Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00236 Erythranthe guttata HOM05D005034 ORTHO05D006234 1.4e-43 179.1 85 100.0
Migut.L00237 Erythranthe guttata HOM05D005034 ORTHO05D006234 7.3e-40 166.8 85 92.9
Migut.L00238 Erythranthe guttata HOM05D005034 ORTHO05D006234 2.2e-36 155.2 73 98.6
Lj2P1238T83 Lonicera japonica HOM05D005034 ORTHO05D006234 4.2e-35 151.0 82 82.9
HanXRQChr02g0059701 Helianthus annuus HOM05D005034 ORTHO05D006234 7.1e-35 150.2 81 81.5
HanXRQChr05g0152421 Helianthus annuus HOM05D005034 ORTHO05D006234 7.1e-35 150.2 81 81.5
HanXRQChr06g0182991 Helianthus annuus HOM05D005034 ORTHO05D006234 7.1e-35 150.2 81 81.5
HanXRQCPg0580361 Helianthus annuus HOM05D005034 ORTHO05D006234 7.1e-35 150.2 81 81.5
SalBow1G5942 Salvia bowleyana HOM05D005034 ORTHO05D006234 1.2e-34 149.4 77 88.3
DCAR_032535 Daucus carota HOM05D005034 ORTHO05D006234 2.1e-34 148.7 82 80.5
CAN.G1045.13 Capsicum annuum HOM05D005034 ORTHO05D006234 3.5e-34 147.9 77 85.7
CAN.G134.8 Capsicum annuum HOM05D005034 ORTHO05D006234 3.5e-34 147.9 77 85.7
CAN.G1431.1 Capsicum annuum HOM05D005034 ORTHO05D006234 3.5e-34 147.9 77 85.7
CAN.G1526.4 Capsicum annuum HOM05D005034 ORTHO05D006234 3.5e-34 147.9 77 85.7
CAN.G278.5 Capsicum annuum HOM05D005034 ORTHO05D006234 3.5e-34 147.9 77 85.7
CAN.G413.9 Capsicum annuum HOM05D005034 ORTHO05D006234 3.5e-34 147.9 77 85.7
CAN.G424.20 Capsicum annuum HOM05D005034 ORTHO05D006234 3.5e-34 147.9 77 85.7
CAN.G939.6 Capsicum annuum HOM05D005034 ORTHO05D006234 3.5e-34 147.9 77 85.7
PGR111G0056 Punica granatum HOM05D005034 ORTHO05D006234 6.0e-34 147.1 82 81.7
Medtr4g006130 Medicago truncatula HOM05D005034 ORTHO05D006234 2.3e-33 145.2 82 80.5
Sed0006489 Sechium edule HOM05D005034 ORTHO05D006234 2.3e-33 145.2 82 80.5
Sed0013321 Sechium edule HOM05D005034 ORTHO05D006234 2.3e-33 145.2 82 80.5
LjContig00318g0021446 Lotus japonicus HOM05D005034 ORTHO05D006234 3.0e-33 144.8 84 81.0
LjContig00319g0026028 Lotus japonicus HOM05D005034 ORTHO05D006234 3.0e-33 144.8 84 81.0
PGSC0003DMG400029012 Solanum tuberosum HOM05D005034 ORTHO05D006234 3.0e-33 144.8 77 83.1
RcHm_v2.0_Chr5g0017241 Rosa chinensis HOM05D005034 ORTHO05D006234 3.9e-33 144.4 82 81.7
Peaxi162Scf01164g00036 Petunia axillaris HOM05D005034 ORTHO05D006234 5.1e-33 144.1 77 83.1
Gohir.D03G077700 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.1e-32 142.9 81 81.5
Gohir.1Z049831 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.5e-32 142.5 81 80.2
Gohir.A02G134200 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.5e-32 142.5 81 80.2
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 1.5e-32 142.5 76 81.6
arahy.Tifrunner.gnm1.ann1.ZFUC3L Arachis hypogaea HOM05D005034 ORTHO05D006234 5.6e-32 140.6 81 80.2
C07p33420 Brassica napus HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
