Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00384 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.8e-281 971.8 471 100.0
Migut.L00374 Erythranthe guttata HOM05D003519 ORTHO05D004443 5.5e-254 880.6 445 96.4
Migut.L00523 Erythranthe guttata HOM05D003519 ORTHO05D004443 2.1e-160 569.7 483 61.5
SalBow5G2644 Salvia bowleyana HOM05D003519 ORTHO05D004443 4.6e-160 568.5 516 58.5
Migut.L00372 Erythranthe guttata HOM05D003519 ORTHO05D004443 3.4e-155 552.4 483 60.2
Migut.O00452 Erythranthe guttata HOM05D003519 ORTHO05D004443 3.4e-155 552.4 483 60.5
Migut.L00383 Erythranthe guttata HOM05D003519 ORTHO05D004443 2.9e-154 549.3 483 60.0
MSTRG.15264 Avicennia marina HOM05D003519 ORTHO05D004443 1.4e-148 530.4 512 56.4
SGA_v2.0_scaffold3G01832 Striga asiatica HOM05D003519 ORTHO05D004443 9.1e-148 527.7 510 57.3
Migut.L00390 Erythranthe guttata HOM05D003519 ORTHO05D004443 8.5e-146 521.2 485 58.4
Migut.L00373 Erythranthe guttata HOM05D003519 ORTHO05D004443 3.5e-139 499.2 454 59.5
Migut.L00385 Erythranthe guttata HOM05D003519 ORTHO05D004443 2.2e-138 496.5 454 59.5
Migut.L00566 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.6e-136 490.3 470 57.2
Oeu050088.1 Olea europaea HOM05D003519 ORTHO05D004443 2.3e-135 486.5 459 56.4
Oeu050089.1 Olea europaea HOM05D003519 ORTHO05D004443 2.3e-135 486.5 459 56.4
Peaxi162Scf00711g00512 Petunia axillaris HOM05D003519 ORTHO05D004443 1.3e-133 480.7 530 48.5
Migut.L00387 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.7e-133 480.3 444 58.8
Migut.L00524 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.8e-132 476.9 453 58.1
TAR229G0003 Trochodendron aralioides HOM05D003519 ORTHO05D004443 5.3e-132 475.3 521 48.4
CSS0008781 Camellia sinensis var. sinensis HOM05D003519 ORTHO05D004443 2.0e-131 473.4 502 50.8
CSS0040411 Camellia sinensis var. sinensis HOM05D003519 ORTHO05D004443 2.0e-131 473.4 502 50.8
Nitab4.5_0000227g0340 Nicotiana tabacum HOM05D003519 ORTHO05D004443 3.5e-131 472.6 509 49.7
TAR381G0828 Trochodendron aralioides HOM05D003519 ORTHO05D004443 4.5e-131 472.2 517 48.4
Thecc.01G137200 Theobroma cacao HOM05D003519 ORTHO05D004443 5.0e-130 468.8 507 48.9
Nitab4.5_0003068g0020 Nicotiana tabacum HOM05D003519 ORTHO05D004443 1.5e-129 467.2 509 48.5
PGSC0003DMG400009336 Solanum tuberosum HOM05D003519 ORTHO05D004443 1.5e-129 467.2 502 48.8
TWI79G1726 Tripterygium wilfordii HOM05D003519 ORTHO05D004443 2.5e-129 466.5 515 48.9
TAR625G0887 Trochodendron aralioides HOM05D003519 ORTHO05D004443 2.5e-129 466.5 519 48.7
FvH4_1g24840 Fragaria vesca HOM05D003519 ORTHO05D004443 4.2e-129 465.7 518 47.7
Solyc04g076520.3 Solanum lycopersicum HOM05D003519 ORTHO05D004443 4.2e-129 465.7 502 48.4
