Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 7.5e-40 166.8 87 100.0
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 2.5e-35 151.8 83 91.6
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 1.6e-34 149.1 84 89.3
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 1.6e-34 149.1 84 89.3
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 2.8e-34 148.3 84 88.1
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 2.8e-34 148.3 84 88.1
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 3.6e-34 147.9 84 88.1
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 3.6e-34 147.9 84 88.1
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 3.6e-34 147.9 84 88.1
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 3.6e-34 147.9 84 88.1
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 3.6e-34 147.9 84 88.1
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 3.6e-34 147.9 84 88.1
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 4.7e-34 147.5 84 88.1
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 8.0e-34 146.7 83 88.0
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 8.0e-34 146.7 84 86.9
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 1.1e-33 146.4 83 89.2
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 1.1e-33 146.4 84 86.9
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 1.1e-33 146.4 84 86.9
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 1.1e-33 146.4 84 86.9
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 1.1e-33 146.4 84 86.9
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 1.1e-33 146.4 83 89.2
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 1.1e-33 146.4 84 86.9
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 1.4e-33 146.0 84 86.9
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 1.4e-33 146.0 84 86.9
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 1.4e-33 146.0 84 86.9
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 1.4e-33 146.0 83 88.0
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 1.4e-33 146.0 83 88.0
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 1.4e-33 146.0 84 86.9
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 1.4e-33 146.0 84 86.9
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 1.4e-33 146.0 84 86.9
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 1.8e-33 145.6 83 88.0
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 1.8e-33 145.6 83 86.7
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 3.1e-33 144.8 84 85.7
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 3.1e-33 144.8 83 88.0
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 3.1e-33 144.8 84 85.7
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 4.0e-33 144.4 83 85.5
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 4.0e-33 144.4 84 85.7
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 4.0e-33 144.4 84 85.7
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 5.2e-33 144.1 83 86.7
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 5.2e-33 144.1 83 85.5
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 6.8e-33 143.7 84 84.5
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 6.8e-33 143.7 84 84.5
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 6.8e-33 143.7 84 84.5
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 6.8e-33 143.7 84 84.5
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 6.8e-33 143.7 84 84.5
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 8.9e-33 143.3 83 85.5
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 1.2e-32 142.9 84 85.7
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 1.2e-32 142.9 83 84.3
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 1.2e-32 142.9 83 85.5
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 1.2e-32 142.9 83 86.7
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 1.2e-32 142.9 83 86.7
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 1.2e-32 142.9 84 85.7
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 1.2e-32 142.9 84 85.7
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.5e-32 142.5 83 85.5
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 1.5e-32 142.5 83 86.7
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 2.6e-32 141.7 80 88.8
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 2.6e-32 141.7 80 88.8
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 2.6e-32 141.7 80 88.8
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 2.6e-32 141.7 80 88.8
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 2.6e-32 141.7 80 88.8
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 2.6e-32 141.7 84 83.3
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 3.4e-32 141.4 83 85.5
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 3.4e-32 141.4 83 85.5
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 3.4e-32 141.4 84 83.3
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 3.4e-32 141.4 83 84.3
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 4.4e-32 141.0 83 84.3
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 4.4e-32 141.0 84 83.3
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 5.8e-32 140.6 84 82.1
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 9.8e-32 139.8 82 85.4
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 1.3e-31 139.4 85 83.5
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 1.3e-31 139.4 79 86.1
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 1.3e-31 139.4 83 83.1
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 1.7e-31 139.0 84 81.0
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 2.9e-31 138.3 84 82.1
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 1.2e-29 132.9 85 80.0
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 1.2e-29 132.9 85 80.0
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 2.1e-29 132.1 90 75.6
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 4.6e-29 131.0 84 75.0
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 7.8e-29 130.2 83 78.3
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 3.9e-28 127.9 72 87.5
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 8.6e-28 126.7 72 87.5
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 8.6e-28 126.7 83 74.7
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 1.9e-27 125.6 73 86.3
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 4.3e-27 124.4 78 79.5
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 7.3e-27 123.6 87 73.6
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 1.2e-26 122.9 71 83.1
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 2.1e-26 122.1 80 78.8
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 2.1e-26 122.1 80 78.8
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 3.6e-26 121.3 83 78.3
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 4.7e-26 120.9 73 80.8
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 8.1e-26 120.2 73 83.6
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 8.1e-26 120.2 83 74.7
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 8.1e-26 120.2 83 74.7
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 8.1e-26 120.2 83 74.7
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 1.4e-25 119.4 83 74.7
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 8.9e-25 116.7 83 72.3
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 2.0e-24 115.5 91 68.1
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 9.9e-24 113.2 85 69.4
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 1.1e-22 109.8 83 66.3
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 1.2e-18 96.3 71 67.6
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 3.6e-18 94.7 76 60.5
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 8.1e-18 93.6 72 63.9
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 2.4e-17 92.0 74 63.5
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 2.0e-16 89.0 83 60.2
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 7.6e-16 87.0 64 71.9
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 6.4e-15 84.0 44 88.6
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.4e-14 82.0 49 83.7
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 3.9e-12 74.7 44 77.3
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 6.6e-12 73.9 70 55.7
SEGI_40703 Sequoiadendron giganteum HOM05D007087 ORTHO05D008968 5.8e-08 60.8 64 40.6
Nitab4.5_0000465g0080 Nicotiana tabacum HOM05D007087 ORTHO05D008968 9.3e-06 53.5 33 72.7


User provided reference genes

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