Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 6.7e-121 437.6 255 100.0
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 4.5e-93 345.1 263 69.2
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 5.0e-92 341.7 264 68.9
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 2.5e-91 339.3 265 66.8
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.2e-82 310.5 274 63.9
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 2.0e-80 303.1 267 63.7
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 9.8e-80 300.8 254 65.7
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 1.3e-79 300.4 247 65.6
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 2.8e-79 299.3 247 65.2
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 3.7e-79 298.9 247 64.8
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 6.3e-79 298.1 271 62.7
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 1.1e-78 297.4 271 61.6
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 1.8e-78 296.6 263 62.7
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 2.4e-78 296.2 263 62.0
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 3.1e-78 295.8 273 61.9
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 5.4e-78 295.0 259 63.3
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 9.1e-78 294.3 255 64.3
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 5.9e-77 291.6 273 61.2
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 5.9e-77 291.6 273 61.2
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.3e-76 290.4 254 61.4
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 1.7e-76 290.0 262 60.7
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 2.3e-76 289.7 258 64.0
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 5.0e-76 288.5 264 63.6
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 6.6e-76 288.1 258 62.4
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 6.6e-76 288.1 266 60.9
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 6.6e-76 288.1 272 61.4
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 8.6e-76 287.7 252 63.5
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 1.1e-75 287.3 260 62.7
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.1e-75 287.3 239 64.9
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.9e-75 286.6 213 71.4
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 1.9e-75 286.6 232 67.2
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 2.5e-75 286.2 269 60.2
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 2.5e-75 286.2 232 67.2
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 2.5e-75 286.2 257 64.6
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 3.3e-75 285.8 238 64.7
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 3.3e-75 285.8 255 62.0
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 4.2e-75 285.4 232 64.2
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 5.5e-75 285.0 213 71.8
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 7.2e-75 284.6 230 67.4
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 9.5e-75 284.3 257 61.5
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 9.5e-75 284.3 239 65.7
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 1.6e-74 283.5 263 62.0
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 2.1e-74 283.1 236 66.5
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 6.1e-74 281.6 268 60.1
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 1.0e-73 280.8 270 61.1
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 1.0e-73 280.8 259 62.9
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 1.4e-73 280.4 229 66.4
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.3e-73 279.6 268 60.4
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 3.0e-73 279.3 265 62.6
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 4.0e-73 278.9 268 59.7
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 5.2e-73 278.5 244 61.9
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 5.2e-73 278.5 260 62.3
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 5.2e-73 278.5 260 61.9
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 8.9e-73 277.7 268 59.3
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 3.4e-72 275.8 267 57.7
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 4.4e-72 275.4 206 69.4
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 4.4e-72 275.4 264 61.0
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 1.7e-71 273.5 234 63.2
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 2.8e-71 272.7 266 61.3
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.8e-71 272.7 209 70.8
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 3.7e-71 272.3 267 59.2
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 6.3e-71 271.6 196 72.4
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 6.3e-71 271.6 223 65.0
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 8.3e-71 271.2 233 65.2
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 8.3e-71 271.2 209 70.3
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.4e-70 270.4 209 70.3
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 3.2e-70 269.2 196 73.0
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 3.2e-70 269.2 263 59.7
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 4.1e-70 268.9 266 61.3
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 5.4e-70 268.5 222 67.1
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 5.4e-70 268.5 187 74.3
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 5.4e-70 268.5 192 76.0
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 5.4e-70 268.5 260 60.0
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 1.2e-69 267.3 222 67.6
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 1.2e-69 267.3 222 67.6
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 1.6e-69 266.9 265 60.4
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 1.6e-69 266.9 188 76.6
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 2.7e-69 266.2 269 59.9
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 2.7e-69 266.2 199 74.4
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 3.5e-69 265.8 267 58.8
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 3.5e-69 265.8 190 74.7
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 4.5e-69 265.4 192 74.0
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 4.5e-69 265.4 186 73.1
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 5.9e-69 265.0 267 58.1
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 5.9e-69 265.0 269 59.5
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 7.8e-69 264.6 264 59.1
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.3e-68 263.8 202 71.8
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 2.3e-68 263.1 190 74.7
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 2.9e-68 262.7 186 74.2
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 2.9e-68 262.7 275 58.2
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 3.9e-68 262.3 227 65.6
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 5.0e-68 261.9 264 58.3
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 1.1e-67 260.8 267 57.7
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 3.6e-66 255.8 265 58.1
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 4.7e-66 255.4 253 56.9
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.4e-65 253.8 222 62.6
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 2.3e-65 253.1 190 69.5
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 5.2e-65 251.9 201 68.2
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 1.2e-64 250.8 187 71.7
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 8.6e-60 234.6 231 57.1
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 2.8e-58 229.6 195 59.5
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 1.1e-57 227.6 270 51.1
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.5e-56 223.8 259 54.4
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 3.2e-54 216.1 196 57.7
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 3.0e-52 209.5 198 56.1
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 7.3e-51 204.9 189 60.8
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 9.5e-51 204.5 205 53.2
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 7.6e-48 194.9 214 55.1
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 8.6e-44 181.4 132 73.5
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 2.5e-43 179.9 119 80.7
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 6.4e-39 165.2 134 68.7
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 7.8e-37 158.3 199 44.7
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 1.7e-36 157.1 196 45.4
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 2.1e-34 150.2 106 71.7
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 1.1e-30 137.9 110 64.5
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 9.3e-30 134.8 96 77.1
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 2.1e-26 123.6 137 51.1
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 5.3e-25 119.0 248 32.3
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 9.0e-25 118.2 110 52.7
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 6.9e-17 92.0 71 66.2
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 4.2e-14 82.8 93 54.8
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 1.4e-09 67.8 44 75.0
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 2.0e-08 63.9 65 56.9


User provided reference genes

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