Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00391 Erythranthe guttata HOM05D004385 ORTHO05D005245 7.7e-132 473.8 234 100.0
Migut.L00572 Erythranthe guttata HOM05D004385 ORTHO05D005245 1.5e-122 443.0 232 93.1
SGA_v2.0_scaffold21G09621 Striga asiatica HOM05D004385 ORTHO05D005245 4.9e-94 348.2 224 73.2
MD16G1239400 Malus domestica HOM05D004385 ORTHO05D005245 6.4e-86 321.2 217 65.0
Peaxi162Scf00320g00411 Petunia axillaris HOM05D004385 ORTHO05D005245 1.4e-85 320.1 225 64.4
Manes.03G078400 Manihot esculenta HOM05D004385 ORTHO05D005245 1.9e-85 319.7 226 63.7
HanXRQChr03g0067331 Helianthus annuus HOM05D004385 ORTHO05D005245 4.2e-85 318.5 214 66.8
Nitab4.5_0000413g0040 Nicotiana tabacum HOM05D004385 ORTHO05D005245 4.2e-85 318.5 224 63.4
Peaxi162Scf00320g00317 Petunia axillaris HOM05D004385 ORTHO05D005245 7.1e-85 317.8 220 65.5
Prupe.1G065500 Prunus persica HOM05D004385 ORTHO05D005245 2.1e-84 316.2 217 64.5
Sopen07g005830 Solanum pennellii HOM05D004385 ORTHO05D005245 2.7e-84 315.8 220 65.5
vmacro22292 Vaccinium macrocarpon HOM05D004385 ORTHO05D005245 2.7e-84 315.8 232 61.2
FvH4_4g06230 Fragaria vesca HOM05D004385 ORTHO05D005245 3.5e-84 315.5 229 61.1
RcHm_v2.0_Chr4g0397951 Rosa chinensis HOM05D004385 ORTHO05D005245 3.5e-84 315.5 229 60.7
Manes.03G078300 Manihot esculenta HOM05D004385 ORTHO05D005245 6.0e-84 314.7 218 65.1
Dinv26468 Davidia involucrata HOM05D004385 ORTHO05D005245 1.0e-83 313.9 220 62.3
Rhsim05G0069600 Rhododendron simsii HOM05D004385 ORTHO05D005245 1.0e-83 313.9 220 64.1
Sed0013454 Sechium edule HOM05D004385 ORTHO05D005245 5.1e-83 311.6 221 62.4
TWI32G0217 Tripterygium wilfordii HOM05D004385 ORTHO05D005245 5.1e-83 311.6 218 63.3
Potri.018G138206 Populus trichocarpa HOM05D004385 ORTHO05D005245 8.7e-83 310.8 222 62.2
CiPaw.15G156000 Carya illinoinensis HOM05D004385 ORTHO05D005245 2.5e-82 309.3 222 61.3
Psat0s8631g0040 Pisum sativum HOM05D004385 ORTHO05D005245 3.3e-82 308.9 230 61.3
TAR626G1834 Trochodendron aralioides HOM05D004385 ORTHO05D005245 3.3e-82 308.9 216 64.4
Peaxi162Scf00320g00316 Petunia axillaris HOM05D004385 ORTHO05D005245 5.6e-82 308.1 224 62.5
Lsat_1_v5_gn_7_57600 Lactuca sativa HOM05D004385 ORTHO05D005245 9.6e-82 307.4 220 62.7
Cpa.g.sc123.33 Carica papaya HOM05D004385 ORTHO05D005245 1.6e-81 306.6 218 62.4
COL.COLO4_24913 Corchorus olitorius HOM05D004385 ORTHO05D005245 2.1e-81 306.2 223 61.9
ECA240G2514 Erigeron canadensis HOM05D004385 ORTHO05D005245 2.8e-81 305.8 220 63.2
Migut.L01912 Erythranthe guttata HOM05D004385 ORTHO05D005245 2.8e-81 305.8 226 62.8
