Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 5.6e-203 710.7 350 100.0
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 4.8e-154 548.1 338 79.0
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 4.1e-145 518.5 345 74.8
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 5.0e-143 511.5 341 73.3
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 9.4e-142 507.3 341 73.0
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 6.8e-140 501.1 337 72.7
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 6.8e-140 501.1 344 71.5
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 2.0e-139 499.6 352 69.9
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 5.7e-139 498.0 350 71.1
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 5.7e-139 498.0 333 73.0
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 1.3e-138 496.9 336 73.5
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.3e-138 496.9 352 70.7
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 1.7e-135 486.5 335 71.6
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 3.8e-135 485.3 335 71.3
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 6.5e-135 484.6 345 69.9
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.1e-134 483.8 335 71.0
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 1.5e-134 483.4 328 72.9
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 1.5e-134 483.4 348 69.3
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 2.5e-134 482.6 346 69.7
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 5.5e-134 481.5 337 71.5
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 9.5e-134 480.7 333 71.5
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 4.7e-133 478.4 329 70.8
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 1.4e-132 476.9 339 69.9
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 5.2e-132 474.9 336 70.8
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 4.4e-131 471.9 345 69.3
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 7.5e-131 471.1 324 69.4
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 7.5e-131 471.1 327 70.6
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 9.8e-131 470.7 349 66.8
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 4.9e-130 468.4 344 68.0
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 4.9e-130 468.4 328 70.7
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 8.3e-130 467.6 336 67.9
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 1.4e-129 466.8 348 68.4
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 4.1e-129 465.3 320 71.6
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 9.2e-129 464.2 327 70.0
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 5.0e-127 458.4 345 68.7
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 1.5e-126 456.8 332 69.3
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.6e-125 453.4 325 68.9
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 2.8e-125 452.6 339 65.5
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 2.8e-125 452.6 318 69.8
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 6.1e-125 451.4 317 69.4
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 1.4e-124 450.3 318 69.2
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 1.8e-124 449.9 324 67.9
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 1.8e-124 449.9 324 67.9
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 4.0e-124 448.7 325 67.4
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 5.2e-124 448.4 332 67.8
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 6.8e-124 448.0 326 69.0
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 8.9e-124 447.6 344 65.1
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 8.9e-124 447.6 309 70.6
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 1.2e-123 447.2 312 69.6
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.5e-123 446.8 333 66.7
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 2.6e-123 446.0 311 69.8
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 4.4e-123 445.3 307 71.0
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 4.9e-122 441.8 310 67.4
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 6.4e-122 441.4 326 66.9
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 6.4e-122 441.4 326 66.9
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 6.4e-122 441.4 330 65.8
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.9e-121 439.9 312 69.2
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 7.0e-121 438.0 343 64.4
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 3.5e-120 435.6 348 66.7
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 7.8e-120 434.5 320 66.9
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 1.7e-119 433.3 321 66.0
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 1.7e-119 433.3 330 65.5
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 6.6e-119 431.4 314 68.2
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 8.6e-119 431.0 314 68.2
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 8.6e-119 431.0 331 64.7
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 5.6e-118 428.3 340 62.9
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 7.3e-118 427.9 309 67.3
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.6e-117 426.8 313 65.8
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 2.1e-117 426.4 310 66.1
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 4.7e-117 425.2 340 62.4
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 1.8e-116 423.3 312 66.7
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 9.8e-115 417.5 354 62.7
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.2e-112 410.6 312 62.2
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 2.7e-112 409.5 334 62.6
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 2.5e-110 402.9 292 67.8
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.8e-108 396.7 368 59.0
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 8.9e-108 394.4 329 63.2
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 4.4e-107 392.1 267 70.4
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 9.9e-107 391.0 292 69.2
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 1.1e-105 387.5 317 62.8
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 3.6e-101 372.5 309 61.2
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 4.4e-99 365.5 346 56.1
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 3.5e-96 355.9 256 71.1
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 6.6e-95 351.7 275 64.7
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 3.6e-93 345.9 235 71.9
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 4.0e-92 342.4 224 75.4
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 2.3e-87 326.6 320 55.9
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 5.1e-87 325.5 298 55.0
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 1.7e-82 310.5 316 50.0
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 6.0e-80 302.0 333 49.8
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 2.3e-79 300.1 210 69.0
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 8.1e-77 291.6 311 46.9
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 3.8e-74 282.7 203 67.0
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 8.4e-74 281.6 306 51.0
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 3.3e-70 269.6 203 64.5
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 1.4e-65 254.2 198 65.7
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 3.3e-62 243.0 341 41.3
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 3.1e-60 236.5 354 37.6
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 1.8e-55 220.7 259 43.2
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 6.7e-55 218.8 170 62.9
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.4e-47 194.5 301 39.2
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 3.3e-46 189.9 200 50.5
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 2.0e-38 164.1 207 44.9
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 3.7e-37 159.8 135 57.0
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 8.0e-32 142.1 90 75.6
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 4.0e-31 139.8 343 30.6
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 8.8e-31 138.7 115 59.1
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 8.8e-31 138.7 102 68.6
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 2.6e-30 137.1 124 58.9
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 2.6e-30 137.1 88 73.9
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 2.2e-29 134.0 100 63.0
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 9.1e-28 128.6 91 71.4
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 3.0e-23 113.6 285 29.1
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 3.4e-22 110.2 132 43.9
Mapoly0026s0052 Marchantia polymorpha HOM05D000224 ORTHO05D001489 1.2e-08 65.1 160 28.1
Mapoly0212s0011 Marchantia polymorpha HOM05D000224 ORTHO05D001489 8.0e-08 62.4 160 26.9
AUR62017447 Chenopodium quinoa HOM05D000916 ORTHO05D007921 3.4e-06 57.0 145 30.3
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 3.4e-06 57.0 30 76.7


User provided reference genes

Program Settings