Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00524 Erythranthe guttata HOM05D003519 ORTHO05D004443 7.7e-291 1003.0 491 100.0
Migut.L00387 Erythranthe guttata HOM05D003519 ORTHO05D004443 5.3e-191 671.4 542 65.5
Migut.L00389 Erythranthe guttata HOM05D003519 ORTHO05D004443 9.7e-177 624.0 534 63.1
Migut.L00388 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.9e-172 609.8 538 62.1
Migut.L00386 Erythranthe guttata HOM05D003519 ORTHO05D004443 5.2e-162 575.1 427 69.8
SalBow5G2644 Salvia bowleyana HOM05D003519 ORTHO05D004443 2.5e-156 556.2 615 51.7
Migut.L00390 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.1e-148 530.8 595 51.4
Migut.L00523 Erythranthe guttata HOM05D003519 ORTHO05D004443 2.1e-147 526.6 593 51.6
Migut.L00374 Erythranthe guttata HOM05D003519 ORTHO05D004443 5.7e-145 518.5 559 53.3
Migut.L00372 Erythranthe guttata HOM05D003519 ORTHO05D004443 5.9e-142 508.4 589 50.3
Migut.L00383 Erythranthe guttata HOM05D003519 ORTHO05D004443 5.9e-142 508.4 589 50.4
MSTRG.15264 Avicennia marina HOM05D003519 ORTHO05D004443 7.8e-142 508.1 615 48.0
Migut.O00452 Erythranthe guttata HOM05D003519 ORTHO05D004443 7.8e-142 508.1 589 50.3
SGA_v2.0_scaffold3G01832 Striga asiatica HOM05D003519 ORTHO05D004443 1.1e-140 504.2 610 47.4
Thecc.01G137200 Theobroma cacao HOM05D003519 ORTHO05D004443 7.0e-135 485.0 614 44.1
Actinidia06577 Actinidia chinensis HOM05D003519 ORTHO05D004443 9.2e-135 484.6 612 45.6
CSS0008781 Camellia sinensis var. sinensis HOM05D003519 ORTHO05D004443 1.5e-132 477.2 606 44.7
CSS0040411 Camellia sinensis var. sinensis HOM05D003519 ORTHO05D004443 1.5e-132 477.2 606 44.7
Migut.L00384 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.5e-132 477.2 453 58.1
TAR625G0887 Trochodendron aralioides HOM05D003519 ORTHO05D004443 9.5e-132 474.6 613 43.7
Nitab4.5_0003068g0020 Nicotiana tabacum HOM05D003519 ORTHO05D004443 2.1e-131 473.4 613 43.2
Solyc04g076520.3 Solanum lycopersicum HOM05D003519 ORTHO05D004443 2.3e-130 469.9 614 42.3
Nitab4.5_0000227g0340 Nicotiana tabacum HOM05D003519 ORTHO05D004443 6.8e-130 468.4 613 43.1
TAR229G0003 Trochodendron aralioides HOM05D003519 ORTHO05D004443 1.5e-129 467.2 613 43.2
TAR381G0828 Trochodendron aralioides HOM05D003519 ORTHO05D004443 1.5e-129 467.2 613 43.2
Sopen04g030250 Solanum pennellii HOM05D003519 ORTHO05D004443 3.4e-129 466.1 614 42.0
Oeu050088.1 Olea europaea HOM05D003519 ORTHO05D004443 5.8e-129 465.3 542 48.5
Oeu050089.1 Olea europaea HOM05D003519 ORTHO05D004443 5.8e-129 465.3 542 48.5
PGSC0003DMG400009336 Solanum tuberosum HOM05D003519 ORTHO05D004443 1.3e-128 464.2 614 41.9
Rhsim08G0000500 Rhododendron simsii HOM05D003519 ORTHO05D004443 1.7e-128 463.8 607 43.7
