010400 1.0e-09 65.9 34 79.4
Gohir.A09G103316 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.2e-07 58.2 30 83.3
ClCG00G002340 Citrullus lanatus HOM05D008299 ORTHO05D010400 8.2e-07 56.2 30 76.7
Potri.019G028450 Populus trichocarpa HOM05D008299 ORTHO05D010400 3.1e-06 54.3 36 69.4


User provided reference genes

Program Settings