Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00277 Erythranthe guttata HOM05D000938 ORTHO05D001451 8.4e-62 240.4 137 100.0
Migut.L00579 Erythranthe guttata HOM05D000938 ORTHO05D001451 4.6e-44 181.4 117 85.5
SGA_v2.0_scaffold273G46466 Striga asiatica HOM05D000938 ORTHO05D001451 1.0e-22 110.5 120 55.8
SGA_v2.0_scaffold54G19616 Striga asiatica HOM05D000938 ORTHO05D001451 8.5e-22 107.5 121 52.9
Migut.H00821 Erythranthe guttata HOM05D000938 ORTHO05D001451 2.5e-21 105.9 123 55.3
SGA_v2.0_scaffold107G30767 Striga asiatica HOM05D000938 ORTHO05D001451 1.4e-19 100.1 117 53.0
MSTRG.23491 Avicennia marina HOM05D000938 ORTHO05D001451 3.4e-18 95.5 122 47.5
SalBow7G1570 Salvia bowleyana HOM05D000938 ORTHO05D001451 1.3e-17 93.6 122 51.6
Dinv29655 Davidia involucrata HOM05D000938 ORTHO05D001451 3.1e-16 89.0 122 47.5
vmacro12751 Vaccinium macrocarpon HOM05D000938 ORTHO05D001451 4.1e-16 88.6 120 47.5
Cc02_g33890 Coffea canephora HOM05D000938 ORTHO05D001451 7.0e-16 87.8 120 45.0
Dinv36347 Davidia involucrata HOM05D000938 ORTHO05D001451 7.0e-16 87.8 122 46.7
arahy.Tifrunner.gnm1.ann1.GX4ZEE Arachis hypogaea HOM05D000938 ORTHO05D001451 2.0e-15 86.3 118 48.3
arahy.Tifrunner.gnm1.ann1.Q4LS46 Arachis hypogaea HOM05D000938 ORTHO05D001451 2.7e-15 85.9 118 48.3
Lalb_Chr07g0184261 Lupinus albus HOM05D000938 ORTHO05D001451 5.9e-15 84.7 122 46.7
Ca_17622_v3 Cicer arietinum L. HOM05D000938 ORTHO05D001451 1.3e-14 83.6 119 49.6
PGR119G0365 Punica granatum HOM05D000938 ORTHO05D001451 1.3e-14 83.6 126 46.0
Nn5g28429 Nelumbo nucifera HOM05D000938 ORTHO05D001451 1.7e-14 83.2 120 44.2
Dinv12778 Davidia involucrata HOM05D000938 ORTHO05D001451 2.2e-14 82.8 112 50.9
TWI75G1331 Tripterygium wilfordii HOM05D000938 ORTHO05D001451 5.0e-14 81.6 112 47.3
CSS0009834 Camellia sinensis var. sinensis HOM05D000938 ORTHO05D001451 6.5e-14 81.3 124 46.8
PGR119G1832 Punica granatum HOM05D000938 ORTHO05D001451 2.5e-13 79.3 146 41.1
Aqoxy6G00324 Aquilegia oxysepala HOM05D000938 ORTHO05D001451 7.2e-13 77.8 121 43.0
CiPaw.03G117700 Carya illinoinensis HOM05D000938 ORTHO05D001451 1.2e-12 77.0 121 40.5
CiPaw.04G079100 Carya illinoinensis HOM05D000938 ORTHO05D001451 1.2e-12 77.0 120 40.0
TWI75G1557 Tripterygium wilfordii HOM05D000938 ORTHO05D001451 1.2e-12 77.0 108 46.3
Rhsim10G0127000 Rhododendron simsii HOM05D000938 ORTHO05D001451 1.6e-12 76.6 118 42.4
Glyma.05G194350 Glycine max HOM05D000938 ORTHO05D001451 3.6e-12 75.5 125 44.8
PGR102G2206 Punica granatum HOM05D000938 ORTHO05D001451 3.6e-12 75.5 132 40.9
QL10p041154 Quercus lobata HOM05D000938 ORTHO05D001451 8.0e-12 74.3 123 42.3
PGSC0003DMG400019873 Solanum tuberosum HOM05D000938 ORTHO05D001451 8.0e-12 74.3 120 44.2
Phvul.002G274500 Phaseolus vulgaris HOM05D000938 ORTHO05D001451 1.0e-11 73.9 136 41.2