Gohir.D04G033200 Gossypium hirsutum HOM05D003519 ORTHO05D004443 2.2e-128 463.4 614 43.6
TWI79G1726 Tripterygium wilfordii HOM05D003519 ORTHO05D004443 2.9e-128 463.0 610 43.1
Duzib187G0434 Durio zibethinus HOM05D003519 ORTHO05D004443 3.7e-128 462.6 615 44.1
Hma1.2p1_0310F.1_g121010 Hydrangea macrophylla HOM05D003519 ORTHO05D004443 1.9e-127 460.3 609 43.7
Gohir.A05G382700 Gossypium hirsutum HOM05D003519 ORTHO05D004443 4.1e-127 459.1 618 43.4
Peaxi162Scf00711g00512 Petunia axillaris HOM05D003519 ORTHO05D004443 4.1e-127 459.1 604 43.0
Gorai.012G036900 Gossypium raimondii HOM05D003519 ORTHO05D004443 7.1e-127 458.4 614 43.3
MD15G1134900 Malus domestica HOM05D003519 ORTHO05D004443 7.1e-127 458.4 609 43.2
Manes.12G158800 Manihot esculenta HOM05D003519 ORTHO05D004443 2.7e-126 456.4 610 42.6
PSO832G0337 Papaver somniferum HOM05D003519 ORTHO05D004443 4.6e-126 455.7 616 42.4
Lalb_Chr11g0068601 Lupinus albus HOM05D003519 ORTHO05D004443 6.0e-126 455.3 613 41.9
FvH4_1g24840 Fragaria vesca HOM05D003519 ORTHO05D004443 5.1e-125 452.2 611 43.2
Sabra05G0055300 Salix brachista HOM05D003519 ORTHO05D004443 6.6e-125 451.8 604 43.2
Prupe.4G275200 Prunus persica HOM05D003519 ORTHO05D004443 1.5e-124 450.7 610 42.0
CiPaw.03G118200 Carya illinoinensis HOM05D003519 ORTHO05D004443 2.5e-124 449.9 615 41.5
Migut.L00566 Erythranthe guttata HOM05D003519 ORTHO05D004443 3.3e-124 449.5 472 53.4
arahy.Tifrunner.gnm1.ann1.JB39ED Arachis hypogaea HOM05D003519 ORTHO05D004443 7.3e-124 448.4 603 43.4
Cc00_g06200 Coffea canephora HOM05D003519 ORTHO05D004443 7.3e-124 448.4 596 43.1
PGR102G0700 Punica granatum HOM05D003519 ORTHO05D004443 9.5e-124 448.0 613 42.4
Atru.chr4.987 Acer truncatum HOM05D003519 ORTHO05D004443 1.6e-123 447.2 609 42.0
arahy.Tifrunner.gnm1.ann1.CM19QL Arachis hypogaea HOM05D003519 ORTHO05D004443 1.6e-123 447.2 602 42.7
FAN26G0860 Fragaria x ananassa HOM05D003519 ORTHO05D004443 1.6e-123 447.2 612 42.6
FAN28G0413 Fragaria x ananassa HOM05D003519 ORTHO05D004443 2.1e-123 446.8 611 42.2
QL10p041283 Quercus lobata HOM05D003519 ORTHO05D004443 4.7e-123 445.7 611 42.4
Eucgr.H05140 Eucalyptus grandis HOM05D003519 ORTHO05D004443 6.2e-123 445.3 612 42.3
MELO3C008911.2 Cucumis melo HOM05D003519 ORTHO05D004443 1.1e-122 444.5 610 41.5
DCAR_019993 Daucus carota HOM05D003519 ORTHO05D004443 1.1e-122 444.5 599 41.2
Ciclev10000587m.g Citrus clementina HOM05D003519 ORTHO05D004443 1.8e-122 443.7 614 42.0
Potri.005G067300 Populus trichocarpa HOM05D003519 ORTHO05D004443 2.3e-122 443.4 606 42.2
CAN.G475.7 Capsicum annuum HOM05D003519 ORTHO05D004443 3.1e-122 443.0 618 40.8