Potri.005G067300 Populus trichocarpa HOM05D003519 ORTHO05D004443 5.5e-129 465.3 510 49.8
Actinidia06577 Actinidia chinensis HOM05D003519 ORTHO05D004443 7.2e-129 464.9 504 49.8
Rhsim08G0000500 Rhododendron simsii HOM05D003519 ORTHO05D004443 9.4e-129 464.5 521 48.6
Sopen04g030250 Solanum pennellii HOM05D003519 ORTHO05D004443 9.4e-129 464.5 502 48.4
CANSAT80G2376 Cannabis sativa HOM05D003519 ORTHO05D004443 1.0e-127 461.1 511 47.4
CAN.G475.7 Capsicum annuum HOM05D003519 ORTHO05D004443 1.0e-127 461.1 504 48.0
Manes.12G158800 Manihot esculenta HOM05D003519 ORTHO05D004443 1.0e-127 461.1 515 48.2
FAN26G0860 Fragaria x ananassa HOM05D003519 ORTHO05D004443 1.8e-127 460.3 505 48.1
Prupe.4G275200 Prunus persica HOM05D003519 ORTHO05D004443 2.3e-127 459.9 505 47.5
Atru.chr4.987 Acer truncatum HOM05D003519 ORTHO05D004443 3.0e-127 459.5 497 49.1
FAN23G1921 Fragaria x ananassa HOM05D003519 ORTHO05D004443 3.0e-127 459.5 525 47.0
RcHm_v2.0_Chr2g0122451 Rosa chinensis HOM05D003519 ORTHO05D004443 3.0e-127 459.5 501 48.7
Migut.L00386 Erythranthe guttata HOM05D003519 ORTHO05D004443 4.0e-127 459.1 437 57.7
FAN28G0413 Fragaria x ananassa HOM05D003519 ORTHO05D004443 5.2e-127 458.8 505 48.1
QL10p041283 Quercus lobata HOM05D003519 ORTHO05D004443 1.2e-126 457.6 516 47.5
Ciclev10000587m.g Citrus clementina HOM05D003519 ORTHO05D004443 2.0e-126 456.8 518 47.3
Cc00_g06200 Coffea canephora HOM05D003519 ORTHO05D004443 4.4e-126 455.7 488 50.0
Hma1.2p1_0310F.1_g121010 Hydrangea macrophylla HOM05D003519 ORTHO05D004443 7.5e-126 454.9 502 49.0
Sabra05G0055300 Salix brachista HOM05D003519 ORTHO05D004443 7.5e-126 454.9 498 49.4
CiPaw.03G118200 Carya illinoinensis HOM05D003519 ORTHO05D004443 9.8e-126 454.5 517 47.4
Migut.L00389 Erythranthe guttata HOM05D003519 ORTHO05D004443 2.8e-125 453.0 435 57.5
arahy.Tifrunner.gnm1.ann1.CM19QL Arachis hypogaea HOM05D003519 ORTHO05D004443 1.4e-124 450.7 514 47.5
PGR102G0700 Punica granatum HOM05D003519 ORTHO05D004443 1.4e-124 450.7 515 47.2
Gohir.D04G033200 Gossypium hirsutum HOM05D003519 ORTHO05D004443 2.4e-124 449.9 506 47.4
Haze_25334 Corylus avellana HOM05D003519 ORTHO05D004443 3.1e-124 449.5 517 47.0
arahy.Tifrunner.gnm1.ann1.JB39ED Arachis hypogaea HOM05D003519 ORTHO05D004443 5.4e-124 448.7 515 48.0
Hund21800 Selenicereus undatus HOM05D003519 ORTHO05D004443 7.0e-124 448.4 521 46.4
Duzib187G0434 Durio zibethinus HOM05D003519 ORTHO05D004443 1.2e-123 447.6 507 47.3
MD15G1134900 Malus domestica HOM05D003519 ORTHO05D004443 2.0e-123 446.8 503 47.7
Lsat_1_v5_gn_2_36940 Lactuca sativa HOM05D003519 ORTHO05D004443 2.7e-123 446.4 504 47.8
