Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01509 Erythranthe guttata HOM05D005582 ORTHO05D007028 5.5e-286 986.9 478 100.0
Migut.N00012 Erythranthe guttata HOM05D005582 ORTHO05D007028 1.1e-246 856.3 530 84.0
MSTRG.19398 Avicennia marina HOM05D005582 ORTHO05D007028 1.4e-196 689.9 526 68.4
SGA_v2.0_scaffold227G43203 Striga asiatica HOM05D005582 ORTHO05D007028 2.5e-185 652.5 526 64.4
Oeu022697.1 Olea europaea HOM05D005582 ORTHO05D007028 5.2e-183 644.8 512 64.3
Dinv29525 Davidia involucrata HOM05D005582 ORTHO05D007028 1.7e-173 613.2 537 58.8
GSVIVG01017603001 Vitis vinifera HOM05D005582 ORTHO05D007028 1.3e-162 577.0 536 55.4
GSVIVG01017662001 Vitis vinifera HOM05D005582 ORTHO05D007028 2.3e-162 576.2 536 55.4
Potri.010G153300 Populus trichocarpa HOM05D005582 ORTHO05D007028 8.6e-162 574.3 537 55.7
Ciclev10004134m.g Citrus clementina HOM05D005582 ORTHO05D007028 1.4e-159 567.0 537 54.2
CSS0025323 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 3.1e-159 565.8 570 54.0
Actinidia01057 Actinidia chinensis HOM05D005582 ORTHO05D007028 6.8e-159 564.7 516 57.0
vmacro08001 Vaccinium macrocarpon HOM05D005582 ORTHO05D007028 6.8e-159 564.7 529 56.3
Cfa015717 Carpinus fangiana HOM05D005582 ORTHO05D007028 7.5e-158 561.2 537 54.4
Sabra10G0117900 Salix brachista HOM05D005582 ORTHO05D007028 1.3e-157 560.5 537 54.7
Peaxi162Scf01194g00137 Petunia axillaris HOM05D005582 ORTHO05D007028 2.2e-157 559.7 529 54.8
QL06p013845 Quercus lobata HOM05D005582 ORTHO05D007028 2.2e-157 559.7 536 54.3
QL93p1872_0012 Quercus lobata HOM05D005582 ORTHO05D007028 2.2e-157 559.7 536 54.3
Duzib151G1162 Durio zibethinus HOM05D005582 ORTHO05D007028 9.2e-156 554.3 536 53.2
Cc03_g00260 Coffea canephora HOM05D005582 ORTHO05D007028 4.6e-155 552.0 537 53.1
Rhsim04G0247200 Rhododendron simsii HOM05D005582 ORTHO05D007028 1.7e-154 550.1 518 55.2
Solyc12g099010.3 Solanum lycopersicum HOM05D005582 ORTHO05D007028 2.3e-154 549.7 532 54.7
Sopen12g033750 Solanum pennellii HOM05D005582 ORTHO05D007028 1.1e-153 547.4 532 54.5
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 9.5e-153 544.3 543 53.0
Atru.chr11.54 Acer truncatum HOM05D005582 ORTHO05D007028 6.2e-152 541.6 536 53.0
Manes.15G004000 Manihot esculenta HOM05D005582 ORTHO05D007028 8.1e-152 541.2 535 53.8
Prupe.1G108200 Prunus persica HOM05D005582 ORTHO05D007028 3.1e-151 539.3 526 54.9
HanXRQChr05g0148391 Helianthus annuus HOM05D005582 ORTHO05D007028 5.2e-151 538.5 534 53.6
Cpa.g.sc146.39 Carica papaya HOM05D005582 ORTHO05D007028 2.0e-150 536.6 534 52.8
Phvul.007G062300 Phaseolus vulgaris HOM05D005582 ORTHO05D007028 2.0e-150 536.6 538 51.3
Nitab4.5_0000895g0160 Nicotiana tabacum HOM05D005582 ORTHO05D007028 4.4e-150 535.4 521 54.5
Gohir.D09G066800 Gossypium hirsutum HOM05D005582 ORTHO05D007028 7.5e-150 534.6 536 52.2
TAR362G0979 Trochodendron aralioides HOM05D005582 ORTHO05D007028 1.3e-149 533.9 536 54.1
Gorai.006G081300 Gossypium raimondii HOM05D005582 ORTHO05D007028 1.7e-149 533.5 536 52.2
TWI53G0357 Tripterygium wilfordii HOM05D005582 ORTHO05D007028 1.7e-149 533.5 537 51.8