RcHm_v2.0_Chr2g0122451 Rosa chinensis HOM05D003519 ORTHO05D004443 3.1e-122 443.0 612 42.3
Sed0005441 Sechium edule HOM05D003519 ORTHO05D004443 4.0e-122 442.6 610 42.5
ClCG04G002210 Citrullus lanatus HOM05D003519 ORTHO05D004443 5.2e-122 442.2 610 41.1
Migut.L00373 Erythranthe guttata HOM05D003519 ORTHO05D004443 6.8e-122 441.8 480 52.1
Glyma.06G155700 Glycine max HOM05D003519 ORTHO05D004443 6.8e-122 441.8 612 41.3
Lalb_Chr23g0272671 Lupinus albus HOM05D003519 ORTHO05D004443 8.9e-122 441.4 610 40.7
CsaV3_4G030500 Cucumis sativus L. HOM05D003519 ORTHO05D004443 1.2e-121 441.0 610 41.1
FAN23G1921 Fragaria x ananassa HOM05D003519 ORTHO05D004443 1.2e-121 441.0 611 41.9
Lsat_1_v5_gn_2_36940 Lactuca sativa HOM05D003519 ORTHO05D004443 3.4e-121 439.5 598 43.1
Haze_25334 Corylus avellana HOM05D003519 ORTHO05D004443 5.8e-121 438.7 606 41.7
Lj2A614T30 Lonicera japonica HOM05D003519 ORTHO05D004443 9.9e-121 438.0 578 43.6
Potri.007G102000 Populus trichocarpa HOM05D003519 ORTHO05D004443 1.3e-120 437.6 603 41.6
Migut.L00385 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.7e-120 437.2 470 52.6
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 2.2e-120 436.8 619 40.2
Sabra07G0084100 Salix brachista HOM05D003519 ORTHO05D004443 4.9e-120 435.6 606 42.2
CANSAT80G2376 Cannabis sativa HOM05D003519 ORTHO05D004443 1.4e-119 434.1 613 41.9
Psat5g059880 Pisum sativum HOM05D003519 ORTHO05D004443 3.2e-119 433.0 603 40.5
AUR62000513 Chenopodium quinoa HOM05D003519 ORTHO05D004443 5.4e-119 432.2 613 42.4
Ca_16980_v3 Cicer arietinum L. HOM05D003519 ORTHO05D004443 5.4e-119 432.2 596 40.9
GSVIVG01022332001 Vitis vinifera HOM05D003519 ORTHO05D004443 5.4e-119 432.2 545 44.2
Nn1g08957 Nelumbo nucifera HOM05D003519 ORTHO05D004443 1.2e-118 431.0 582 44.0
VMungo1309G2829 Vigna mungo HOM05D003519 ORTHO05D004443 2.1e-118 430.3 612 40.7
Phvul.009G154700 Phaseolus vulgaris HOM05D003519 ORTHO05D004443 6.0e-118 428.7 612 40.8
EL10Ac4g09622 Beta vulgaris HOM05D003519 ORTHO05D004443 7.8e-118 428.3 616 41.1
Hund21800 Selenicereus undatus HOM05D003519 ORTHO05D004443 1.0e-117 427.9 612 41.0
Cpa.g.sc37.5 Carica papaya HOM05D003519 ORTHO05D004443 3.9e-117 426.0 587 42.2
PSO063G6904 Papaver somniferum HOM05D003519 ORTHO05D004443 6.6e-117 425.2 531 45.0
arahy.Tifrunner.gnm1.ann1.I6W5T3 Arachis hypogaea HOM05D003519 ORTHO05D004443 8.6e-117 424.9 577 42.6
ECA238G3965 Erigeron canadensis HOM05D003519 ORTHO05D004443 8.6e-117 424.9 588 42.5
Medtr3g096670 Medicago truncatula HOM05D003519 ORTHO05D004443 1.9e-116 423.7 609 39.2
TPR.G33582 Trifolium pratense HOM05D003519 ORTHO05D004443 1.9e-116 423.7 605 40.0