Atru.chr7.972_Atru.chr7.973 Acer truncatum HOM05D004385 ORTHO05D005245 4.8e-81 305.1 218 61.9
CANSAT80G0643 Cannabis sativa HOM05D004385 ORTHO05D005245 4.8e-81 305.1 220 61.4
Lj3g0012868 Lotus japonicus HOM05D004385 ORTHO05D005245 4.8e-81 305.1 223 61.4
Thecc.09G194100 Theobroma cacao HOM05D004385 ORTHO05D005245 4.8e-81 305.1 223 61.0
Glyma.12G049000 Glycine max HOM05D004385 ORTHO05D005245 6.2e-81 304.7 223 60.5
CSS0002376 Camellia sinensis var. sinensis HOM05D004385 ORTHO05D005245 8.1e-81 304.3 239 59.8
Lalb_Chr19g0138471 Lupinus albus HOM05D004385 ORTHO05D005245 8.1e-81 304.3 218 62.8
Nitab4.5_0001205g0010 Nicotiana tabacum HOM05D004385 ORTHO05D005245 8.1e-81 304.3 217 63.6
Medtr4g068230 Medicago truncatula HOM05D004385 ORTHO05D005245 1.1e-80 303.9 230 59.1
arahy.Tifrunner.gnm1.ann1.77JVZB Arachis hypogaea HOM05D004385 ORTHO05D005245 1.4e-80 303.5 220 61.4
Haze_19053 Corylus avellana HOM05D004385 ORTHO05D005245 1.4e-80 303.5 217 61.3
Sed0018057 Sechium edule HOM05D004385 ORTHO05D005245 2.4e-80 302.8 216 61.6
QL11p009243 Quercus lobata HOM05D004385 ORTHO05D005245 3.1e-80 302.4 217 61.3
CANSAT80G1931 Cannabis sativa HOM05D004385 ORTHO05D005245 4.0e-80 302.0 228 60.1
Ca_20811_v3 Cicer arietinum L. HOM05D004385 ORTHO05D005245 5.3e-80 301.6 237 58.6
Gohir.D05G001400 Gossypium hirsutum HOM05D004385 ORTHO05D005245 5.3e-80 301.6 228 58.8
Gorai.009G001300 Gossypium raimondii HOM05D004385 ORTHO05D005245 5.3e-80 301.6 228 58.8
Sed0010902 Sechium edule HOM05D004385 ORTHO05D005245 5.3e-80 301.6 231 57.1
MBI11_g07424_MAGBIO Magnolia biondii HOM05D004385 ORTHO05D005245 6.9e-80 301.2 216 63.0
Phvul.011G051400 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 6.9e-80 301.2 226 60.6
Sed0010048 Sechium edule HOM05D004385 ORTHO05D005245 6.9e-80 301.2 217 60.8
TPR.G34256 Trifolium pratense HOM05D004385 ORTHO05D005245 9.0e-80 300.8 228 58.8
FAN12G0289 Fragaria x ananassa HOM05D004385 ORTHO05D005245 1.2e-79 300.4 257 54.5
arahy.Tifrunner.gnm1.ann1.D17V0C Arachis hypogaea HOM05D004385 ORTHO05D005245 2.6e-79 299.3 220 60.9
Gohir.A05G001100 Gossypium hirsutum HOM05D004385 ORTHO05D005245 2.6e-79 299.3 228 58.3
Nn1g09800 Nelumbo nucifera HOM05D004385 ORTHO05D005245 5.8e-79 298.1 219 60.3
Rhsim03G0268600 Rhododendron simsii HOM05D004385 ORTHO05D005245 5.8e-79 298.1 220 61.4
MSTRG.10464 Avicennia marina HOM05D004385 ORTHO05D005245 7.6e-79 297.7 220 61.4
Cc00_g00420 Coffea canephora HOM05D004385 ORTHO05D005245 9.9e-79 297.4 229 60.7
PGR142G0778 Punica granatum HOM05D004385 ORTHO05D005245 1.3e-78 297.0 217 62.7
ClCG06G014070 Citrullus lanatus HOM05D004385 ORTHO05D005245 1.7e-78 296.6 217 60.4
