Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00479 Erythranthe guttata HOM05D004323 ORTHO05D005140 1.5e-157 559.7 328 100.0
Dinv19000 Davidia involucrata HOM05D004323 ORTHO05D005140 4.5e-85 318.9 288 61.8
unitig_748.g8745 Utricularia gibba HOM05D004323 ORTHO05D005140 1.6e-82 310.5 314 57.3
SGA_v2.0_scaffold174G39287 Striga asiatica HOM05D004323 ORTHO05D005140 2.1e-82 310.1 297 60.9
Dinv14868 Davidia involucrata HOM05D004323 ORTHO05D005140 1.3e-81 307.4 289 61.2
TAR622G1143 Trochodendron aralioides HOM05D004323 ORTHO05D005140 1.9e-80 303.5 300 57.7
CSS0029895 Camellia sinensis var. sinensis HOM05D004323 ORTHO05D005140 3.3e-80 302.8 294 59.5
DCAR_010732 Daucus carota HOM05D004323 ORTHO05D005140 7.4e-80 301.6 303 58.4
vmacro05495 Vaccinium macrocarpon HOM05D004323 ORTHO05D005140 1.1e-78 297.7 296 57.1
SalBow7G2861 Salvia bowleyana HOM05D004323 ORTHO05D005140 1.4e-78 297.4 283 60.8
Rhsim10G0078500 Rhododendron simsii HOM05D004323 ORTHO05D005140 3.1e-78 296.2 311 56.6
Cc07_g08280 Coffea canephora HOM05D004323 ORTHO05D005140 9.0e-78 294.7 298 58.7
TAR629G2255 Trochodendron aralioides HOM05D004323 ORTHO05D005140 7.6e-77 291.6 297 55.6
GSVIVG01030895001 Vitis vinifera HOM05D004323 ORTHO05D005140 3.8e-76 289.3 298 56.0
CAN.G625.75 Capsicum annuum HOM05D004323 ORTHO05D005140 9.3e-75 284.6 298 55.4
Nitab4.5_0003598g0060 Nicotiana tabacum HOM05D004323 ORTHO05D005140 1.6e-74 283.9 311 53.7
Hma1.2p1_0500F.1_g166900 Hydrangea macrophylla HOM05D004323 ORTHO05D005140 2.1e-74 283.5 326 52.8
Hma1.2p1_1820F.1_g304196 Hydrangea macrophylla HOM05D004323 ORTHO05D005140 2.1e-74 283.5 326 52.8
Nn4g24090 Nelumbo nucifera HOM05D004323 ORTHO05D005140 1.8e-73 280.4 330 58.8
ECA246G3962 Erigeron canadensis HOM05D004323 ORTHO05D005140 8.7e-73 278.1 298 54.7
Solyc02g091270.3 Solanum lycopersicum HOM05D004323 ORTHO05D005140 8.7e-73 278.1 294 54.8
HanXRQChr12g0375961 Helianthus annuus HOM05D004323 ORTHO05D005140 1.5e-72 277.3 303 54.8
Lj2C436T13 Lonicera japonica HOM05D004323 ORTHO05D005140 4.3e-72 275.8 328 52.7
PGSC0003DMG400030599 Solanum tuberosum HOM05D004323 ORTHO05D005140 7.4e-72 275.0 298 53.4
Dinv33986 Davidia involucrata HOM05D004323 ORTHO05D005140 4.8e-71 272.3 220 64.1
SalBow1G3118 Salvia bowleyana HOM05D004323 ORTHO05D005140 1.1e-70 271.2 204 69.6
Ah.02g115750 Amaranthus hybridus HOM05D004323 ORTHO05D005140 1.2e-69 267.7 307 54.4
Cfa008584 Carpinus fangiana HOM05D004323 ORTHO05D005140 1.2e-69 267.7 295 53.6
Cfa007861 Carpinus fangiana HOM05D004323 ORTHO05D007831 2.0e-69 266.9 294 53.4
Haze_11028 Corylus avellana HOM05D004323 ORTHO05D005140 2.6e-69 266.5 294 53.4
Duzib133G0462 Durio zibethinus HOM05D004323 ORTHO05D005140 2.6e-69 266.5 299 54.2
Haze_14209 Corylus avellana HOM05D004323 ORTHO05D007831 5.9e-69 265.4 312 54.8
