Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00117 Erythranthe guttata HOM05D005879 ORTHO05D007432 2.7e-45 184.9 89 100.0
Migut.L00135 Erythranthe guttata HOM05D005879 ORTHO05D007432 4.1e-41 171.0 88 92.0
Oeu032409.1 Olea europaea HOM05D005879 ORTHO05D007432 2.0e-35 152.1 88 78.4
SalBow7G4497 Salvia bowleyana HOM05D005879 ORTHO05D007432 2.2e-34 148.7 88 78.4
MSTRG.3773 Avicennia marina HOM05D005879 ORTHO05D007432 3.7e-34 147.9 87 80.5
SGA_v2.0_scaffold115G32189 Striga asiatica HOM05D005879 ORTHO05D007432 3.1e-33 144.8 88 78.4
SGA_v2.0_scaffold334G49051 Striga asiatica HOM05D005879 ORTHO05D007432 4.1e-33 144.4 88 78.4
unitig_32.g10701 Utricularia gibba HOM05D005879 ORTHO05D007432 5.9e-32 140.6 88 73.9
Nitab4.5_0009581g0010 Nicotiana tabacum HOM05D005879 ORTHO05D007432 5.0e-31 137.5 88 72.7
CAN.G151.26 Capsicum annuum HOM05D005879 ORTHO05D007432 6.5e-31 137.1 88 73.9
Solyc05g052840.1 Solanum lycopersicum HOM05D005879 ORTHO05D007432 8.5e-31 136.7 86 75.6
Sopen05g031350 Solanum pennellii HOM05D005879 ORTHO05D007432 8.5e-31 136.7 86 75.6
Haze_24910 Corylus avellana HOM05D005879 ORTHO05D007432 1.9e-30 135.6 86 73.3
Haze_24914 Corylus avellana HOM05D005879 ORTHO05D007432 1.9e-30 135.6 86 73.3
Cfa017077 Carpinus fangiana HOM05D005879 ORTHO05D007432 2.5e-30 135.2 86 73.3
PGSC0003DMG400027189 Solanum tuberosum HOM05D005879 ORTHO05D007432 2.5e-30 135.2 86 74.4
Peaxi162Scf00054g00186 Petunia axillaris HOM05D005879 ORTHO05D007432 5.5e-30 134.0 88 72.7
Sabra05G0061500 Salix brachista HOM05D005879 ORTHO05D007432 7.2e-30 133.7 86 72.1
Cc07_g15080 Coffea canephora HOM05D005879 ORTHO05D007432 9.4e-30 133.3 88 72.7
ClCG07G017360 Citrullus lanatus HOM05D005879 ORTHO05D007432 2.1e-29 132.1 86 72.1
QL06p049237 Quercus lobata HOM05D005879 ORTHO05D007432 2.1e-29 132.1 86 72.1
vmacro12962 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 2.1e-29 132.1 86 73.3
Potri.005G074700 Populus trichocarpa HOM05D005879 ORTHO05D007432 4.7e-29 131.0 88 69.3
Rhsim01G0133800 Rhododendron simsii HOM05D005879 ORTHO05D007432 4.7e-29 131.0 86 72.1
RhsimUnG0233600 Rhododendron simsii HOM05D005879 ORTHO05D007432 4.7e-29 131.0 86 72.1
Eucgr.B03900 Eucalyptus grandis HOM05D005879 ORTHO05D007432 8.0e-29 130.2 86 73.3
CiPaw.03G142700 Carya illinoinensis HOM05D005879 ORTHO05D007432 1.0e-28 129.8 86 69.8
DCAR_003483 Daucus carota HOM05D005879 ORTHO05D007432 1.0e-28 129.8 86 69.8
Manes.12G134100 Manihot esculenta HOM05D005879 ORTHO05D007432 1.0e-28 129.8 88 69.3
Gohir.D11G220800 Gossypium hirsutum HOM05D005879 ORTHO05D007432 2.3e-28 128.6 88 70.5