Potri.007G102000 Populus trichocarpa HOM05D003519 ORTHO05D004443 2.7e-123 446.4 512 47.1
Eucgr.H05140 Eucalyptus grandis HOM05D003519 ORTHO05D004443 3.5e-123 446.0 516 46.3
Lalb_Chr11g0068601 Lupinus albus HOM05D003519 ORTHO05D004443 1.0e-122 444.5 514 45.9
Gohir.A05G382700 Gossypium hirsutum HOM05D003519 ORTHO05D004443 1.3e-122 444.1 510 46.9
Gorai.012G036900 Gossypium raimondii HOM05D003519 ORTHO05D004443 1.3e-122 444.1 506 46.8
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 3.8e-122 442.6 510 47.1
Migut.L00388 Erythranthe guttata HOM05D003519 ORTHO05D004443 2.5e-121 439.9 443 56.2
DCAR_019993 Daucus carota HOM05D003519 ORTHO05D004443 4.2e-121 439.1 509 48.1
ECA238G3965 Erigeron canadensis HOM05D003519 ORTHO05D004443 1.6e-120 437.2 498 48.2
AUR62000513 Chenopodium quinoa HOM05D003519 ORTHO05D004443 2.1e-120 436.8 518 46.1
PSO063G6904 Papaver somniferum HOM05D003519 ORTHO05D004443 4.0e-119 432.6 512 46.5
PSO832G0337 Papaver somniferum HOM05D003519 ORTHO05D004443 4.0e-119 432.6 512 46.7
EL10Ac4g09622 Beta vulgaris HOM05D003519 ORTHO05D004443 5.2e-119 432.2 517 45.6
Psat5g059880 Pisum sativum HOM05D003519 ORTHO05D004443 5.2e-119 432.2 515 46.2
VMungo1309G2829 Vigna mungo HOM05D003519 ORTHO05D004443 5.2e-119 432.2 519 46.4
TPR.G33582 Trifolium pratense HOM05D003519 ORTHO05D004443 8.9e-119 431.4 514 45.1
Ca_16980_v3 Cicer arietinum L. HOM05D003519 ORTHO05D004443 1.2e-118 431.0 509 45.0
Glyma.08G002000 Glycine max HOM05D003519 ORTHO05D004443 1.5e-118 430.6 535 44.7
GSVIVG01022332001 Vitis vinifera HOM05D003519 ORTHO05D004443 2.0e-118 430.3 467 48.2
Medtr3g096670 Medicago truncatula HOM05D003519 ORTHO05D004443 4.4e-118 429.1 513 44.2
ClCG04G002210 Citrullus lanatus HOM05D003519 ORTHO05D004443 5.7e-118 428.7 515 45.0
Sed0005441 Sechium edule HOM05D003519 ORTHO05D004443 7.5e-118 428.3 501 46.9
THA.LOC104819485 Tarenaya hassleriana HOM05D003519 ORTHO05D004443 7.5e-118 428.3 515 45.8
Lalb_Chr23g0272671 Lupinus albus HOM05D003519 ORTHO05D004443 9.8e-118 427.9 514 44.4
Glyma.06G155700 Glycine max HOM05D003519 ORTHO05D004443 1.7e-117 427.2 520 46.9
Sabra07G0084100 Salix brachista HOM05D003519 ORTHO05D004443 2.8e-117 426.4 500 46.2
arahy.Tifrunner.gnm1.ann1.I6W5T3 Arachis hypogaea HOM05D003519 ORTHO05D004443 6.3e-117 425.2 477 48.4
MELO3C008911.2 Cucumis melo HOM05D003519 ORTHO05D004443 8.3e-117 424.9 514 44.6
CsaV3_4G030500 Cucumis sativus L. HOM05D003519 ORTHO05D004443 2.4e-116 423.3 515 45.4
Cpa.g.sc37.5 Carica papaya HOM05D003519 ORTHO05D004443 3.1e-116 422.9 479 48.2
arahy.Tifrunner.gnm1.ann1.02NDWK Arachis hypogaea HOM05D003519 ORTHO05D004443 2.0e-115 420.2 484 48.1