Hund14974 Selenicereus undatus HOM05D004323 ORTHO05D005140 1.3e-68 264.2 311 53.4
CiPaw.05G248000 Carya illinoinensis HOM05D004323 ORTHO05D005140 2.2e-68 263.5 294 51.7
Nitab4.5_0002456g0110 Nicotiana tabacum HOM05D004323 ORTHO05D005140 2.9e-68 263.1 282 53.9
Potri.008G127900 Populus trichocarpa HOM05D004323 ORTHO05D005140 3.8e-68 262.7 290 53.8
Thecc.04G123700 Theobroma cacao HOM05D004323 ORTHO05D005140 3.8e-68 262.7 300 53.0
Sc14g0004810 Simmondsia chinensis HOM05D004323 ORTHO05D005140 5.0e-68 262.3 306 51.6
Ciclev10015960m.g Citrus clementina HOM05D004323 ORTHO05D005140 6.5e-68 261.9 291 54.0
Sopen02g035890 Solanum pennellii HOM05D004323 ORTHO05D005140 3.2e-67 259.6 294 52.0
Eucgr.C01716 Eucalyptus grandis HOM05D004323 ORTHO05D005140 4.2e-67 259.2 301 51.2
QL01p002128 Quercus lobata HOM05D004323 ORTHO05D005140 4.2e-67 259.2 301 50.5
Potri.010G114900 Populus trichocarpa HOM05D004323 ORTHO05D005140 7.2e-67 258.5 292 53.1
CiPaw.03G067400 Carya illinoinensis HOM05D004323 ORTHO05D005140 1.6e-66 257.3 339 55.8
HPP92_006392 Vanilla planifolia HOM05D004323 ORTHO05D005140 4.6e-66 255.8 294 52.7
COL.COLO4_27122 Corchorus olitorius HOM05D004323 ORTHO05D005140 1.0e-65 254.6 298 52.7
Atru.chr11.379 Acer truncatum HOM05D004323 ORTHO05D005140 3.0e-65 253.1 283 55.1
Manes.02G073900 Manihot esculenta HOM05D004323 ORTHO05D005140 3.9e-65 252.7 309 52.1
Gorai.007G185800 Gossypium raimondii HOM05D004323 ORTHO05D005140 1.5e-64 250.8 295 53.6
PSO063G1150 Papaver somniferum HOM05D004323 ORTHO05D005140 1.5e-64 250.8 310 51.6
EL10Ac5g11852 Beta vulgaris HOM05D004323 ORTHO05D005140 2.5e-64 250.0 304 50.7
CDE09G0723 Ceratophyllum demersum HOM05D004323 ORTHO05D005140 2.5e-64 250.0 305 52.8
FvH4_4g32210 Fragaria vesca HOM05D004323 ORTHO05D005140 2.5e-64 250.0 291 52.6
FAN12G1900 Fragaria x ananassa HOM05D004323 ORTHO05D005140 2.5e-64 250.0 291 52.6
FAN22G0457 Fragaria x ananassa HOM05D004323 ORTHO05D005140 2.5e-64 250.0 291 52.9
FAN07G1710 Fragaria x ananassa HOM05D004323 ORTHO05D005140 3.3e-64 249.6 293 53.2
Prupe.3G151600 Prunus persica HOM05D004323 ORTHO05D005140 3.3e-64 249.6 299 54.2
RcHm_v2.0_Chr4g0440951 Rosa chinensis HOM05D004323 ORTHO05D005140 3.3e-64 249.6 292 53.4
FAN17G1549 Fragaria x ananassa HOM05D004323 ORTHO05D005140 4.3e-64 249.2 291 52.6
Oeu030805.1 Olea europaea HOM05D004323 ORTHO05D005140 1.3e-63 247.7 301 51.8
Gohir.D11G173500 Gossypium hirsutum HOM05D004323 ORTHO05D005140 1.6e-63 247.3 296 52.4
Manes.15G126000 Manihot esculenta HOM05D004323 ORTHO05D005140 1.6e-63 247.3 291 54.3
Ca_17253_v3 Cicer arietinum L. HOM05D004323 ORTHO05D005140 3.7e-63 246.1 295 50.5
Prupe.1G322700 Prunus persica HOM05D004323 ORTHO05D005140 3.7e-63 246.1 288 49.7
Gohir.A11G167200 Gossypium hirsutum HOM05D004323 ORTHO05D005140 4.8e-63 245.7 299 52.2