C09p40380 Brassica napus HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BolSC29t60503H Brassica oleracea HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BolSC29t60543H Brassica oleracea HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BolSC35t60695H Brassica oleracea HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BolSC35t60701H Brassica oleracea HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BolSC37t60790H Brassica oleracea HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BolSC46t60961H Brassica oleracea HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BolSC47t61067H Brassica oleracea HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BolSC49t61140H Brassica oleracea HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BraSC103t45426Z Brassica rapa HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BraSC138t45537Z Brassica rapa HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BraSC179t45777Z Brassica rapa HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BraSC25t45907Z Brassica rapa HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
BraSC59t46548Z Brassica rapa HOM05D005034 ORTHO05D006234 9.6e-32 139.8 84 76.2
Gohir.D01G134300 Gossypium hirsutum HOM05D005034 ORTHO05D006234 9.6e-32 139.8 81 76.5
ATCG01040 Arabidopsis thaliana HOM05D005034 ORTHO05D006234 1.3e-31 139.4 84 76.2
CSS0025903 Camellia sinensis var. sinensis HOM05D005034 ORTHO05D006234 1.3e-31 139.4 79 78.5
Gohir.A10G117233 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.3e-31 139.4 81 79.0
Nn064s42213 Nelumbo nucifera HOM05D005034 ORTHO05D006234 1.3e-31 139.4 82 79.3
Nn1g08156 Nelumbo nucifera HOM05D005034 ORTHO05D006234 1.3e-31 139.4 82 79.3
Nn212s45210 Nelumbo nucifera HOM05D005034 ORTHO05D006234 1.3e-31 139.4 82 79.3
PSO548G0041 Papaver somniferum HOM05D005034 ORTHO05D006234 1.6e-31 139.0 82 76.8
Eucgr.C03526 Eucalyptus grandis HOM05D005034 ORTHO05D006234 8.1e-31 136.7 82 78.0
HanXRQChr17g0557781 Helianthus annuus HOM05D005034 ORTHO05D006234 1.4e-30 136.0 82 75.6
Sed0020615 Sechium edule HOM05D005034 ORTHO05D006234 9.0e-30 133.3 79 75.9
Phvul.002G050101 Phaseolus vulgaris HOM05D005034 ORTHO05D006234 2.2e-28 128.6 85 70.6
Oeu010692.1 Olea europaea HOM05D005034 ORTHO05D006234 2.4e-27 125.2 60 91.7
Eucgr.J01554 Eucalyptus grandis HOM05D005034 ORTHO05D006234 5.5e-27 124.0 66 84.8
Lalb_Chr07g0191731 Lupinus albus HOM05D005034 ORTHO05D006234 3.5e-26 121.3 64 84.4
CARHR178430 Cardamine hirsuta HOM05D005034 ORTHO05D006234 6.0e-26 120.6 84 69.0
Gohir.D10G247550 Gossypium hirsutum HOM05D005034 ORTHO05D006234 7.9e-26 120.2 72 77.8
MBI10_g47592_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 1.3e-25 119.4 76 72.4
Nitab4.5_0001130g0150 Nicotiana tabacum HOM05D005034 ORTHO05D006234 1.8e-25 119.0 67 82.1
Gohir.D08G145250 Gossypium hirsutum HOM05D005034 ORTHO05D006234 6.7e-25 117.1 59 88.1
GSVIVG01004975001 Vitis vinifera HOM05D005034 ORTHO05D006234 8.7e-25 116.7 60 83.3
Ciclev10010882m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.1e-24 116.3 60 86.7
Ciclev10018423m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.1e-24 116.3 60 86.7
Ciclev10027633m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.1e-24 116.3 60 86.7
Ciclev10027652m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.1e-24 116.3 60 86.7
Ciclev10030457m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.1e-24 116.3 60 86.7
Gorai.011G286000 Gossypium raimondii HOM05D005034 ORTHO05D006234 1.1e-24 116.3 72 75.0