TAR625G1159 Trochodendron aralioides HOM05D000938 ORTHO05D001451 1.0e-11 73.9 124 39.5
Actinidia06582 Actinidia chinensis HOM05D000938 ORTHO05D001451 1.8e-11 73.2 123 44.7
Ciclev10000576m.g Citrus clementina HOM05D000938 ORTHO05D001451 2.3e-11 72.8 121 40.5
Manes.12G147100 Manihot esculenta HOM05D000938 ORTHO05D001451 3.0e-11 72.4 124 40.3
Solyc02g032850.3 Solanum lycopersicum HOM05D000938 ORTHO05D001451 3.0e-11 72.4 120 43.3
VMungo0251G2900 Vigna mungo HOM05D000938 ORTHO05D001451 4.0e-11 72.0 125 43.2
Sopen02g011180 Solanum pennellii HOM05D000938 ORTHO05D001451 5.2e-11 71.6 120 43.3
Duzib187G1406 Durio zibethinus HOM05D000938 ORTHO05D001451 6.8e-11 71.2 116 38.8
Oeu008233.1 Olea europaea HOM05D000938 ORTHO05D001451 6.8e-11 71.2 109 45.0
Medtr0095s0080 Medicago truncatula HOM05D000938 ORTHO05D001451 8.8e-11 70.9 123 41.5
Medtr8g494200 Medicago truncatula HOM05D000938 ORTHO05D001451 8.8e-11 70.9 117 42.7
Sc09g0002220 Simmondsia chinensis HOM05D000938 ORTHO05D001451 1.2e-10 70.5 127 40.2
HanXRQChr10g0309421 Helianthus annuus HOM05D000938 ORTHO05D001451 1.5e-10 70.1 132 38.6
Lj4g0000059 Lotus japonicus HOM05D000938 ORTHO05D001451 1.5e-10 70.1 117 42.7
Lsat_1_v5_gn_5_82100 Lactuca sativa HOM05D000938 ORTHO05D001451 2.0e-10 69.7 130 41.5
ECA234G2409 Erigeron canadensis HOM05D000938 ORTHO05D001451 2.6e-10 69.3 132 40.2
Gohir.A05G381500 Gossypium hirsutum HOM05D000938 ORTHO05D001451 5.7e-10 68.2 116 37.9
Sabra05G0056100 Salix brachista HOM05D000938 ORTHO05D001451 5.7e-10 68.2 120 40.0
Gorai.012G038100 Gossypium raimondii HOM05D000938 ORTHO05D001451 7.5e-10 67.8 116 37.9
Sabra05G0056000 Salix brachista HOM05D000938 ORTHO05D001451 7.5e-10 67.8 127 37.8
Sed0022724 Sechium edule HOM05D000938 ORTHO05D001451 7.5e-10 67.8 121 36.4
Atru.chr4.1003 Acer truncatum HOM05D000938 ORTHO05D001451 9.8e-10 67.4 120 36.7
Gohir.D04G033800 Gossypium hirsutum HOM05D000938 ORTHO05D001451 1.3e-09 67.0 135 35.6
COL.COLO4_12066 Corchorus olitorius HOM05D000938 ORTHO05D001451 1.7e-09 66.6 107 40.2
Glyma.08G002100 Glycine max HOM05D000938 ORTHO05D001451 1.7e-09 66.6 124 42.7
Potri.005G068700 Populus trichocarpa HOM05D000938 ORTHO05D001451 2.2e-09 66.2 120 35.8
Sabra07G0083200 Salix brachista HOM05D000938 ORTHO05D001451 2.2e-09 66.2 123 39.0
Thecc.01G138600 Theobroma cacao HOM05D000938 ORTHO05D001451 2.8e-09 65.9 116 37.1
Psat7g045480 Pisum sativum HOM05D000938 ORTHO05D001451 3.7e-09 65.5 104 43.3
Prupe.4G276500 Prunus persica HOM05D000938 ORTHO05D001451 3.7e-09 65.5 123 36.6
Nitab4.5_0006396g0010 Nicotiana tabacum HOM05D000938 ORTHO05D001451 6.3e-09 64.7 120 42.5
Peaxi162Scf00331g01128 Petunia axillaris HOM05D000938 ORTHO05D001451 6.3e-09 64.7 120 38.3
Phvul.009G154000 Phaseolus vulgaris HOM05D000938 ORTHO05D001451 8.3e-09 64.3 120 39.2
