Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00244 Erythranthe guttata HOM05D010976 ORTHO05D000088 1.6e-100 369.4 181 100.0
Migut.H00491 Erythranthe guttata HOM05D010976 ORTHO05D000088 3.1e-88 328.6 195 85.1
MSTRG.23799 Avicennia marina HOM05D010976 ORTHO05D000088 6.0e-31 138.3 199 39.2
Migut.H00493 Erythranthe guttata HOM05D010976 ORTHO05D023793 9.5e-21 104.4 185 35.7
Migut.I00350 Erythranthe guttata HOM05D010976 ORTHO05D023793 1.1e-19 100.9 185 35.7
Migut.I00351 Erythranthe guttata HOM05D010976 ORTHO05D023793 1.1e-19 100.9 185 35.7
SGA_v2.0_scaffold15G07222 Striga asiatica HOM05D010976 ORTHO05D000088 7.5e-18 94.7 159 35.8
SGA_v2.0_scaffold55G19766 Striga asiatica HOM05D000823 ORTHO05D000088 3.5e-15 85.9 154 31.8
SalBow1G4396 Salvia bowleyana HOM05D010976 ORTHO05D000088 3.9e-14 82.4 179 31.8
Cc07_g05490 Coffea canephora HOM05D000823 ORTHO05D000088 8.6e-14 81.3 211 29.4
SGA_v2.0_scaffold15G07220 Striga asiatica HOM05D000806 ORTHO05D002324 1.1e-13 80.9 164 30.5
SGA_v2.0_scaffold15G07218 Striga asiatica HOM05D000395 ORTHO05D000088 7.3e-13 78.2 173 27.7
SalBow1G5187 Salvia bowleyana HOM05D005797 ORTHO05D000088 2.8e-12 76.3 212 28.8
Cc07_g05480 Coffea canephora HOM05D000823 ORTHO05D000088 6.2e-12 75.1 199 26.6
CSS0000969 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 1.4e-11 73.9 89 42.7
CSS0025372 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 1.4e-11 73.9 89 42.7
SalBow1G3945 Salvia bowleyana HOM05D010976 ORTHO05D000088 2.4e-11 73.2 154 32.5
SGA_v2.0_scaffold204G41626 Striga asiatica HOM05D000823 ORTHO05D000088 2.4e-11 73.2 163 27.0
SalBow1G0661 Salvia bowleyana HOM05D010976 ORTHO05D000088 5.2e-11 72.0 154 32.5
SalBow1G0423 Salvia bowleyana HOM05D007098 ORTHO05D008793 6.8e-11 71.6 183 26.2
Cc01_g06500 Coffea canephora HOM05D005797 ORTHO05D000088 4.4e-10 68.9 89 38.2
SalBow1G2043 Salvia bowleyana HOM05D010976 ORTHO05D000088 5.8e-10 68.6 154 34.4
Prupe.4G178400 Prunus persica HOM05D000823 ORTHO05D000088 9.9e-10 67.8 166 31.3
TWI31G0651 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 1.7e-09 67.0 83 39.8
EL10Ac9g21795 Beta vulgaris HOM05D000823 ORTHO05D000088 2.9e-09 66.2 82 42.7
SalBow1G1964 Salvia bowleyana HOM05D010976 ORTHO05D000088 6.4e-09 65.1 164 31.7
C03p19330 Brassica napus HOM05D006628 ORTHO05D000088 8.4e-09 64.7 99 31.3
FvH4_7g12210 Fragaria vesca HOM05D000888 ORTHO05D000740 1.9e-08 63.5 171 28.7
BcaC01g06061 Brassica carinata HOM05D006628 ORTHO05D000088 3.2e-08 62.8 99 31.3
RcHm_v2.0_Chr1g0319011 Rosa chinensis HOM05D000823 ORTHO05D000088 4.2e-08 62.4 76 46.1
SalBow1G4579 Salvia bowleyana HOM05D005797 ORTHO05D000088 4.2e-08 62.4 215 26.5
Sp5g09020 Schrenkiella parvula HOM05D006628 ORTHO05D000088 5.4e-08 62.0 99 31.3
RcHm_v2.0_Chr1g0356381 Rosa chinensis HOM05D000823 ORTHO05D000088 7.1e-08 61.6 75 46.7
Cfa004943 Carpinus fangiana HOM05D001372 ORTHO05D002010 9.3e-08 61.2 83 41.0
FvH4_7g01780 Fragaria vesca HOM05D000823 ORTHO05D000088 9.3e-08 61.2 163 31.3
FAN06G1437 Fragaria x ananassa HOM05D000823 ORTHO05D000088 9.3e-08 61.2 163 31.3
CANSAT01G1099 Cannabis sativa HOM05D000395 ORTHO05D000088 1.2e-07 60.8 82 35.4
BcaB01g00291 Brassica carinata HOM05D006628 ORTHO05D000088 1.6e-07 60.5 95 31.6
A07p21570 Brassica napus HOM05D006628 ORTHO05D000088 2.1e-07 60.1 79 36.7
BraA07t29840Z Brassica rapa HOM05D006628 ORTHO05D000088 2.1e-07 60.1 79 36.7
BcaB02g07792 Brassica carinata HOM05D006628 ORTHO05D000088 2.7e-07 59.7 98 29.6
BraA03t15405Z Brassica rapa HOM05D006628 ORTHO05D000088 2.7e-07 59.7 102 29.4
Thhalv10000999m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 2.7e-07 59.7 99 28.3
RcHm_v2.0_Chr6g0299611 Rosa chinensis HOM05D000823 ORTHO05D000088 3.5e-07 59.3 164 29.9