CDE06G0958 Ceratophyllum demersum HOM05D003519 ORTHO05D004443 4.5e-115 419.1 487 46.6
Phvul.009G154700 Phaseolus vulgaris HOM05D003519 ORTHO05D004443 4.5e-115 419.1 519 45.7
Ah.04g157880 Amaranthus hybridus HOM05D003519 ORTHO05D004443 5.9e-115 418.7 513 44.8
VMungo0251G1228 Vigna mungo HOM05D003519 ORTHO05D004443 1.0e-114 417.9 528 43.2
Lj2A614T30 Lonicera japonica HOM05D003519 ORTHO05D004443 1.3e-114 417.5 488 47.5
Sc09g0002240 Simmondsia chinensis HOM05D003519 ORTHO05D004443 6.6e-114 415.2 506 44.3
Nn1g08957 Nelumbo nucifera HOM05D003519 ORTHO05D004443 8.6e-114 414.8 482 47.3
Glyma.05G194000 Glycine max HOM05D003519 ORTHO05D004443 1.1e-113 414.5 516 44.6
Aqoxy5G02420 Aquilegia oxysepala HOM05D003519 ORTHO05D004443 5.6e-113 412.1 510 44.5
Migut.L00382 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.6e-112 410.6 432 54.2
Migut.L00522 Erythranthe guttata HOM05D003519 ORTHO05D004443 1.6e-112 410.6 432 54.2
MBI03_g39654_MAGBIO Magnolia biondii HOM05D003519 ORTHO05D004443 2.6e-110 403.3 525 43.8
Aa31LG9G16540 Aethionema arabicum HOM05D003519 ORTHO05D004443 6.4e-109 398.7 478 45.0
AL7G50860 Arabidopsis lyrata HOM05D003519 ORTHO05D004443 2.0e-107 393.7 469 45.2
AT5G39450 Arabidopsis thaliana HOM05D003519 ORTHO05D004443 7.8e-107 391.7 470 45.1
Sp7g02530 Schrenkiella parvula HOM05D003519 ORTHO05D004443 1.7e-106 390.6 480 44.0
PSO832G1142 Papaver somniferum HOM05D003519 ORTHO05D004443 8.6e-106 388.3 519 43.0
ATR0138G021 Amborella trichopoda HOM05D003519 ORTHO05D004443 5.6e-105 385.6 547 40.4
COL.COLO4_35812 Corchorus olitorius HOM05D003519 ORTHO05D004443 8.0e-104 381.7 452 45.4
SEGI_06784 Sequoiadendron giganteum HOM05D003519 ORTHO05D004443 1.4e-103 380.9 545 40.6
Carub.0007s3648 Capsella rubella HOM05D003519 ORTHO05D004443 5.8e-102 375.6 476 45.0
A04p12190 Brassica napus HOM05D003519 ORTHO05D004443 6.4e-101 372.1 473 43.3
Thhalv10027700m.g Eutrema salsugineum HOM05D003519 ORTHO05D004443 8.3e-101 371.7 473 43.8
BraA04t16883Z Brassica rapa HOM05D003519 ORTHO05D004443 1.4e-100 370.9 473 43.3
C04p45840 Brassica napus HOM05D003519 ORTHO05D004443 1.2e-99 367.9 476 42.6
CARHR262900 Cardamine hirsuta HOM05D003519 ORTHO05D004443 2.1e-99 367.1 479 42.6
BcaB06g27308 Brassica carinata HOM05D003519 ORTHO05D004443 2.7e-99 366.7 476 42.6
BcaB06g27330 Brassica carinata HOM05D003519 ORTHO05D004443 2.7e-99 366.7 477 42.6
PSO063G4810 Papaver somniferum HOM05D003519 ORTHO05D004443 6.6e-98 362.1 510 42.2
Ca_17623_v3 Cicer arietinum L. HOM05D003519 ORTHO05D004443 2.3e-95 353.6 548 37.2
CARHR262890 Cardamine hirsuta HOM05D003519 ORTHO05D004443 4.0e-95 352.8 448 43.5
FAN19G3005 Fragaria x ananassa HOM05D003519 ORTHO05D004443 5.2e-95 352.4 518 39.8
