Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 4.5e-256 887.5 470 100.0
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 9.3e-169 597.4 476 68.7
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.6e-168 596.7 476 68.7
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 3.4e-155 552.4 481 66.9
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 2.7e-152 542.7 422 67.8
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.4e-148 529.6 411 67.2
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 7.9e-144 514.6 474 58.4
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 3.9e-143 512.3 376 69.7
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 8.8e-143 511.1 483 59.2
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 1.5e-142 510.4 481 59.5
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 2.2e-141 506.5 379 68.1
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 2.2e-141 506.5 471 59.4
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 2.4e-140 503.1 460 60.0
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 3.1e-140 502.7 479 61.2
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 7.0e-140 501.5 473 56.9
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 9.1e-140 501.1 381 67.5
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 9.1e-140 501.1 475 57.7
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 3.5e-139 499.2 473 60.3
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 1.0e-138 497.7 410 62.7
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 6.5e-138 495.0 369 67.5
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 1.1e-137 494.2 413 63.7
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.2e-137 492.7 369 67.2
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 4.2e-137 492.3 492 58.3
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 7.2e-137 491.5 376 67.0
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.4e-137 491.1 369 66.7
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 8.0e-136 488.0 370 68.4
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 9.7e-134 481.1 392 62.5
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 1.7e-133 480.3 476 56.5
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 2.8e-133 479.6 403 66.3
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 4.1e-132 475.7 471 55.2
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 5.3e-132 475.3 408 61.8
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 2.0e-131 473.4 428 60.0
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 2.6e-131 473.0 460 57.0
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 2.9e-130 469.5 407 60.9
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.5e-129 467.2 348 66.7
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 1.2e-128 464.2 540 51.3
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 3.6e-128 462.6 362 66.0
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 8.0e-128 461.5 480 56.0
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.0e-127 461.1 362 65.7
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.4e-127 460.7 490 53.9
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 5.2e-127 458.8 416 57.7
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 8.8e-127 458.0 479 53.4
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 1.2e-126 457.6 416 57.7
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.2e-126 457.6 415 57.8
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.5e-126 457.2 402 59.7
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 1.5e-126 457.2 388 61.3
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 1.5e-126 457.2 370 63.0
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 2.6e-126 456.4 373 62.5
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 4.4e-126 455.7 367 62.4
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 5.7e-126 455.3 370 63.5
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 2.2e-125 453.4 377 62.1
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 1.1e-124 451.1 484 53.5
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.1e-124 449.5 369 63.1
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 7.7e-123 444.9 373 63.3
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.7e-122 443.7 371 60.6
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 1.7e-122 443.7 394 58.4
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 1.7e-122 443.7 471 51.8
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 2.9e-122 443.0 474 50.8
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 2.9e-122 443.0 367 61.3
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 2.9e-122 443.0 369 61.5
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.1e-121 441.0 378 60.6
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 4.2e-121 439.1 357 63.9
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 7.2e-121 438.3 459 52.7
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 2.1e-120 436.8 371 59.8
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 3.6e-120 436.0 299 70.2
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 4.7e-120 435.6 354 63.0
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 1.8e-119 433.7 364 61.3
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 3.0e-119 433.0 369 60.2
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.2e-119 432.2 358 60.6
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 5.2e-119 432.2 367 62.4
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.8e-119 431.8 362 61.9
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.5e-118 430.6 446 52.9
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.8e-118 427.9 371 60.4
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 1.3e-117 427.6 336 66.1
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 3.7e-117 426.0 371 58.0
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 8.3e-117 424.9 336 64.6
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 1.8e-116 423.7 409 56.2
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 4.1e-116 422.5 326 65.3
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.6e-115 420.6 381 58.0
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 5.9e-115 418.7 320 65.3
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.3e-114 417.5 362 59.4
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 6.6e-114 415.2 398 56.0
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 5.5e-113 412.1 364 57.7
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 4.0e-111 406.0 330 62.7
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 8.9e-111 404.8 381 56.7
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.9e-111 404.8 341 61.6
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 6.8e-103 378.6 309 64.1
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 9.8e-102 374.8 310 61.3
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.2e-101 373.6 342 58.5
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.9e-100 370.5 399 52.1
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 2.4e-100 370.2 309 63.1
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.0e-98 364.8 306 58.5
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 1.5e-97 360.9 269 65.8
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.9e-97 360.5 349 55.3
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 2.9e-93 346.7 266 63.2
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.9e-93 345.9 381 50.9
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 1.2e-88 331.3 410 48.8
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.4e-79 301.2 251 62.9
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.9e-77 293.5 330 52.1
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 8.7e-74 282.0 234 60.7
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 3.3e-73 280.0 276 56.9
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 9.9e-70 268.5 312 45.5
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.7e-69 267.7 291 51.5
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 1.1e-65 255.0 219 61.2
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.1e-65 255.0 253 54.9
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 4.3e-65 253.1 293 50.9
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 4.0e-63 246.5 202 63.4
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.9e-58 229.9 263 52.5
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 8.1e-56 222.2 240 52.5
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.1e-52 211.8 255 45.5
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 5.7e-49 199.5 309 38.2
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 2.8e-48 197.2 197 51.3
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 7.1e-44 182.6 121 71.9
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 2.0e-38 164.5 207 46.9
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 7.7e-38 162.5 198 48.0
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 9.4e-36 155.6 112 67.0
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 1.6e-35 154.8 158 51.3
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 1.9e-28 131.3 168 42.9
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 4.2e-28 130.2 99 67.7
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.6e-27 128.3 105 62.9
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 2.7e-27 127.5 245 37.1
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 1.4e-26 125.2 106 63.2
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 3.9e-26 123.6 88 67.0
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 3.3e-25 120.6 110 54.5
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 4.4e-25 120.2 192 43.2
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 4.1e-23 113.6 78 69.2
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 2.2e-21 107.8 66 75.8
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 6.5e-21 106.3 144 46.5
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 6.5e-21 106.3 208 35.6
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.9e-20 104.8 336 28.0
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 5.5e-20 103.2 63 76.2
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 9.4e-20 102.4 237 32.5
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.6e-19 101.7 389 24.9
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 8.8e-18 95.9 107 47.7
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 1.1e-17 95.5 194 33.0
Mapoly0003s0267 Marchantia polymorpha HOM05D032652 ORTHO05D005510 1.8e-15 88.2 331 27.8
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 3.8e-13 80.5 283 27.6
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 1.5e-12 78.6 70 62.9
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 1.9e-12 78.2 283 27.2
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 3.2e-12 77.4 250 27.2
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 7.2e-12 76.3 56 60.7
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 3.6e-11 73.9 62 59.7
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 1.8e-10 71.6 289 26.0
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 2.2e-08 64.7 337 25.5
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 4.8e-08 63.5 63 47.6
MCO15G091 Micromonas commoda HOM05D036318 ORTHO05D005510 3.1e-07 60.8 353 24.6
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 7.0e-07 59.7 194 24.2


User provided reference genes

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