arahy.Tifrunner.gnm1.ann1.B1S40C Arachis hypogaea HOM05D004323 ORTHO05D005140 8.2e-63 245.0 291 51.2
arahy.Tifrunner.gnm1.ann1.JPDL6B Arachis hypogaea HOM05D004323 ORTHO05D005140 8.2e-63 245.0 291 51.2
TWI53G1939 Tripterygium wilfordii HOM05D004323 ORTHO05D005140 1.1e-62 244.6 292 52.4
CANSAT01G2279 Cannabis sativa HOM05D004323 ORTHO05D005140 1.4e-62 244.2 334 54.5
Sed0006370 Sechium edule HOM05D004323 ORTHO05D005140 1.8e-62 243.8 303 50.8
Psat7g004960 Pisum sativum HOM05D004323 ORTHO05D005140 2.4e-62 243.4 292 50.3
Lj5g0025367 Lotus japonicus HOM05D004323 ORTHO05D005140 3.1e-62 243.0 290 50.3
Lj5g0009857 Lotus japonicus HOM05D004323 ORTHO05D005140 4.1e-62 242.7 290 50.3
PSO782G4339 Papaver somniferum HOM05D004323 ORTHO05D005140 4.1e-62 242.7 313 50.2
C06p45200 Brassica napus HOM05D004323 ORTHO05D005140 6.9e-62 241.9 300 52.3
BolC6t39576H Brassica oleracea HOM05D004323 ORTHO05D005140 6.9e-62 241.9 300 52.3
MD13G1027200 Malus domestica HOM05D004323 ORTHO05D005140 9.1e-62 241.5 291 49.1
Medtr8g105830 Medicago truncatula HOM05D004323 ORTHO05D005140 1.2e-61 241.1 292 49.3
ATR0326G041 Amborella trichopoda HOM05D004323 ORTHO05D005140 1.5e-61 240.7 285 51.9
BraA07t31307Z Brassica rapa HOM05D004323 ORTHO05D005140 1.5e-61 240.7 297 51.9
Os01g0507500 Oryza sativa ssp. japonica HOM05D004323 ORTHO05D005140 1.5e-61 240.7 282 52.5
Peaxi162Scf00803g00424 Petunia axillaris HOM05D004323 ORTHO05D005140 1.5e-61 240.7 272 53.3
Sabra10G0085000 Salix brachista HOM05D004323 ORTHO05D005140 2.0e-61 240.4 290 52.4
CsaV3_5G010330 Cucumis sativus L. HOM05D004323 ORTHO05D005140 7.7e-61 238.4 309 50.2
Zm00001eb217130 Zea mays HOM05D004323 ORTHO05D005140 7.7e-61 238.4 296 51.0
A07p37500 Brassica napus HOM05D004323 ORTHO05D005140 1.3e-60 237.7 294 52.0
Aqoxy3G03961 Aquilegia oxysepala HOM05D004323 ORTHO05D005140 1.7e-60 237.3 283 53.0
Psat7g006200 Pisum sativum HOM05D004323 ORTHO05D005140 1.7e-60 237.3 287 50.2
Atru.chr1.1769 Acer truncatum HOM05D004323 ORTHO05D005140 6.5e-60 235.3 299 49.2
Glyma.20G125700 Glycine max HOM05D004323 ORTHO05D005140 6.5e-60 235.3 295 50.2
Glyma.10G264800 Glycine max HOM05D004323 ORTHO05D005140 1.1e-59 234.6 294 50.3
CARHR064370 Cardamine hirsuta HOM05D004323 ORTHO05D005140 1.9e-59 233.8 294 51.0
MBI16_g32956_MAGBIO Magnolia biondii HOM05D004323 ORTHO05D005140 1.9e-59 233.8 263 54.4
Zm00001eb053510 Zea mays HOM05D004323 ORTHO05D005140 4.2e-59 232.6 289 49.8
BcaC08g46546 Brassica carinata HOM05D004323 ORTHO05D005140 5.5e-59 232.3 296 51.4
MD09G1260000 Malus domestica HOM05D004323 ORTHO05D005140 5.5e-59 232.3 297 52.2
Oeu041976.1 Olea europaea HOM05D004323 ORTHO05D005140 7.2e-59 231.9 163 75.5
Phvul.007G037100 Phaseolus vulgaris HOM05D004323 ORTHO05D005140 9.4e-59 231.5 294 50.3