Gorai.007G237000 Gossypium raimondii HOM05D005879 ORTHO05D007432 2.3e-28 128.6 88 70.5
Duzib147G1529 Durio zibethinus HOM05D005879 ORTHO05D007432 3.0e-28 128.3 88 70.5
FAN23G0004 Fragaria x ananassa HOM05D005879 ORTHO05D007432 3.0e-28 128.3 86 70.9
Sed0022481 Sechium edule HOM05D005879 ORTHO05D007432 3.0e-28 128.3 86 70.9
MELO3C017607.2 Cucumis melo HOM05D005879 ORTHO05D007432 4.0e-28 127.9 86 70.9
Gohir.A11G202400 Gossypium hirsutum HOM05D005879 ORTHO05D007432 6.7e-28 127.1 88 69.3
RcHm_v2.0_Chr2g0113151 Rosa chinensis HOM05D005879 ORTHO05D007432 6.7e-28 127.1 86 69.8
vmacro17311 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 6.7e-28 127.1 85 72.9
THA.LOC104807688 Tarenaya hassleriana HOM05D005879 ORTHO05D007432 8.8e-28 126.7 88 68.2
Glyma.08G134800 Glycine max HOM05D005879 ORTHO05D007432 1.2e-27 126.3 86 72.1
Hma1.2p1_0308F.1_g120270 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 1.2e-27 126.3 86 72.1
Hma1.2p1_0308F.1_g120280 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 1.2e-27 126.3 86 72.1
Lj4g0026645 Lotus japonicus HOM05D005879 ORTHO05D007432 1.2e-27 126.3 86 70.9
FAN26G1261 Fragaria x ananassa HOM05D005879 ORTHO05D007432 1.5e-27 125.9 86 68.6
PSO339G2019 Papaver somniferum HOM05D005879 ORTHO05D007432 1.5e-27 125.9 86 67.4
PGR102G2441 Punica granatum HOM05D005879 ORTHO05D007432 1.5e-27 125.9 86 70.9
Sc05g0001510 Simmondsia chinensis HOM05D005879 ORTHO05D007432 2.0e-27 125.6 86 67.4
TWI77G0137 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 2.0e-27 125.6 86 68.6
TWI81G0999 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 2.0e-27 125.6 86 68.6
CsaV3_4G004590 Cucumis sativus L. HOM05D005879 ORTHO05D007432 2.6e-27 125.2 86 69.8
CsaV3_UNG120970 Cucumis sativus L. HOM05D005879 ORTHO05D007432 2.6e-27 125.2 86 69.8
CsaV3_UNG160200 Cucumis sativus L. HOM05D005879 ORTHO05D007432 2.6e-27 125.2 86 69.8
CsaV3_UNG223580 Cucumis sativus L. HOM05D005879 ORTHO05D007432 2.6e-27 125.2 86 69.8
Dinv21896 Davidia involucrata HOM05D005879 ORTHO05D007432 2.6e-27 125.2 86 69.8
FvH4_1g20700 Fragaria vesca HOM05D005879 ORTHO05D007432 3.3e-27 124.8 86 68.6
FAN19G0980 Fragaria x ananassa HOM05D005879 ORTHO05D007432 4.4e-27 124.4 86 67.4
Ah.11g050680 Amaranthus hybridus HOM05D005879 ORTHO05D007432 7.5e-27 123.6 86 67.4
Medtr8g090180 Medicago truncatula HOM05D005879 ORTHO05D007432 9.7e-27 123.2 86 68.6
VMungo0251G0721 Vigna mungo HOM05D005879 ORTHO05D007432 9.7e-27 123.2 86 69.8
Cpa.g.sc615.1 Carica papaya HOM05D005879 ORTHO05D007432 1.7e-26 122.5 86 68.6
Lalb_Chr06g0163471 Lupinus albus HOM05D005879 ORTHO05D007432 2.2e-26 122.1 86 69.8