Oeu028831.1 Olea europaea HOM05D004385 ORTHO05D005245 1.7e-78 296.6 228 60.5
Psat0s5298g0040 Pisum sativum HOM05D004385 ORTHO05D005245 1.7e-78 296.6 243 57.2
ClCG06G014050 Citrullus lanatus HOM05D004385 ORTHO05D005245 2.2e-78 296.2 217 61.3
Hma1.2p1_0284F.1_g113840 Hydrangea macrophylla HOM05D004385 ORTHO05D005245 2.2e-78 296.2 220 61.8
Rhsim01G0218300 Rhododendron simsii HOM05D004385 ORTHO05D005245 2.2e-78 296.2 230 60.4
CsaV3_2G035400 Cucumis sativus L. HOM05D004385 ORTHO05D005245 4.9e-78 295.0 217 60.8
CsaV3_1G004600 Cucumis sativus L. HOM05D004385 ORTHO05D005245 6.4e-78 294.7 217 60.8
Medtr4g068240 Medicago truncatula HOM05D004385 ORTHO05D005245 6.4e-78 294.7 223 58.7
Medtr4g068270 Medicago truncatula HOM05D004385 ORTHO05D005245 6.4e-78 294.7 223 58.7
VMungo1127G2221 Vigna mungo HOM05D004385 ORTHO05D005245 8.4e-78 294.3 226 58.8
EL10Ac2g03630 Beta vulgaris HOM05D004385 ORTHO05D005245 1.1e-77 293.9 245 55.5
Cc00_g00450 Coffea canephora HOM05D004385 ORTHO05D005245 4.2e-77 292.0 229 59.0
Eucgr.C02022 Eucalyptus grandis HOM05D004385 ORTHO05D005245 5.4e-77 291.6 230 57.4
AUR62028001 Chenopodium quinoa HOM05D004385 ORTHO05D005245 7.1e-77 291.2 240 57.5
HPP92_003174 Vanilla planifolia HOM05D004385 ORTHO05D005245 1.2e-76 290.4 220 58.6
CDE06G1948 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 2.1e-76 289.7 216 58.3
Cpa.g.sc123.30 Carica papaya HOM05D004385 ORTHO05D005245 2.7e-76 289.3 215 59.5
Haze_19054 Corylus avellana HOM05D004385 ORTHO05D005245 4.6e-76 288.5 239 57.3
Migut.B00849 Erythranthe guttata HOM05D004385 ORTHO05D005245 6.0e-76 288.1 208 62.0
HanXRQChr03g0067221 Helianthus annuus HOM05D004385 ORTHO05D005245 3.0e-75 285.8 233 55.8
RhsimUnG0051500 Rhododendron simsii HOM05D004385 ORTHO05D005245 6.7e-75 284.6 227 58.6
SEGI_12293 Sequoiadendron giganteum HOM05D004385 ORTHO05D005245 6.7e-75 284.6 216 60.2
EL10Ac2g03634 Beta vulgaris HOM05D004385 ORTHO05D005245 1.1e-74 283.9 222 59.0
DCAR_023663 Daucus carota HOM05D004385 ORTHO05D005245 1.3e-73 280.4 224 57.6
MELO3C019214.2 Cucumis melo HOM05D004385 ORTHO05D005245 1.6e-73 280.0 254 52.8
Phvul.011G051300 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 3.6e-73 278.9 222 56.8
Duzib168G1467 Durio zibethinus HOM05D004385 ORTHO05D005245 4.8e-73 278.5 204 59.8
ECA240G4307 Erigeron canadensis HOM05D004385 ORTHO05D005245 4.8e-73 278.5 222 57.7
Cpa.g.sc123.32 Carica papaya HOM05D004385 ORTHO05D005245 8.1e-73 277.7 237 54.0
ATR1147G022 Amborella trichopoda HOM05D004385 ORTHO05D005245 1.1e-72 277.3 233 55.8