BcaB03g14869 Brassica carinata HOM05D004323 ORTHO05D005140 2.1e-58 230.3 306 49.0
Lalb_Chr02g0145481 Lupinus albus HOM05D004323 ORTHO05D005140 2.1e-58 230.3 293 48.1
Sabra08G0096600 Salix brachista HOM05D004323 ORTHO05D005140 2.1e-58 230.3 275 50.5
Sp5g26250 Schrenkiella parvula HOM05D004323 ORTHO05D005140 2.7e-58 229.9 295 51.2
Ciclev10012163m.g Citrus clementina HOM05D004323 ORTHO05D005140 3.6e-58 229.6 295 49.5
Thhalv10018840m.g Eutrema salsugineum HOM05D004323 ORTHO05D005140 4.6e-58 229.2 293 52.9
MD16G1030300 Malus domestica HOM05D004323 ORTHO05D005140 7.9e-58 228.4 290 46.6
Actinidia17651 Actinidia chinensis HOM05D004323 ORTHO05D005140 1.0e-57 228.0 292 51.4
AL2G30660 Arabidopsis lyrata HOM05D004323 ORTHO05D005140 3.0e-57 226.5 294 51.0
AT1G71080 Arabidopsis thaliana HOM05D004323 ORTHO05D005140 3.9e-57 226.1 290 51.0
unitig_32.g11885 Utricularia gibba HOM05D004323 ORTHO05D005140 3.9e-57 226.1 294 49.0
Potri.004G092200 Populus trichocarpa HOM05D004323 ORTHO05D005140 6.7e-57 225.3 286 47.9
VMungo0720G0280 Vigna mungo HOM05D004323 ORTHO05D005140 1.1e-56 224.6 291 47.4
Carub.0002s1789 Capsella rubella HOM05D004323 ORTHO05D005140 2.6e-56 223.4 292 50.3
Lalb_Chr06g0165621 Lupinus albus HOM05D004323 ORTHO05D005140 4.4e-56 222.6 297 48.5
PGR004G1785 Punica granatum HOM05D004323 ORTHO05D005140 4.4e-56 222.6 298 48.7
Cpa.g.sc116.11 Carica papaya HOM05D004323 ORTHO05D005140 7.4e-56 221.9 289 50.2
Eucgr.F02814 Eucalyptus grandis HOM05D004323 ORTHO05D005140 7.4e-56 221.9 285 47.7
Cpa.g.sc65.119 Carica papaya HOM05D004323 ORTHO05D005140 9.7e-56 221.5 301 48.2
ClCG07G004410 Citrullus lanatus HOM05D004323 ORTHO05D005140 5.9e-53 212.2 304 46.7
Aa31LG4G9980 Aethionema arabicum HOM05D004323 ORTHO05D005140 7.7e-53 211.8 297 48.8
TWI79G0055 Tripterygium wilfordii HOM05D004323 ORTHO05D005140 1.0e-52 211.5 284 48.6
PGR119G1370 Punica granatum HOM05D004323 ORTHO05D005140 2.1e-50 203.8 291 44.0
Sabra04G0062000 Salix brachista HOM05D004323 ORTHO05D005140 4.7e-50 202.6 333 40.2
THA.LOC104810161 Tarenaya hassleriana HOM05D004323 ORTHO05D005140 7.9e-50 201.8 215 54.0
CDE08G1420 Ceratophyllum demersum HOM05D004323 ORTHO05D005140 3.9e-49 199.5 301 47.5
Gohir.A07G076100 Gossypium hirsutum HOM05D004323 ORTHO05D005140 4.4e-48 196.1 228 50.9
Nn3g18066 Nelumbo nucifera HOM05D004323 ORTHO05D005140 1.3e-47 194.5 151 65.6
THA.LOC104805595 Tarenaya hassleriana HOM05D004323 ORTHO05D005140 4.8e-47 192.6 300 43.3
AUR62030721 Chenopodium quinoa HOM05D004323 ORTHO05D005140 5.3e-46 189.1 170 61.2
Gorai.001G085700 Gossypium raimondii HOM05D004323 ORTHO05D005140 2.6e-45 186.8 225 50.7
Gohir.D07G080600 Gossypium hirsutum HOM05D004323 ORTHO05D005140 3.5e-45 186.4 225 50.7
PSO063G0228 Papaver somniferum HOM05D004323 ORTHO05D005140 1.5e-43 181.0 119 73.9
