Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 1.2e-132 476.5 245 100.0
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 7.1e-104 380.9 244 79.1
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.6e-71 273.5 225 60.9
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 2.3e-70 269.6 226 58.8
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 1.2e-69 267.3 233 60.5
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 6.3e-68 261.5 222 59.9
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 8.2e-68 261.2 222 60.4
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 1.1e-67 260.8 233 59.2
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 1.1e-67 260.8 233 59.2
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 2.4e-67 259.6 233 58.8
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 2.4e-67 259.6 220 59.1
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 3.1e-67 259.2 221 59.7
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 3.1e-67 259.2 220 61.4
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 7.0e-67 258.1 222 57.2
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 7.0e-67 258.1 222 56.3
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 9.1e-67 257.7 222 56.3
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 1.2e-66 257.3 220 59.1
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 1.2e-66 257.3 220 58.2
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 2.0e-66 256.5 222 61.3
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 2.9e-65 252.7 233 56.7
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 4.2e-64 248.8 222 56.3
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 5.5e-64 248.4 213 59.6
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 9.4e-64 247.7 221 57.5
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 1.2e-63 247.3 222 56.3
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 1.6e-63 246.9 221 55.7
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 8.0e-63 244.6 221 57.0
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 4.0e-62 242.3 222 56.3
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 6.8e-62 241.5 221 55.7
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 8.8e-62 241.1 222 55.9
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 8.8e-62 241.1 221 56.6
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.2e-61 240.7 222 55.9
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 1.5e-61 240.4 222 55.9
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 3.4e-61 239.2 222 57.7
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 5.7e-61 238.4 222 55.0
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 7.5e-61 238.0 218 54.1
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 2.2e-60 236.5 221 55.2
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 6.3e-60 235.0 228 54.4
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 2.4e-59 233.0 222 54.1
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 3.5e-58 229.2 232 53.9
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 5.9e-58 228.4 232 53.0
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 1.3e-57 227.3 231 53.2
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 2.9e-57 226.1 222 52.3
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 2.9e-57 226.1 221 52.9
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 1.1e-56 224.2 233 53.6
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 1.1e-56 224.2 223 54.7
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 1.1e-56 224.2 222 54.1
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 2.5e-56 223.0 226 49.1
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 2.5e-56 223.0 223 54.3
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 3.2e-56 222.6 220 56.4
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 9.5e-56 221.1 195 57.9
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 2.1e-55 219.9 220 55.9
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 4.7e-55 218.8 222 51.4
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 4.7e-55 218.8 228 53.9
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 6.1e-55 218.4 233 52.8
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 8.0e-55 218.0 222 53.2
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 1.0e-54 217.6 222 51.8
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 1.0e-54 217.6 228 54.8
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 3.0e-54 216.1 223 52.5
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 3.0e-54 216.1 232 48.7
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 5.2e-54 215.3 103 99.0
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 1.2e-53 214.2 220 50.9
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 1.5e-53 213.8 223 52.5
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 1.5e-53 213.8 223 52.5
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 1.5e-53 213.8 223 52.5
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 1.5e-53 213.8 220 53.2
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 2.0e-53 213.4 219 54.8
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 2.6e-53 213.0 219 53.4
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 4.4e-53 212.2 222 53.6
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 7.5e-53 211.5 221 51.1
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 9.8e-53 211.1 218 49.1
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.2e-52 209.9 235 50.6
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 8.3e-52 208.0 219 46.6
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 8.3e-52 208.0 241 47.3
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 1.4e-51 207.2 249 49.8
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 1.4e-51 207.2 212 51.4
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 1.4e-51 207.2 232 48.3
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 4.1e-51 205.7 222 49.1
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 7.0e-51 204.9 248 49.6
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 7.0e-51 204.9 235 51.1
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 8.6e-49 198.0 219 47.5
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 1.1e-48 197.6 220 46.4
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 1.5e-48 197.2 221 47.1
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 7.3e-48 194.9 230 47.0
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 1.8e-46 190.3 170 56.5
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 6.8e-46 188.3 231 44.6
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 2.0e-45 186.8 257 44.7
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 5.7e-45 185.3 233 47.6
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 1.1e-43 181.0 193 52.3
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.1e-43 181.0 221 49.3
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 1.1e-43 181.0 220 47.3
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 2.4e-43 179.9 212 47.6
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 1.7e-41 173.7 142 54.2
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 2.3e-41 173.3 287 41.8
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 5.0e-41 172.2 221 43.9
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 1.5e-40 170.6 165 53.3
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 1.5e-40 170.6 181 52.5
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 4.3e-40 169.1 305 38.0
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 7.3e-40 168.3 201 46.8
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 7.5e-37 158.3 214 42.5
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 3.2e-35 152.9 193 41.5
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 9.2e-35 151.4 204 45.1
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 9.2e-35 151.4 222 41.0
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 1.2e-34 151.0 179 50.3
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 8.6e-33 144.8 287 32.8
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 2.5e-32 143.3 222 39.6
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 8.1e-31 138.3 230 37.0
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 2.3e-30 136.7 283 34.6
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 4.4e-29 132.5 213 40.8
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 9.9e-29 131.3 73 76.7
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 1.3e-28 131.0 144 46.5
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 1.7e-28 130.6 74 74.3
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 8.3e-28 128.3 231 36.8
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 8.3e-28 128.3 218 36.2
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.5e-26 122.9 133 52.6
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 5.1e-25 119.0 130 53.8
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 8.1e-23 111.7 137 41.6
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 8.9e-22 108.2 250 33.2
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 1.9e-19 100.5 127 46.5
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 2.1e-18 97.1 195 35.9
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 6.6e-17 92.0 200 33.0
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.5e-16 90.9 73 65.8
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.9e-12 76.6 168 32.1
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 5.4e-11 72.4 106 46.2
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 1.5e-08 64.3 58 65.5
CAN.G34.12 Capsicum annuum HOM05D006082 ORTHO05D007616 4.8e-07 59.3 71 50.7


User provided reference genes

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