EL10Ac2g03633 Beta vulgaris HOM05D004385 ORTHO05D005245 1.1e-72 277.3 223 58.3
EL10Ac2g03631 Beta vulgaris HOM05D004385 ORTHO05D005245 9.0e-72 274.2 220 54.1
HanXRQChr03g0067391 Helianthus annuus HOM05D004385 ORTHO05D005245 9.0e-72 274.2 223 57.8
AUR62028000 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.2e-71 273.9 218 57.8
VMungo1127G1209 Vigna mungo HOM05D004385 ORTHO05D005245 2.6e-71 272.7 220 55.9
Atru.chr9.1512 Acer truncatum HOM05D004385 ORTHO05D005245 5.8e-71 271.6 234 54.7
SGA_v2.0_scaffold21G09624 Striga asiatica HOM05D004385 ORTHO05D005245 7.6e-71 271.2 216 56.5
TPR.G10229 Trifolium pratense HOM05D004385 ORTHO05D005245 1.3e-70 270.4 259 51.0
AUR62027997 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.8e-70 268.9 217 55.3
Phvul.011G051100 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 4.9e-70 268.5 222 55.4
Hund03234 Selenicereus undatus HOM05D004385 ORTHO05D005245 3.2e-69 265.8 226 57.1
Mapoly0055s0075 Marchantia polymorpha HOM05D004385 ORTHO05D005245 2.1e-68 263.1 216 53.2
Peaxi162Scf00320g00412 Petunia axillaris HOM05D004385 ORTHO05D005245 2.7e-68 262.7 220 57.3
AUR62020716 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.9e-66 256.5 220 54.1
AUR62028006 Chenopodium quinoa HOM05D004385 ORTHO05D005245 7.4e-66 254.6 219 53.9
Pp3c15_21680 Physcomitrium patens HOM05D004385 ORTHO05D005245 6.2e-65 251.5 216 51.9
AagrBONN_evm.TU.Sc2ySwM_117.1864 Anthoceros agrestis HOM05D004385 ORTHO05D005245 1.1e-64 250.8 216 50.9
Solyc07g015980.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.8e-64 250.0 179 64.8
Sabra18G0119900 Salix brachista HOM05D004385 ORTHO05D005245 1.8e-59 233.4 236 51.3
EL10Ac2g04866 Beta vulgaris HOM05D004385 ORTHO05D005245 2.3e-59 233.0 226 50.0
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 5.1e-59 231.9 218 48.6
Cpa.g.sc123.31 Carica papaya HOM05D004385 ORTHO05D005245 2.5e-58 229.6 187 56.1
EL10Ac2g03632 Beta vulgaris HOM05D004385 ORTHO05D005245 3.3e-58 229.2 217 53.9
Ah.11g043630 Amaranthus hybridus HOM05D004385 ORTHO05D005245 7.4e-58 228.0 231 50.6
CAN.G1581.2 Capsicum annuum HOM05D004385 ORTHO05D005245 1.6e-57 226.9 151 66.9
EL10Ac2g04868 Beta vulgaris HOM05D004385 ORTHO05D005245 3.4e-55 219.2 231 47.6
PGSC0003DMG400022081 Solanum tuberosum HOM05D004385 ORTHO05D005245 4.5e-55 218.8 190 55.3
Potri.018G145600 Populus trichocarpa HOM05D004385 ORTHO05D005245 5.9e-55 218.4 149 63.8
FAN22G1494 Fragaria x ananassa HOM05D004385 ORTHO05D005245 1.4e-53 213.8 160 58.8
FAN07G2444 Fragaria x ananassa HOM05D004385 ORTHO05D005245 2.5e-53 213.0 157 58.0
