Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 3.5e-106 388.3 192 100.0
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 3.5e-106 388.3 192 100.0
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 2.4e-99 365.5 192 91.1
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 5.4e-99 364.4 192 91.1
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 4.6e-98 361.3 192 90.1
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 5.1e-97 357.8 192 90.6
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 6.6e-97 357.5 191 89.5
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 6.6e-97 357.5 191 89.5
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 2.5e-96 355.5 191 89.5
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 3.3e-96 355.1 192 89.6
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 7.3e-96 354.0 192 88.5
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 7.3e-96 354.0 192 89.1
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 7.3e-96 354.0 191 90.6
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 9.6e-96 353.6 191 88.5
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 9.6e-96 353.6 192 87.5
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 1.6e-95 352.8 190 88.4
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 2.1e-95 352.4 191 87.4
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 3.6e-95 351.7 191 87.4
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 3.6e-95 351.7 192 87.5
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 3.6e-95 351.7 192 87.5
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 6.2e-95 350.9 192 87.5
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 8.1e-95 350.5 191 86.9
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 8.1e-95 350.5 191 87.4
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 1.1e-94 350.1 190 86.8
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 1.8e-94 349.4 190 89.5
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 3.1e-94 348.6 190 86.3
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 4.0e-94 348.2 190 87.4
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 5.2e-94 347.8 190 85.8
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 9.0e-94 347.1 190 88.4
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 1.2e-93 346.7 190 86.8
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 1.2e-93 346.7 192 85.9
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 1.2e-93 346.7 190 85.8
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 2.0e-93 345.9 190 87.4
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 2.6e-93 345.5 190 87.4
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 3.4e-93 345.1 190 86.3
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 3.4e-93 345.1 190 86.3
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 3.4e-93 345.1 188 87.8
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 3.4e-93 345.1 190 86.8
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 4.4e-93 344.7 190 85.8
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 4.4e-93 344.7 190 85.8
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 4.4e-93 344.7 192 85.9
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 4.4e-93 344.7 192 85.4
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 4.4e-93 344.7 190 85.8
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 4.4e-93 344.7 187 86.1
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 5.8e-93 344.4 190 85.3
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 7.6e-93 344.0 190 85.3
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 9.9e-93 343.6 190 86.3
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 1.3e-92 343.2 190 85.3
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 1.7e-92 342.8 190 84.7
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 1.7e-92 342.8 190 85.3
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 1.7e-92 342.8 190 86.3
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 2.2e-92 342.4 192 85.4
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 4.9e-92 341.3 190 84.7
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 4.9e-92 341.3 190 84.7
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 4.9e-92 341.3 190 84.7
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 4.9e-92 341.3 192 85.4
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 8.4e-92 340.5 190 84.2
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 1.4e-91 339.7 190 85.3
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 1.4e-91 339.7 190 84.2
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 2.4e-91 339.0 186 84.9
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 2.4e-91 339.0 190 84.7
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 5.4e-91 337.8 190 83.7
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 7.1e-91 337.4 190 83.7
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 2.1e-90 335.9 190 83.7
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 2.7e-90 335.5 191 84.8
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 6.0e-90 334.3 230 73.9
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 1.3e-89 333.2 190 83.2
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 1.7e-89 332.8 190 82.1
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 2.3e-89 332.4 190 82.6
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 3.9e-89 331.6 190 83.7
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 5.1e-89 331.3 194 82.5
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 8.7e-89 330.5 216 74.5
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 3.3e-88 328.6 180 87.8
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 5.6e-88 327.8 192 82.3
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 5.6e-88 327.8 244 70.5
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 2.1e-87 325.9 190 82.6
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 3.6e-87 325.1 190 82.1
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.8e-87 324.7 207 77.3
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 6.2e-87 324.3 190 82.1
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 6.2e-87 324.3 190 82.1
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 8.1e-87 323.9 192 80.7
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 6.9e-86 320.9 177 84.2
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 1.5e-85 319.7 192 80.7
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 5.8e-85 317.8 190 78.9
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 2.2e-84 315.8 196 79.1
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 2.9e-84 315.5 174 87.4
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 6.4e-84 314.3 201 75.6
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 8.4e-84 313.9 168 89.3
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 1.1e-83 313.5 164 90.9
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.4e-83 313.2 176 87.5
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 2.4e-83 312.4 192 80.7
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 4.6e-82 308.1 164 86.0
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 7.9e-82 307.4 177 80.2
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.3e-81 306.6 190 77.9
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 1.3e-76 290.0 190 71.6
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.2e-76 289.3 169 82.8
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 2.1e-74 282.7 156 84.6
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 3.5e-74 282.0 197 71.6
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 1.7e-68 263.1 159 81.8
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.2e-68 262.7 160 81.2
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 4.9e-68 261.5 134 92.5
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.2e-67 258.5 158 79.7
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 8.7e-65 250.8 136 88.2
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 1.5e-64 250.0 194 66.0
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 2.8e-63 245.7 164 73.2
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.8e-63 245.0 224 59.4
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 1.5e-61 240.0 192 62.0
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 1.1e-59 233.8 192 66.1
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 1.4e-57 226.9 175 61.7
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 3.0e-57 225.7 191 58.6
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 8.8e-57 224.2 173 61.3
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 1.3e-55 220.3 135 80.0
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 4.8e-55 218.4 112 92.0
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 3.2e-51 205.7 178 54.5
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.2e-51 205.3 168 63.1
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 5.7e-48 194.9 148 62.2
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 2.9e-44 182.6 110 76.4
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 1.4e-41 173.7 142 54.9
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 4.5e-37 158.7 106 67.0
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 7.7e-37 157.9 144 47.9
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 4.1e-30 135.6 132 57.6
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 5.9e-29 131.7 169 46.2
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 1.7e-28 130.2 134 55.2
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.7e-26 122.9 130 56.2
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 3.4e-24 115.9 126 49.2
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.1e-22 109.4 68 75.0
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.7e-20 103.6 217 37.3
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.8e-20 102.4 130 47.7
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.2e-19 98.2 120 49.2
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 2.3e-17 93.2 53 84.9
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 6.8e-17 91.7 59 74.6
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 7.8e-13 78.2 57 63.2
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 5.6e-11 72.0 47 72.3
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 3.4e-08 62.8 33 78.8
Dinv38404 Davidia involucrata HOM05D005644 ORTHO05D007092 4.9e-07 58.9 61 57.4
MBI16_g04464_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 8.3e-07 58.2 103 37.9


User provided reference genes

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