Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 8.7e-90 333.6 164 100.0
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 8.7e-90 333.6 164 100.0
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 6.8e-50 201.1 163 64.4
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 8.9e-42 174.1 165 59.4
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 7.5e-41 171.0 163 60.1
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 7.0e-39 164.5 165 55.2
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 9.2e-39 164.1 162 54.9
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 7.8e-38 161.0 128 64.8
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 1.2e-35 153.7 164 53.7
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 4.7e-35 151.8 130 61.5
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 6.2e-35 151.4 155 50.3
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 6.2e-35 151.4 113 66.4
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 8.0e-35 151.0 163 49.1
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 8.0e-35 151.0 163 49.1
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 1.1e-34 150.6 139 58.3
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 1.4e-34 150.2 113 67.3
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 1.8e-34 149.8 109 69.7
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 1.8e-34 149.8 130 61.5
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 2.3e-34 149.4 142 57.0
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 5.2e-34 148.3 122 62.3
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 1.2e-33 147.1 141 57.4
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 1.5e-33 146.7 110 67.3
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 4.4e-33 145.2 169 47.9
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 5.8e-33 144.8 106 67.9
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 5.8e-33 144.8 166 48.2
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 7.5e-33 144.4 103 69.9
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 7.5e-33 144.4 104 71.2
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 9.8e-33 144.1 105 70.5
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 1.3e-32 143.7 105 70.5
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 1.3e-32 143.7 104 70.2
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 1.3e-32 143.7 104 70.2
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 1.3e-32 143.7 114 63.2
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 1.3e-32 143.7 109 67.0
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 1.7e-32 143.3 104 70.2
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 1.7e-32 143.3 104 70.2
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 1.7e-32 143.3 104 70.2
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.2e-32 142.9 107 65.4
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 2.2e-32 142.9 104 65.4
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 2.9e-32 142.5 106 69.8
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 2.9e-32 142.5 107 70.1
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 8.3e-32 141.0 163 49.1
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 1.1e-31 140.6 107 64.5
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 1.1e-31 140.6 128 55.5
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 1.1e-31 140.6 164 48.8
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 4.1e-31 138.7 107 63.6
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 5.4e-31 138.3 160 48.8
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 7.0e-31 137.9 102 65.7
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 1.6e-30 136.7 136 52.9
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 3.5e-30 135.6 115 59.1
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 4.6e-30 135.2 169 49.1
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 4.6e-30 135.2 112 61.6
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 7.8e-30 134.4 119 61.3
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 1.3e-29 133.7 105 64.8
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 3.0e-29 132.5 138 53.6
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 3.9e-29 132.1 165 44.8
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 5.0e-29 131.7 138 50.7
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 6.6e-29 131.3 103 60.2
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 8.6e-29 131.0 170 47.6
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 1.5e-28 130.2 132 54.5
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 1.9e-28 129.8 113 61.1
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 2.5e-28 129.4 138 50.0
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 9.5e-28 127.5 91 64.8
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 1.2e-27 127.1 94 66.0
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 1.2e-27 127.1 105 62.9
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 2.1e-27 126.3 103 56.3
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 4.7e-27 125.2 93 65.6
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 4.7e-27 125.2 75 80.0
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 6.2e-27 124.8 82 70.7
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 6.2e-27 124.8 75 78.7
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 8.1e-27 124.4 177 41.2
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 1.1e-26 124.0 91 69.2
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 1.1e-26 124.0 79 72.2
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 1.1e-26 124.0 75 80.0
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 5.2e-26 121.7 68 79.4
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 5.2e-26 121.7 102 64.7
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 1.2e-25 120.6 153 46.4
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 3.4e-25 119.0 94 62.8
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 3.4e-25 119.0 68 75.0
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 3.4e-25 119.0 84 65.5
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 9.9e-25 117.5 82 65.9
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 9.9e-25 117.5 82 65.9
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 2.2e-24 116.3 78 67.9
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 2.9e-24 115.9 78 67.9
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 3.7e-24 115.5 160 43.8
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 4.9e-24 115.2 105 58.1
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.4e-23 113.6 94 60.6
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 1.9e-23 113.2 114 54.4
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 4.1e-23 112.1 102 57.8
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 5.4e-23 111.7 67 73.1
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 5.4e-23 111.7 145 47.6
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 5.4e-23 111.7 123 48.0
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 9.2e-23 110.9 78 69.2
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 6.0e-22 108.2 98 53.1
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 3.0e-21 105.9 151 41.1
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 1.5e-20 103.6 86 61.6
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 2.5e-20 102.8 75 68.0
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 1.2e-19 100.5 94 53.2
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 6.8e-18 94.7 65 67.7
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 3.5e-14 82.4 104 43.3
PRCOL_00005620 Prasinoderma coloniale HOM05D007514 ORTHO05D009469 2.1e-06 56.6 55 49.1
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 4.6e-06 55.5 87 33.3


User provided reference genes

Program Settings