Ah.11g043620 Amaranthus hybridus HOM05D004385 ORTHO05D005245 3.2e-53 212.6 211 49.8
SalBow5G2207 Salvia bowleyana HOM05D004385 ORTHO05D005245 9.3e-53 211.1 146 63.7
Psat1g029120 Pisum sativum HOM05D000870 ORTHO05D000715 1.2e-52 210.7 161 57.1
Sopen07g016620 Solanum pennellii HOM05D004385 ORTHO05D005245 1.0e-51 207.6 149 61.7
MELO3C017386.2 Cucumis melo HOM05D004385 ORTHO05D005245 3.0e-51 206.1 169 55.0
Sopen00g013700 Solanum pennellii HOM05D004385 ORTHO05D005245 6.7e-51 204.9 150 60.7
Solyc07g016020.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 5.0e-46 188.7 153 56.9
TAR626G1477 Trochodendron aralioides HOM05D004385 ORTHO05D005245 1.9e-45 186.8 124 64.5
unitig_578.g16396 Utricularia gibba HOM05D004385 ORTHO05D005245 2.7e-44 183.0 125 64.8
PGSC0003DMG400021019 Solanum tuberosum HOM05D004385 ORTHO05D005245 5.7e-42 175.3 124 62.9
Atru.chr9.1488 Acer truncatum HOM05D004385 ORTHO05D005245 1.7e-41 173.7 124 59.7
Sc06g0001470 Simmondsia chinensis HOM05D004385 ORTHO05D005245 2.8e-41 172.9 124 58.1
TPR.G34194 Trifolium pratense HOM05D004385 ORTHO05D005245 8.2e-41 171.4 124 59.7
Zm00001eb064440 Zea mays HOM05D004385 ORTHO05D005245 2.4e-40 169.9 124 54.8
Solyc07g016040.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 4.1e-40 169.1 118 61.9
CDE06G1657 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 5.9e-39 165.2 185 45.4
AUR62028004 Chenopodium quinoa HOM05D004385 ORTHO05D005245 7.2e-37 158.3 128 54.7
PRCOL_00000420 Prasinoderma coloniale HOM05D004385 ORTHO05D005245 2.1e-36 156.8 208 39.4
AUR62020721 Chenopodium quinoa HOM05D004385 ORTHO05D005245 5.9e-31 138.7 108 53.7
Cre02.g105150 Chlamydomonas reinhardtii HOM05D004385 ORTHO05D005245 1.0e-30 137.9 281 30.6
Aqoxy2G04068 Aquilegia oxysepala HOM05D004385 ORTHO05D005245 1.5e-29 134.0 124 50.8
Psat0s3373g0120 Pisum sativum HOM05D000870 ORTHO05D005245 4.2e-29 132.5 161 41.0
Haze_18802 Corylus avellana HOM05D004385 ORTHO05D005245 3.6e-28 129.4 129 51.9
FAN17G2530 Fragaria x ananassa HOM05D004385 ORTHO05D005245 2.9e-22 109.8 78 62.8
Solyc07g016050.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 4.2e-21 105.9 72 62.5
Cfa020737 Carpinus fangiana HOM05D004385 ORTHO05D005245 4.4e-18 95.9 62 69.4
Solyc07g016080.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.8e-16 90.5 50 72.0
unitig_578.g16395 Utricularia gibba HOM05D004385 ORTHO05D005245 4.1e-16 89.4 62 61.3
CAN.G1581.3 Capsicum annuum HOM05D004385 ORTHO05D005245 1.6e-15 87.4 62 61.3
Oeu000968.1 Olea europaea HOM05D004385 ORTHO05D005245 2.3e-11 73.6 60 61.7


User provided reference genes

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