Ciclev10020973m.g Citrus clementina HOM05D005879 ORTHO05D007432 2.8e-26 121.7 88 69.3
COL.COLO4_27255 Corchorus olitorius HOM05D005879 ORTHO05D007432 2.8e-26 121.7 88 67.0
PSO801G0022 Papaver somniferum HOM05D005879 ORTHO05D007432 2.8e-26 121.7 86 65.1
Phvul.002G256800 Phaseolus vulgaris HOM05D005879 ORTHO05D007432 2.8e-26 121.7 86 68.6
Thecc.01G100600 Theobroma cacao HOM05D005879 ORTHO05D007432 3.7e-26 121.3 88 67.0
TAR381G0927 Trochodendron aralioides HOM05D005879 ORTHO05D007432 3.7e-26 121.3 86 66.3
Prupe.6G188100 Prunus persica HOM05D005879 ORTHO05D007432 4.8e-26 120.9 86 67.4
AUR62008049 Chenopodium quinoa HOM05D005879 ORTHO05D007432 6.3e-26 120.6 86 65.1
MD05G1043000 Malus domestica HOM05D005879 ORTHO05D007432 6.3e-26 120.6 83 67.5
Zm00001eb243870 Zea mays HOM05D005879 ORTHO05D007432 8.3e-26 120.2 86 65.1
AUR62028624 Chenopodium quinoa HOM05D005879 ORTHO05D007432 1.4e-25 119.4 83 66.3
Carub.0007s0187 Capsella rubella HOM05D005879 ORTHO05D007432 1.8e-25 119.0 88 64.8
CARHR246770 Cardamine hirsuta HOM05D005879 ORTHO05D007432 1.8e-25 119.0 88 64.8
Ca_17743_v3 Cicer arietinum L. HOM05D005879 ORTHO05D007432 1.8e-25 119.0 86 62.8
EL10Ac5g10569 Beta vulgaris HOM05D005879 ORTHO05D007432 2.4e-25 118.6 86 64.0
CDE04G0616 Ceratophyllum demersum HOM05D005879 ORTHO05D007432 2.4e-25 118.6 86 64.0
PSO170G2230 Papaver somniferum HOM05D005879 ORTHO05D007432 3.1e-25 118.2 86 62.8
Atru.chr7.1487 Acer truncatum HOM05D005879 ORTHO05D007432 4.1e-25 117.9 88 64.8
arahy.Tifrunner.gnm1.ann1.Y76I0L Arachis hypogaea HOM05D005879 ORTHO05D007432 5.3e-25 117.5 86 67.4
arahy.Tifrunner.gnm1.ann1.F9QSZL Arachis hypogaea HOM05D005879 ORTHO05D007432 7.0e-25 117.1 86 66.3
Glyma.05G177800 Glycine max HOM05D005879 ORTHO05D007432 9.1e-25 116.7 85 68.2
Aqoxy3G00238 Aquilegia oxysepala HOM05D005879 ORTHO05D007432 1.2e-24 116.3 85 65.9
Os02g0557000 Oryza sativa ssp. japonica HOM05D005879 ORTHO05D007432 1.2e-24 116.3 86 66.3
Atru.chr11.1549 Acer truncatum HOM05D005879 ORTHO05D007432 1.6e-24 115.9 87 65.5
MBI05_g37046_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 2.0e-24 115.5 86 64.0
Sp7g35960 Schrenkiella parvula HOM05D005879 ORTHO05D007432 2.0e-24 115.5 85 64.7
AT4G39920 Arabidopsis thaliana HOM05D005879 ORTHO05D007432 2.7e-24 115.2 88 62.5
ATR0584G053 Amborella trichopoda HOM05D005879 ORTHO05D007432 5.9e-24 114.0 86 61.6
AL7G12180 Arabidopsis lyrata HOM05D005879 ORTHO05D007432 5.9e-24 114.0 88 62.5
HPP92_013925 Vanilla planifolia HOM05D005879 ORTHO05D007432 5.9e-24 114.0 86 60.5
Aa31LG6G15340 Aethionema arabicum HOM05D005879 ORTHO05D007432 1.0e-23 113.2 86 62.8