AL7G50820 Arabidopsis lyrata HOM05D003519 ORTHO05D004443 8.9e-95 351.7 470 42.8
BolC4t26170H Brassica oleracea HOM05D003519 ORTHO05D004443 8.9e-95 351.7 478 41.2
CARHR258220 Cardamine hirsuta HOM05D003519 ORTHO05D004443 8.9e-95 351.7 485 41.4
AT5G39460 Arabidopsis thaliana HOM05D003519 ORTHO05D004443 3.7e-93 346.3 473 41.2
BraA04t16884Z Brassica rapa HOM05D003519 ORTHO05D004443 4.9e-93 345.9 446 42.8
Zm00001eb174460 Zea mays HOM05D003519 ORTHO05D004443 8.3e-93 345.1 463 43.8
BolC4t26171H Brassica oleracea HOM05D003519 ORTHO05D004443 1.1e-92 344.7 469 42.6
COL.COLO4_35769 Corchorus olitorius HOM05D003519 ORTHO05D004443 5.4e-92 342.4 451 43.9
HPP92_006886 Vanilla planifolia HOM05D003519 ORTHO05D004443 9.2e-92 341.7 467 43.3
Sp7g02520 Schrenkiella parvula HOM05D003519 ORTHO05D004443 1.2e-91 341.3 450 42.0
Os08g0105100 Oryza sativa ssp. japonica HOM05D003519 ORTHO05D004443 3.5e-91 339.7 472 43.0
Phvul.002G274400 Phaseolus vulgaris HOM05D003519 ORTHO05D004443 6.0e-91 339.0 523 38.4
Psat7g045400 Pisum sativum HOM05D003519 ORTHO05D004443 7.8e-91 338.6 546 38.3
TPR.G37338 Trifolium pratense HOM05D003519 ORTHO05D004443 1.0e-90 338.2 576 37.2
BcaB06g27331 Brassica carinata HOM05D003519 ORTHO05D004443 1.1e-89 334.7 442 41.2
Pp3c17_16670 Physcomitrium patens HOM05D003519 ORTHO05D004443 1.1e-89 334.7 521 40.5
Pp3c14_13020 Physcomitrium patens HOM05D003519 ORTHO05D004443 1.5e-89 334.3 520 40.2
C04p45850 Brassica napus HOM05D003519 ORTHO05D004443 1.9e-89 334.0 442 41.4
BcaB06g27312 Brassica carinata HOM05D003519 ORTHO05D004443 2.5e-89 333.6 441 40.6
C04p45890 Brassica napus HOM05D003519 ORTHO05D004443 2.5e-89 333.6 441 40.6
Medtr8g094190 Medicago truncatula HOM05D003519 ORTHO05D004443 3.6e-88 329.7 528 38.6
BcaB06g27309 Brassica carinata HOM05D003519 ORTHO05D004443 8.1e-88 328.6 443 41.3
A04p12200 Brassica napus HOM05D003519 ORTHO05D004443 3.1e-87 326.6 443 41.1
Sp7g02470 Schrenkiella parvula HOM05D003519 ORTHO05D004443 8.9e-87 325.1 482 39.8
A04p12220 Brassica napus HOM05D003519 ORTHO05D004443 1.5e-86 324.3 441 41.3
AT5G39480 Arabidopsis thaliana HOM05D003519 ORTHO05D004443 4.4e-86 322.8 464 40.5
AT5G39490 Arabidopsis thaliana HOM05D003519 ORTHO05D004443 3.8e-85 319.7 464 39.2
Sp7g02490 Schrenkiella parvula HOM05D003519 ORTHO05D004443 3.8e-85 319.7 460 40.2
AL7G50850 Arabidopsis lyrata HOM05D003519 ORTHO05D004443 1.4e-84 317.8 430 41.6
A04p12230 Brassica napus HOM05D003519 ORTHO05D004443 1.9e-84 317.4 446 40.1
CDE08G0134 Ceratophyllum demersum HOM05D003519 ORTHO05D004443 3.2e-84 316.6 481 39.5
BcaB06g27311 Brassica carinata HOM05D003519 ORTHO05D004443 1.6e-83 314.3 449 39.6