arahy.Tifrunner.gnm1.ann1.YKDH6D Arachis hypogaea HOM05D000938 ORTHO05D001451 1.1e-08 63.9 112 41.1
Duzib264G1224 Durio zibethinus HOM05D000938 ORTHO05D001451 1.1e-08 63.9 117 37.6
Potri.007G100600 Populus trichocarpa HOM05D000938 ORTHO05D001451 1.1e-08 63.9 123 38.2
CANSAT01G1052 Cannabis sativa HOM05D000938 ORTHO05D001451 1.4e-08 63.5 130 36.2
FAN26G2282 Fragaria x ananassa HOM05D000938 ORTHO05D001451 1.8e-08 63.2 135 37.8
arahy.Tifrunner.gnm1.ann1.NKX1H6 Arachis hypogaea HOM05D000938 ORTHO05D001451 2.4e-08 62.8 115 40.9
Thecc.01G138400 Theobroma cacao HOM05D000938 ORTHO05D001451 2.4e-08 62.8 111 39.6
FAN23G2201 Fragaria x ananassa HOM05D000938 ORTHO05D001451 5.4e-08 61.6 134 35.8
arahy.Tifrunner.gnm1.ann1.RJ9TTJ Arachis hypogaea HOM05D000938 ORTHO05D001451 7.0e-08 61.2 115 40.0
Lalb_Chr11g0068651 Lupinus albus HOM05D000938 ORTHO05D001451 7.0e-08 61.2 123 43.1
AUR62006871 Chenopodium quinoa HOM05D000938 ORTHO05D001451 9.1e-08 60.8 122 36.9
DCAR_019991 Daucus carota HOM05D000938 ORTHO05D001451 9.1e-08 60.8 120 36.7
Glyma.06G156300 Glycine max HOM05D000938 ORTHO05D001451 9.1e-08 60.8 122 40.2
Manes.12G159500 Manihot esculenta HOM05D000938 ORTHO05D001451 9.1e-08 60.8 114 37.7
RcHm_v2.0_Chr2g0122591 Rosa chinensis HOM05D000938 ORTHO05D001451 9.1e-08 60.8 120 37.5
FvH4_1g24940 Fragaria vesca HOM05D000938 ORTHO05D001451 1.2e-07 60.5 134 34.3
FAN19G2886 Fragaria x ananassa HOM05D000938 ORTHO05D001451 1.2e-07 60.5 134 34.3
Nn1g08978 Nelumbo nucifera HOM05D000938 ORTHO05D001451 1.2e-07 60.5 117 36.8
THA.LOC104804461 Tarenaya hassleriana HOM05D000938 ORTHO05D001451 1.2e-07 60.5 118 37.3
Cpa.g.sc37.13 Carica papaya HOM05D000938 ORTHO05D001451 1.6e-07 60.1 115 39.1
ClCG04G001930 Citrullus lanatus HOM05D000938 ORTHO05D001451 3.5e-07 58.9 122 33.6
MD15G1136300 Malus domestica HOM05D000938 ORTHO05D001451 3.5e-07 58.9 129 37.2
MBI03_g28477_MAGBIO Magnolia biondii HOM05D001090 ORTHO05D008663 1.0e-06 57.4 118 33.9
GSVIVG01022328001 Vitis vinifera HOM05D000938 ORTHO05D001451 1.0e-06 57.4 123 35.8
Glyma.04G209700 Glycine max HOM05D000938 ORTHO05D001451 1.3e-06 57.0 124 36.3
arahy.Tifrunner.gnm1.ann1.KTYQ03 Arachis hypogaea HOM05D000938 ORTHO05D001451 2.9e-06 55.8 112 37.5
EL10Ac4g09634 Beta vulgaris HOM05D000938 ORTHO05D001451 2.9e-06 55.8 118 34.7
MELO3C008938.2 Cucumis melo HOM05D000938 ORTHO05D001451 3.8e-06 55.5 120 35.8
Thhalv10011112m.g Eutrema salsugineum HOM05D000938 ORTHO05D001451 5.0e-06 55.1 110 34.5
AUR62000526 Chenopodium quinoa HOM05D000938 ORTHO05D001451 6.6e-06 54.7 111 37.8
VMungo1309G0230 Vigna mungo HOM05D000938 ORTHO05D001451 6.6e-06 54.7 112 34.8
Ah.06g191090 Amaranthus hybridus HOM05D000938 ORTHO05D001451 8.6e-06 54.3 111 36.0
CsaV3_4G030710 Cucumis sativus L. HOM05D000938 ORTHO05D001451 8.6e-06 54.3 120 35.0


User provided reference genes

Program Settings