HanXRQChr09g0258531 Helianthus annuus HOM05D005034 ORTHO05D006234 5.6e-24 114.0 81 64.2
HanXRQChr11g0323731 Helianthus annuus HOM05D005034 ORTHO05D006234 5.6e-24 114.0 81 64.2
Solyc08g022180.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 7.4e-24 113.6 60 81.7
BolSC45t60912H Brassica oleracea HOM05D005034 ORTHO05D006234 1.3e-23 112.8 70 72.9
CAN.G8.23 Capsicum annuum HOM05D005034 ORTHO05D006234 4.0e-22 107.8 77 67.5
Gorai.009G333000 Gossypium raimondii HOM05D005034 ORTHO05D006234 4.0e-22 107.8 58 84.5
Gohir.D05G311850 Gossypium hirsutum HOM05D005034 ORTHO05D006234 2.0e-21 105.5 58 84.5
Pp3c2_30980 Physcomitrium patens HOM05D005034 ORTHO05D006234 3.4e-21 104.8 62 75.8
Lalb_Chr23g0274781 Lupinus albus HOM05D005034 ORTHO05D006234 1.9e-19 99.0 82 61.0
HanXRQChr00c0504g0575291 Helianthus annuus HOM05D005034 ORTHO05D006234 5.5e-19 97.4 57 77.2
Hma1.2p1_0201F.1_g086105 Hydrangea macrophylla HOM05D005034 ORTHO05D006234 9.3e-19 96.7 46 91.3
Hma1.2p1_0201F.1_g086120 Hydrangea macrophylla HOM05D005034 ORTHO05D006234 9.3e-19 96.7 46 91.3
Gohir.D03G074401 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.6e-18 95.9 51 80.4
MBI19_g35567_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 2.1e-18 95.5 50 82.0
Migut.D01256 Erythranthe guttata HOM05D005034 ORTHO05D006234 2.7e-18 95.1 48 87.5
Gorai.002G058800 Gossypium raimondii HOM05D005034 ORTHO05D006234 1.0e-17 93.2 51 78.4
HanXRQChr00c0495g0575141 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-17 93.2 73 60.3
MCO12G235 Micromonas commoda HOM05D005034 ORTHO05D006234 1.0e-17 93.2 61 62.3
PRCOL_00005002 Prasinoderma coloniale HOM05D005034 ORTHO05D006234 2.3e-17 92.0 61 63.9
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 3.3e-16 88.2 47 80.9
Medtr0002s0180 Medicago truncatula HOM05D005034 ORTHO05D006234 3.7e-15 84.7 48 77.1
HanXRQChr00c0690g0576751 Helianthus annuus HOM05D005034 ORTHO05D006234 1.4e-14 82.8 36 94.4
Prupe.5G061000 Prunus persica HOM05D005034 ORTHO05D006234 2.4e-14 82.0 37 89.2
Medtr4g006180 Medicago truncatula HOM05D005034 ORTHO05D006234 5.3e-14 80.9 55 65.5
Psat0s8829g0120 Pisum sativum HOM05D005034 ORTHO05D006234 9.0e-14 80.1 36 91.7
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 1.2e-13 79.7 45 77.8
HanXRQChr03g0073081 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-12 76.6 34 91.2
SMO086G0050 Selaginella moellendorffii HOM05D005034 ORTHO05D006234 1.7e-12 75.9 72 54.2
Gohir.D03G171050 Gossypium hirsutum HOM05D005034 ORTHO05D006234 4.2e-11 71.2 31 87.1
Solyc02g011730.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 5.5e-11 70.9 53 66.0
Lsat_1_v5_gn_5_11321 Lactuca sativa HOM05D005034 ORTHO05D006234 1.2e-10 69.7 36 80.6
Gorai.003G181700 Gossypium raimondii HOM05D005034 ORTHO05D006234 1.6e-10 69.3 31 83.9
HanXRQChr01g0020081 Helianthus annuus HOM05D005034 ORTHO05D006234 2.1e-10 68.9 29 93.1
CAN.G1045.14 Capsicum annuum HOM05D005034 ORTHO05D006234 1.8e-06 55.8 31 77.4
Psat5g168080 Pisum sativum HOM05D005034 ORTHO05D006234 9.1e-06 53.5 23 87.0


User provided reference genes

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