Aqoxy5G02420 Aquilegia oxysepala HOM05D003519 ORTHO05D004443 3.3e-116 422.9 608 41.0
PSO832G1142 Papaver somniferum HOM05D003519 ORTHO05D004443 1.6e-115 420.6 618 40.1
THA.LOC104819485 Tarenaya hassleriana HOM05D003519 ORTHO05D004443 1.6e-115 420.6 611 41.2
Sc09g0002240 Simmondsia chinensis HOM05D003519 ORTHO05D004443 3.1e-114 416.4 614 39.9
Ah.04g157880 Amaranthus hybridus HOM05D003519 ORTHO05D004443 7.6e-113 411.8 621 39.3
arahy.Tifrunner.gnm1.ann1.02NDWK Arachis hypogaea HOM05D003519 ORTHO05D004443 2.2e-112 410.2 577 41.4
Glyma.08G002000 Glycine max HOM05D003519 ORTHO05D004443 8.7e-109 398.3 612 38.7
MBI03_g39654_MAGBIO Magnolia biondii HOM05D003519 ORTHO05D004443 3.3e-108 396.4 618 38.8
Migut.L00522 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.6e-107 394.0 537 45.4
CDE06G0958 Ceratophyllum demersum HOM05D003519 ORTHO05D004443 2.8e-107 393.3 587 40.4
Glyma.05G194000 Glycine max HOM05D003519 ORTHO05D004443 4.8e-107 392.5 611 37.5
Migut.L00382 Erythranthe guttata HOM05D003519 ORTHO05D004443 6.2e-107 392.1 537 45.4
VMungo0251G1228 Vigna mungo HOM05D003519 ORTHO05D004443 1.4e-106 391.0 617 37.8
Aa31LG9G16540 Aethionema arabicum HOM05D003519 ORTHO05D004443 2.1e-102 377.1 595 38.2
COL.COLO4_35812 Corchorus olitorius HOM05D003519 ORTHO05D004443 1.9e-100 370.5 473 44.4
FAN19G3005 Fragaria x ananassa HOM05D003519 ORTHO05D004443 1.9e-100 370.5 608 38.5
SEGI_06784 Sequoiadendron giganteum HOM05D003519 ORTHO05D004443 1.9e-100 370.5 650 35.7
AL7G50820 Arabidopsis lyrata HOM05D003519 ORTHO05D004443 7.3e-100 368.6 580 38.6
PSO063G4810 Papaver somniferum HOM05D003519 ORTHO05D004443 7.3e-100 368.6 558 40.3
HPP92_006886 Vanilla planifolia HOM05D003519 ORTHO05D004443 7.3e-100 368.6 570 40.0
Sp7g02520 Schrenkiella parvula HOM05D003519 ORTHO05D004443 3.8e-96 356.3 538 37.9
AL7G50860 Arabidopsis lyrata HOM05D003519 ORTHO05D004443 1.9e-95 354.0 578 36.7
Carub.0007s3648 Capsella rubella HOM05D003519 ORTHO05D004443 4.2e-95 352.8 581 37.2
AT5G39450 Arabidopsis thaliana HOM05D003519 ORTHO05D004443 3.5e-94 349.7 579 36.6
BraA04t16884Z Brassica rapa HOM05D003519 ORTHO05D004443 1.0e-93 348.2 537 38.4
AT5G39480 Arabidopsis thaliana HOM05D003519 ORTHO05D004443 2.3e-93 347.1 574 36.8
Sp7g02530 Schrenkiella parvula HOM05D003519 ORTHO05D004443 3.0e-93 346.7 488 40.6
BcaB06g27331 Brassica carinata HOM05D003519 ORTHO05D004443 3.9e-93 346.3 539 36.9
ATR0138G021 Amborella trichopoda HOM05D003519 ORTHO05D004443 5.1e-93 345.9 643 35.1
BcaB06g27312 Brassica carinata HOM05D003519 ORTHO05D004443 1.1e-92 344.7 539 37.7
C04p45890 Brassica napus HOM05D003519 ORTHO05D004443 1.1e-92 344.7 539 37.7