CARHR262880 Cardamine hirsuta HOM05D003519 ORTHO05D004443 1.1e-81 308.1 475 38.3
CARHR262850 Cardamine hirsuta HOM05D003519 ORTHO05D004443 2.1e-80 303.9 445 40.0
C04p45870 Brassica napus HOM05D003519 ORTHO05D004443 3.6e-80 303.1 449 39.4
PSO832G2795 Papaver somniferum HOM05D003519 ORTHO05D004443 3.8e-77 293.1 471 40.1
HPP92_025170 Vanilla planifolia HOM05D003519 ORTHO05D004443 2.3e-74 283.9 478 38.5
SMO137G0098 Selaginella moellendorffii HOM05D003519 ORTHO05D004443 1.4e-60 238.0 279 44.4
AL7G50830 Arabidopsis lyrata HOM05D003519 ORTHO05D004443 1.5e-57 228.0 374 37.4
Medtr8g094150 Medicago truncatula HOM05D003519 ORTHO05D004443 1.4e-55 221.5 563 30.7
Medtr0095s0110 Medicago truncatula HOM05D003519 ORTHO05D004443 1.3e-50 204.9 180 55.6
BcaB06g27739 Brassica carinata HOM05D003519 ORTHO05D004443 5.1e-50 203.0 412 33.7
MBI03_g31895_MAGBIO Magnolia biondii HOM05D003519 ORTHO05D004443 6.7e-50 202.6 242 45.5
Migut.L00375 Erythranthe guttata HOM05D003519 ORTHO05D004443 5.5e-44 183.0 133 64.7
Lj4g0010335 Lotus japonicus HOM05D003519 ORTHO05D004443 7.2e-36 156.0 448 26.8
BolC4t26573H Brassica oleracea HOM05D003519 ORTHO05D021767 1.8e-23 114.8 79 60.8
BraA04t17193Z Brassica rapa HOM05D003519 ORTHO05D021767 7.0e-23 112.8 84 58.3
CARHR262910 Cardamine hirsuta HOM05D003519 ORTHO05D004443 4.5e-22 110.2 146 43.8
BcaC02g08848 Brassica carinata HOM05D003519 ORTHO05D021767 1.0e-21 109.0 72 62.5
BcaC02g08849 Brassica carinata HOM05D003519 ORTHO05D021767 1.0e-21 109.0 72 62.5
C04p49850 Brassica napus HOM05D003519 ORTHO05D021767 5.0e-21 106.7 70 62.9
A04p15580 Brassica napus HOM05D003519 ORTHO05D021767 6.5e-21 106.3 70 62.9
BcaB06g27313 Brassica carinata HOM05D003519 ORTHO05D024023 8.5e-21 105.9 174 38.5
C04p45910 Brassica napus HOM05D003519 ORTHO05D024023 3.2e-20 104.0 159 40.3
BolC4t26173H Brassica oleracea HOM05D003519 ORTHO05D024023 4.2e-20 103.6 159 40.3
BcaB06g27335 Brassica carinata HOM05D003519 ORTHO05D004443 4.7e-19 100.1 86 53.5
ATR0582G058 Amborella trichopoda HOM05D003519 ORTHO05D004443 8.8e-18 95.9 79 55.7
BcaB06g27333 Brassica carinata HOM05D003519 ORTHO05D004443 8.8e-18 95.9 67 61.2
AagrBONN_evm.TU.Sc2ySwM_228.359 Anthoceros agrestis HOM05D003519 ORTHO05D004443 2.4e-15 87.8 78 55.1
Peaxi162Scf00711g00528 Petunia axillaris HOM05D003519 ORTHO05D024023 5.4e-15 86.7 65 55.4
Peaxi162Scf00711g00524 Petunia axillaris HOM05D003519 ORTHO05D004443 1.7e-13 81.6 144 36.8
BcaB06g27334 Brassica carinata HOM05D003519 ORTHO05D004443 1.7e-08 65.1 58 50.0
SEGI_40678 Sequoiadendron giganteum HOM05D026239 ORTHO05D021294 1.1e-07 62.4 160 28.8


User provided reference genes

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