CARHR214700 Cardamine hirsuta HOM05D004323 ORTHO05D005140 3.6e-42 176.4 290 40.7
SHI04771 Sapria himalayana HOM05D004323 ORTHO05D005140 1.8e-41 174.1 301 42.2
TWI75G0714 Tripterygium wilfordii HOM05D004323 ORTHO05D005140 1.2e-40 171.4 244 49.2
SEGI_02231 Sequoiadendron giganteum HOM05D004323 ORTHO05D005140 9.7e-40 168.3 183 51.4
CSS0030424 Camellia sinensis var. sinensis HOM05D004323 ORTHO05D005140 1.7e-39 167.5 164 57.3
AT5G38050 Arabidopsis thaliana HOM05D004323 ORTHO05D005140 6.3e-39 165.6 295 39.3
Sp7g04050 Schrenkiella parvula HOM05D004323 ORTHO05D005140 3.1e-38 163.3 290 38.6
Carub.0005s1233 Capsella rubella HOM05D004323 ORTHO05D005140 1.2e-37 161.4 290 41.4
CSS0049640 Camellia sinensis var. sinensis HOM05D004323 ORTHO05D005140 7.7e-37 158.7 162 56.8
SMO268G0019 Selaginella moellendorffii HOM05D004323 ORTHO05D005140 3.6e-34 149.8 163 53.4
Thhalv10027858m.g Eutrema salsugineum HOM05D004323 ORTHO05D005140 1.0e-33 148.3 284 39.4
AagrBONN_evm.TU.Sc2ySwM_344.4471 Anthoceros agrestis HOM05D004323 ORTHO05D005140 3.0e-33 146.7 131 55.7
AagrBONN_evm.TU.Sc2ySwM_117.2431 Anthoceros agrestis HOM05D004323 ORTHO05D005140 5.2e-33 146.0 120 58.3
Pp3c18_1330 Physcomitrium patens HOM05D004323 ORTHO05D005140 2.2e-31 140.6 145 52.4
Pp3c21_20610 Physcomitrium patens HOM05D004323 ORTHO05D005140 1.4e-30 137.9 186 44.6
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 7.0e-30 135.6 292 35.6
AUR62036351 Chenopodium quinoa HOM05D004323 ORTHO05D005140 7.0e-30 135.6 242 40.9
Mapoly0014s0191 Marchantia polymorpha HOM05D004323 ORTHO05D005140 7.0e-30 135.6 303 35.3
BcaB06g27162 Brassica carinata HOM05D004323 ORTHO05D005140 1.4e-25 121.3 129 51.9
CBR_g81558 Chara braunii HOM05D004323 ORTHO05D005140 2.3e-25 120.6 170 42.9
FvH4_7g01202 Fragaria vesca HOM05D004323 ORTHO05D005140 5.4e-22 109.4 74 70.3
Lsat_1_v5_gn_3_83040 Lactuca sativa HOM05D004323 ORTHO05D005140 1.5e-19 101.3 154 50.6
BcaB05g24642 Brassica carinata HOM05D004323 ORTHO05D005140 1.6e-18 97.8 170 38.8
CSS0012754 Camellia sinensis var. sinensis HOM05D004323 ORTHO05D005140 4.6e-13 79.7 141 44.0
Nn091s42875 Nelumbo nucifera HOM05D004323 ORTHO05D005140 3.0e-12 77.0 118 44.1
MELO3C018369.2 Cucumis melo HOM05D004323 ORTHO05D005140 1.6e-10 71.2 135 45.9
Duzib138G1259 Durio zibethinus HOM05D004323 ORTHO05D005140 8.0e-10 68.9 158 39.9
AL7G52902 Arabidopsis lyrata HOM05D004323 ORTHO05D005140 1.8e-09 67.8 55 56.4
Sed0022868 Sechium edule HOM05D004323 ORTHO05D005140 3.1e-09 67.0 57 63.2
FAN16G1718 Fragaria x ananassa HOM05D004323 ORTHO05D005140 6.4e-07 59.3 45 57.8
QL02p048579 Quercus lobata HOM05D004323 ORTHO05D005140 2.4e-06 57.4 121 36.4


User provided reference genes

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