TPR.G6200 Trifolium pratense HOM05D005879 ORTHO05D007432 1.0e-23 113.2 110 53.6
Nn2g14007 Nelumbo nucifera HOM05D005879 ORTHO05D007432 1.7e-23 112.5 86 61.6
MD01G1031400 Malus domestica HOM05D005879 ORTHO05D007432 2.2e-23 112.1 83 63.9
C07p62780 Brassica napus HOM05D005879 ORTHO05D007432 2.9e-23 111.7 83 63.9
BolC7t46692H Brassica oleracea HOM05D005879 ORTHO05D007432 2.9e-23 111.7 83 63.9
BraA03t15633Z Brassica rapa HOM05D005879 ORTHO05D007432 2.9e-23 111.7 83 63.9
VMungo0540G1211 Vigna mungo HOM05D005879 ORTHO05D007432 3.8e-23 111.3 86 62.8
A03p65800 Brassica napus HOM05D005879 ORTHO05D007432 6.5e-23 110.5 83 62.7
HanXRQChr17g0554861 Helianthus annuus HOM05D005879 ORTHO05D007432 6.5e-23 110.5 88 58.0
ECA233G0618 Erigeron canadensis HOM05D005879 ORTHO05D007432 8.5e-23 110.2 88 55.7
Thhalv10025595m.g Eutrema salsugineum HOM05D005879 ORTHO05D007432 8.5e-23 110.2 85 63.5
Lsat_1_v5_gn_8_137181 Lactuca sativa HOM05D005879 ORTHO05D007432 4.2e-22 107.8 88 59.1
SMO143G0283 Selaginella moellendorffii HOM05D005879 ORTHO05D007432 4.2e-22 107.8 85 60.0
SEGI_25682 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 8.0e-21 103.6 85 57.6
Psat7g055120 Pisum sativum HOM05D005879 ORTHO05D007432 1.0e-20 103.2 64 71.9
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 1.4e-20 102.8 84 60.7
Mapoly0002s0046 Marchantia polymorpha HOM05D005879 ORTHO05D007432 5.2e-20 100.9 87 57.5
Actinidia28237 Actinidia chinensis HOM05D005879 ORTHO05D007432 5.7e-19 97.4 61 70.5
AagrBONN_evm.TU.Sc2ySwM_117.1918 Anthoceros agrestis HOM05D005879 ORTHO05D007432 8.3e-18 93.6 83 51.8
arahy.Tifrunner.gnm1.ann1.DH96WI Arachis hypogaea HOM05D005879 ORTHO05D007432 1.4e-17 92.8 86 55.8
Pp3c13_2250 Physcomitrium patens HOM05D005879 ORTHO05D007432 3.1e-17 91.7 87 55.2
Potri.007G093800 Populus trichocarpa HOM05D005879 ORTHO05D007432 2.7e-16 88.6 88 52.3
MCO11G662 Micromonas commoda HOM05D005879 ORTHO05D007432 6.1e-13 77.4 81 50.6
BcaB03g12293 Brassica carinata HOM05D005879 ORTHO05D007432 4.0e-12 74.7 71 56.3
Hma1.2p1_0297F.1_g117050 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 4.4e-11 71.2 59 61.0
PRCOL_00003435 Prasinoderma coloniale HOM05D005879 ORTHO05D007432 4.9e-10 67.8 63 49.2
PRCOL_00004923 Prasinoderma coloniale HOM05D005879 ORTHO05D034414 9.2e-09 63.5 80 36.2
Cre03.g200150 Chlamydomonas reinhardtii HOM05D005879 ORTHO05D007432 2.9e-07 58.5 90 37.8
MBI15_g14577_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 5.0e-07 57.8 52 51.9
BraA08t34278Z Brassica rapa HOM05D005879 ORTHO05D007432 1.5e-06 56.2 37 73.0


User provided reference genes

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