Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 1.8e-205 719.5 529 100.0
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 3.9e-115 419.5 413 79.7
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 1.0e-102 378.3 412 78.9
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 2.2e-102 377.1 416 69.0
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 1.5e-95 354.4 400 77.5
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 8.5e-94 348.6 413 71.9
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 1.4e-93 347.8 414 72.5
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 5.5e-93 345.9 400 73.0
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 1.2e-92 344.7 413 73.6
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 2.1e-92 344.0 401 69.1
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 2.1e-92 344.0 404 73.0
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 2.1e-92 344.0 397 72.8
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 1.0e-91 341.7 404 71.5
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 5.1e-91 339.3 411 72.5
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 3.3e-90 336.7 410 67.6
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 4.4e-90 336.3 404 67.6
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 5.7e-90 335.9 372 77.4
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 7.4e-90 335.5 405 71.6
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 9.7e-90 335.1 403 78.4
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.2e-89 334.0 402 73.4
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 2.2e-89 334.0 413 65.4
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 2.8e-89 333.6 416 68.3
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 8.2e-89 332.0 401 60.3
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 8.2e-89 332.0 397 71.5
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 2.4e-88 330.5 370 74.6
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 2.4e-88 330.5 410 73.2
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 5.3e-88 329.3 403 67.7
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 9.1e-88 328.6 404 66.1
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 1.5e-87 327.8 404 72.3
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 2.0e-87 327.4 416 68.8
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 7.7e-87 325.5 400 59.5
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 1.3e-86 324.7 418 65.8
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 8.5e-86 322.0 415 57.1
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 1.1e-85 321.6 417 73.1
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.1e-85 321.6 421 67.9
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.2e-85 319.7 416 69.0
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 7.2e-85 318.9 247 81.0
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 7.2e-85 318.9 393 66.7
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 2.7e-84 317.0 416 70.4
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 3.6e-84 316.6 415 64.8
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 6.1e-84 315.8 412 72.3
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 6.1e-84 315.8 250 76.4
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 8.0e-84 315.5 486 58.8
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 6.7e-83 312.4 418 70.6
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 6.7e-83 312.4 415 68.4
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 6.7e-83 312.4 395 68.1
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 2.0e-82 310.8 430 62.3
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 2.6e-82 310.5 416 65.9
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 2.6e-82 310.5 413 70.5
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.4e-82 309.7 248 73.4
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 4.4e-82 309.7 248 73.4
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 9.7e-82 308.5 407 64.4
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 1.3e-81 308.1 448 61.4
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 1.3e-81 308.1 411 68.6
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.7e-81 307.8 247 76.5
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 2.8e-81 307.0 207 83.1
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 6.3e-81 305.8 409 64.8
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 6.3e-81 305.8 409 68.7
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.1e-80 305.1 407 67.3
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 1.1e-80 305.1 246 78.0
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.8e-80 304.3 243 73.7
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 2.4e-80 303.9 416 68.8
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 9.1e-80 302.0 260 66.2
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.2e-79 301.6 410 68.0
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 1.6e-79 301.2 408 65.0
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 7.7e-79 298.9 209 82.3
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.7e-78 297.7 243 72.8
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 3.8e-78 296.6 406 62.6
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 6.5e-78 295.8 379 67.8
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 6.5e-78 295.8 240 75.4
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 2.5e-77 293.9 424 62.5
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 2.5e-77 293.9 209 78.5
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 3.2e-77 293.5 351 63.5
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 4.2e-77 293.1 405 64.2
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 4.2e-77 293.1 424 55.9
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 5.5e-77 292.7 418 70.1
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.2e-76 291.6 254 67.3
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 1.4e-75 288.1 406 62.8
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 5.2e-75 286.2 258 70.5
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 1.5e-74 284.6 341 68.0
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 4.8e-73 279.6 427 62.8
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.1e-72 278.5 410 69.3
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 7.7e-71 272.3 212 74.5
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 2.2e-70 270.8 164 81.7
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 2.2e-70 270.8 438 59.8
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.6e-68 264.6 164 80.5
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 2.2e-65 254.2 188 72.3
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 3.7e-65 253.4 160 76.2
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 5.4e-64 249.6 147 83.7
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 7.0e-64 249.2 164 74.4
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 2.3e-62 244.2 164 72.0
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 2.9e-62 243.8 164 72.0
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 2.9e-62 243.8 164 72.0
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 2.9e-62 243.8 164 72.0
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 1.1e-61 241.9 164 71.3
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.6e-60 238.0 159 74.2
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 1.0e-59 235.3 262 58.0
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 6.8e-59 232.6 207 67.1
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 4.4e-58 229.9 206 66.0
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 3.7e-57 226.9 164 68.9
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 9.2e-56 222.2 193 60.6
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 3.6e-52 210.3 200 63.0
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.1e-48 198.7 163 60.1
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.1e-48 198.7 163 60.1
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.5e-47 193.7 165 60.0
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.5e-47 193.7 165 60.0
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 3.0e-46 190.7 153 75.8
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 1.9e-37 161.4 152 58.6
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 1.6e-31 141.7 185 49.7
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 2.0e-26 124.8 166 45.2
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 1.6e-23 115.2 161 42.2
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 6.0e-23 113.2 159 43.4
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 9.9e-18 95.9 61 78.7
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 2.1e-15 88.2 139 38.8
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 3.1e-11 74.3 259 61.8
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 2.6e-10 71.2 95 44.2
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 5.8e-10 70.1 112 38.4
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 1.0e-06 59.3 82 42.7
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 1.8e-06 58.5 103 38.8
TWI36G1055 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 3.0e-06 57.8 103 36.9
TWI75G0967 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 5.1e-06 57.0 103 35.9
TWI75G1441 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 5.1e-06 57.0 103 35.9
CARHR009720 Cardamine hirsuta HOM05D005498 ORTHO05D006719 8.7e-06 56.2 103 35.0
ECA246G1673 Erigeron canadensis HOM05D005498 ORTHO05D006719 8.7e-06 56.2 103 35.0


User provided reference genes

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