FAN03G0739 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.6e-07 58.9 87 39.1
Cpa.g.sc7.145 Carica papaya HOM05D000823 ORTHO05D000088 6.0e-07 58.5 87 37.9
Lalb_Chr22g0355291 Lupinus albus HOM05D000823 ORTHO05D000088 6.0e-07 58.5 75 38.7
arahy.Tifrunner.gnm1.ann1.NXSQ64 Arachis hypogaea HOM05D000823 ORTHO05D000088 7.8e-07 58.2 75 41.3
arahy.Tifrunner.gnm1.ann1.U5RNGH Arachis hypogaea HOM05D000823 ORTHO05D000088 7.8e-07 58.2 75 41.3
A03p62870 Brassica napus HOM05D006628 ORTHO05D000088 7.8e-07 58.2 97 30.9
BraA03t15364Z Brassica rapa HOM05D006628 ORTHO05D000088 7.8e-07 58.2 97 30.9
FAN10G3479 Fragaria x ananassa HOM05D000823 ORTHO05D000088 7.8e-07 58.2 86 39.5
BcaB08g36960 Brassica carinata HOM05D006628 ORTHO05D000088 1.0e-06 57.8 82 32.9
C06p21150 Brassica napus HOM05D006628 ORTHO05D000088 1.0e-06 57.8 79 36.7
BolC6t37302H Brassica oleracea HOM05D006628 ORTHO05D000088 1.0e-06 57.8 79 36.7
BolC7t46487H Brassica oleracea HOM05D006628 ORTHO05D000088 1.0e-06 57.8 100 30.0
CARHR289330 Cardamine hirsuta HOM05D006628 ORTHO05D000088 1.0e-06 57.8 96 33.3
SalBow6G5296 Salvia bowleyana HOM05D005797 ORTHO05D000088 1.0e-06 57.8 87 40.2
SalBow6G5938 Salvia bowleyana HOM05D005797 ORTHO05D000088 1.0e-06 57.8 87 40.2
Aa31LG10G8440 Aethionema arabicum HOM05D006628 ORTHO05D000088 1.3e-06 57.4 75 36.0
A09p46330 Brassica napus HOM05D006628 ORTHO05D000088 1.3e-06 57.4 94 30.9
BraA09t40098Z Brassica rapa HOM05D006628 ORTHO05D000088 1.3e-06 57.4 94 30.9
Cc07_g20980 Coffea canephora HOM05D000823 ORTHO05D000088 1.3e-06 57.4 92 37.0
FAN01G3102 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.3e-06 57.4 87 39.1
C07p60560 Brassica napus HOM05D006628 ORTHO05D000088 1.7e-06 57.0 100 30.0
FvH4_7g23440 Fragaria vesca HOM05D000823 ORTHO05D000088 1.7e-06 57.0 87 39.1
FAN03G1989 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.7e-06 57.0 76 43.4
TPR.G15748 Trifolium pratense HOM05D000823 ORTHO05D000088 1.7e-06 57.0 75 36.0
DCAR_029047 Daucus carota HOM05D000823 ORTHO05D000088 2.3e-06 56.6 86 34.9
FAN06G0999 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.3e-06 56.6 86 39.5
FAN06G1958 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.3e-06 56.6 86 39.5
Lalb_Chr24g0399131 Lupinus albus HOM05D000823 ORTHO05D000088 2.3e-06 56.6 75 37.3
Sc07g0007340 Simmondsia chinensis HOM05D000888 ORTHO05D000740 2.3e-06 56.6 166 28.3
CANSAT01G3151 Cannabis sativa HOM05D000395 ORTHO05D000088 3.0e-06 56.2 81 34.6
SalBow1G1117 Salvia bowleyana HOM05D010976 ORTHO05D000088 3.0e-06 56.2 181 26.5
Medtr1g021350 Medicago truncatula HOM05D000823 ORTHO05D000088 3.9e-06 55.8 75 36.0
TPR.G13675 Trifolium pratense HOM05D000823 ORTHO05D000088 3.9e-06 55.8 75 36.0
Medtr1g021330 Medicago truncatula HOM05D000823 ORTHO05D000088 5.1e-06 55.5 62 41.9
Medtr1g021440 Medicago truncatula HOM05D000823 ORTHO05D000088 5.1e-06 55.5 75 36.0
BcaNung06129 Brassica carinata HOM05D000765 ORTHO05D000613 6.6e-06 55.1 84 33.3
Medtr1g021360 Medicago truncatula HOM05D000823 ORTHO05D000088 6.6e-06 55.1 75 33.3
Peaxi162Scf00016g01343 Petunia axillaris HOM05D000823 ORTHO05D000088 6.6e-06 55.1 97 35.1
unitig_699.g19758 Utricularia gibba HOM05D005797 ORTHO05D006479 6.6e-06 55.1 82 34.1
ECA234G3336 Erigeron canadensis HOM05D000015 ORTHO05D000270 8.7e-06 54.7 135 26.7
Medtr1g021410 Medicago truncatula HOM05D000823 ORTHO05D000088 8.7e-06 54.7 75 36.0
SEGI_06639 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 8.7e-06 54.7 83 37.3
SEGI_41472 Sequoiadendron giganteum HOM05D000823 ORTHO05D006479 8.7e-06 54.7 83 37.3
THA.LOC104807272 Tarenaya hassleriana HOM05D006628 ORTHO05D000088 8.7e-06 54.7 96 30.2


User provided reference genes

Program Settings