AT5G39490 Arabidopsis thaliana HOM05D003519 ORTHO05D004443 1.5e-92 344.4 577 36.6
CARHR262890 Cardamine hirsuta HOM05D003519 ORTHO05D004443 1.9e-92 344.0 556 37.4
CARHR258220 Cardamine hirsuta HOM05D003519 ORTHO05D004443 3.3e-92 343.2 585 37.1
Thhalv10027700m.g Eutrema salsugineum HOM05D003519 ORTHO05D004443 4.3e-92 342.8 585 36.9
BcaB06g27309 Brassica carinata HOM05D003519 ORTHO05D004443 1.6e-91 340.9 540 38.1
C04p45850 Brassica napus HOM05D003519 ORTHO05D004443 1.6e-91 340.9 539 38.2
BolC4t26171H Brassica oleracea HOM05D003519 ORTHO05D004443 8.1e-91 338.6 576 36.5
CARHR262900 Cardamine hirsuta HOM05D003519 ORTHO05D004443 1.1e-90 338.2 585 35.2
A04p12200 Brassica napus HOM05D003519 ORTHO05D004443 1.2e-89 334.7 546 37.5
A04p12190 Brassica napus HOM05D003519 ORTHO05D004443 2.0e-89 334.0 583 36.4
BolC4t26170H Brassica oleracea HOM05D003519 ORTHO05D004443 2.0e-89 334.0 586 36.2
A04p12230 Brassica napus HOM05D003519 ORTHO05D004443 5.8e-89 332.4 539 36.5
C04p45840 Brassica napus HOM05D003519 ORTHO05D004443 7.6e-89 332.0 586 36.0
BraA04t16883Z Brassica rapa HOM05D003519 ORTHO05D004443 1.3e-88 331.3 583 36.0
BcaB06g27308 Brassica carinata HOM05D003519 ORTHO05D004443 1.7e-88 330.9 586 36.0
A04p12220 Brassica napus HOM05D003519 ORTHO05D004443 6.5e-88 328.9 476 40.5
Psat7g045400 Pisum sativum HOM05D003519 ORTHO05D004443 1.4e-87 327.8 654 34.3
Phvul.002G274400 Phaseolus vulgaris HOM05D003519 ORTHO05D004443 1.9e-87 327.4 614 33.9
BcaB06g27330 Brassica carinata HOM05D003519 ORTHO05D004443 7.1e-87 325.5 587 34.9
Ca_17623_v3 Cicer arietinum L. HOM05D003519 ORTHO05D004443 6.0e-86 322.4 659 32.0
Sp7g02470 Schrenkiella parvula HOM05D003519 ORTHO05D004443 6.0e-86 322.4 580 35.5
Pp3c17_16670 Physcomitrium patens HOM05D003519 ORTHO05D004443 1.0e-85 321.6 538 37.4
Pp3c14_13020 Physcomitrium patens HOM05D003519 ORTHO05D004443 1.1e-84 318.2 537 37.1
TPR.G37338 Trifolium pratense HOM05D003519 ORTHO05D004443 1.9e-84 317.4 683 31.8
CARHR262850 Cardamine hirsuta HOM05D003519 ORTHO05D004443 7.4e-84 315.5 544 36.8
CARHR262880 Cardamine hirsuta HOM05D003519 ORTHO05D004443 1.6e-83 314.3 581 35.1
AT5G39460 Arabidopsis thaliana HOM05D003519 ORTHO05D004443 2.1e-83 313.9 586 36.3
BcaB06g27311 Brassica carinata HOM05D003519 ORTHO05D004443 8.2e-83 312.0 486 38.7
COL.COLO4_35769 Corchorus olitorius HOM05D003519 ORTHO05D004443 4.1e-82 309.7 447 42.1
C04p45870 Brassica napus HOM05D003519 ORTHO05D004443 6.9e-82 308.9 445 39.3
Os08g0105100 Oryza sativa ssp. japonica HOM05D003519 ORTHO05D004443 1.2e-81 308.1 561 37.3
Medtr8g094190 Medicago truncatula HOM05D003519 ORTHO05D004443 1.5e-81 307.8 641 32.9
Zm00001eb174460 Zea mays HOM05D003519 ORTHO05D004443 1.3e-80 304.7 568 35.7
Sp7g02490 Schrenkiella parvula HOM05D003519 ORTHO05D004443 1.1e-79 301.6 555 34.1
AL7G50850 Arabidopsis lyrata HOM05D003519 ORTHO05D004443 1.6e-78 297.7 541 36.4
CDE08G0134 Ceratophyllum demersum HOM05D003519 ORTHO05D004443 1.6e-78 297.7 588 34.2
PSO832G2795 Papaver somniferum HOM05D003519 ORTHO05D004443 3.9e-77 293.1 466 38.6
HPP92_025170 Vanilla planifolia HOM05D003519 ORTHO05D004443 2.5e-71 273.9 593 33.7
AL7G50830 Arabidopsis lyrata HOM05D003519 ORTHO05D004443 6.3e-59 232.6 483 34.0
BcaB06g27739 Brassica carinata HOM05D003519 ORTHO05D004443 2.7e-54 217.2 497 32.4
Migut.L00375 Erythranthe guttata HOM05D003519 ORTHO05D004443 6.1e-54 216.1 232 51.7
Medtr8g094150 Medicago truncatula HOM05D003519 ORTHO05D004443 8.8e-53 212.2 591 29.1
SMO137G0098 Selaginella moellendorffii HOM05D003519 ORTHO05D004443 8.2e-51 205.7 240 45.0
Medtr0095s0110 Medicago truncatula HOM05D003519 ORTHO05D004443 4.2e-47 193.4 180 51.7
MBI03_g31895_MAGBIO Magnolia biondii HOM05D003519 ORTHO05D004443 1.2e-38 165.2 170 48.2
Lj4g0010335 Lotus japonicus HOM05D003519 ORTHO05D004443 9.8e-36 155.6 431 28.1
BolC4t26573H Brassica oleracea HOM05D003519 ORTHO05D021767 2.3e-29 134.4 206 38.3
ATR0582G058 Amborella trichopoda HOM05D003519 ORTHO05D004443 1.3e-27 128.6 217 36.4
BcaB06g27313 Brassica carinata HOM05D003519 ORTHO05D024023 7.0e-26 122.9 273 32.6
BraA04t17193Z Brassica rapa HOM05D003519 ORTHO05D021767 5.0e-24 116.7 91 57.1
C04p45910 Brassica napus HOM05D003519 ORTHO05D024023 1.2e-22 112.1 182 39.0
BcaC02g08848 Brassica carinata HOM05D003519 ORTHO05D021767 1.6e-22 111.7 80 58.8
BcaC02g08849 Brassica carinata HOM05D003519 ORTHO05D021767 1.6e-22 111.7 80 58.8
BolC4t26173H Brassica oleracea HOM05D003519 ORTHO05D024023 3.6e-22 110.5 182 38.5
C04p49850 Brassica napus HOM05D003519 ORTHO05D021767 8.0e-22 109.4 78 59.0
A04p15580 Brassica napus HOM05D003519 ORTHO05D021767 1.0e-21 109.0 78 59.0
CARHR262910 Cardamine hirsuta HOM05D003519 ORTHO05D004443 4.4e-20 103.6 141 38.3
AagrBONN_evm.TU.Sc2ySwM_228.359 Anthoceros agrestis HOM05D003519 ORTHO05D004443 2.9e-19 100.9 188 37.8
BcaB06g27333 Brassica carinata HOM05D003519 ORTHO05D004443 6.4e-19 99.8 110 44.5
BcaB06g27335 Brassica carinata HOM05D003519 ORTHO05D004443 8.3e-19 99.4 85 52.9
Peaxi162Scf00711g00524 Petunia axillaris HOM05D003519 ORTHO05D004443 4.3e-15 87.0 167 35.3
Peaxi162Scf00711g00528 Petunia axillaris HOM05D003519 ORTHO05D024023 3.5e-09 67.4 73 43.8
BcaB06g27334 Brassica carinata HOM05D003519 ORTHO05D004443 8.6e-08 62.8 130 32.3


User provided reference genes

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