Gohir.A09G067200 Gossypium hirsutum HOM05D005582 ORTHO05D007028 2.2e-149 533.1 536 52.2
VMungo0720G3059 Vigna mungo HOM05D005582 ORTHO05D007028 3.7e-149 532.3 537 51.2
CiPaw.02G071000 Carya illinoinensis HOM05D005582 ORTHO05D007028 6.4e-149 531.6 537 52.3
Lj5g0009067 Lotus japonicus HOM05D005582 ORTHO05D007028 6.4e-149 531.6 546 51.3
Nitab4.5_0004665g0020 Nicotiana tabacum HOM05D005582 ORTHO05D007028 6.4e-149 531.6 521 54.1
Glyma.20G150800 Glycine max HOM05D005582 ORTHO05D007028 1.1e-148 530.8 538 51.1
Glyma.10G243400 Glycine max HOM05D005582 ORTHO05D007028 1.4e-148 530.4 538 50.9
Aqoxy5G02775 Aquilegia oxysepala HOM05D005582 ORTHO05D007028 6.0e-147 525.0 529 52.4
DCAR_023392 Daucus carota HOM05D005582 ORTHO05D007028 6.0e-147 525.0 559 52.2
Thecc.04G310500 Theobroma cacao HOM05D005582 ORTHO05D007028 6.6e-146 521.5 534 51.7
FAN12G2136 Fragaria x ananassa HOM05D005582 ORTHO05D007028 8.6e-146 521.2 526 53.4
FAN07G0038 Fragaria x ananassa HOM05D005582 ORTHO05D007028 1.1e-145 520.8 534 53.2
arahy.Tifrunner.gnm1.ann1.ZZ97E1 Arachis hypogaea HOM05D005582 ORTHO05D007028 1.9e-145 520.0 539 51.0
arahy.Tifrunner.gnm1.ann1.6ZCT8S Arachis hypogaea HOM05D005582 ORTHO05D007028 3.3e-145 519.2 539 50.8
Nn4g25411 Nelumbo nucifera HOM05D005582 ORTHO05D007028 1.6e-144 516.9 540 51.5
MD13G1143700 Malus domestica HOM05D005582 ORTHO05D007028 3.6e-144 515.8 526 52.9
Sc25g0001750 Simmondsia chinensis HOM05D005582 ORTHO05D007028 2.3e-143 513.1 537 50.8
Lalb_Chr06g0160761 Lupinus albus HOM05D005582 ORTHO05D007028 4.0e-143 512.3 537 49.7
Psat6g203520 Pisum sativum HOM05D005582 ORTHO05D007028 6.8e-143 511.5 538 50.7
CANSAT01G1159 Cannabis sativa HOM05D005582 ORTHO05D007028 9.9e-142 507.7 537 49.7
Lj3C839G18 Lonicera japonica HOM05D005582 ORTHO05D007028 9.9e-142 507.7 447 59.3
PSO170G3214 Papaver somniferum HOM05D005582 ORTHO05D007028 1.7e-141 506.9 535 50.5
Eucgr.B02209 Eucalyptus grandis HOM05D005582 ORTHO05D007028 3.7e-141 505.8 536 49.3
Ca_10846_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 4.9e-141 505.4 537 50.1
RcHm_v2.0_Chr4g0426871 Rosa chinensis HOM05D005582 ORTHO05D007028 4.9e-141 505.4 538 51.1
Medtr1g102710 Medicago truncatula HOM05D005582 ORTHO05D007028 9.2e-140 501.1 539 49.4
ECA246G0223 Erigeron canadensis HOM05D005582 ORTHO05D007028 1.3e-138 497.3 521 51.4
Duzib151G0781 Durio zibethinus HOM05D005582 ORTHO05D007028 3.9e-138 495.7 507 50.9
EL10Ac3g06266 Beta vulgaris HOM05D005582 ORTHO05D007028 8.6e-138 494.6 531 50.3
TPR.G26104 Trifolium pratense HOM05D005582 ORTHO05D007028 1.2e-136 490.7 531 49.9
PGR031G2985 Punica granatum HOM05D005582 ORTHO05D007028 5.2e-135 485.3 532 48.5
Sed0007110 Sechium edule HOM05D005582 ORTHO05D007028 8.9e-135 484.6 523 48.2
AUR62002565 Chenopodium quinoa HOM05D005582 ORTHO05D007028 2.0e-134 483.4 532 49.2
MELO3C021237.2 Cucumis melo HOM05D005582 ORTHO05D007028 3.2e-132 476.1 521 48.2
CsaV3_6G000150 Cucumis sativus L. HOM05D005582 ORTHO05D007028 4.2e-132 475.7 521 48.0
ClCG06G004260 Citrullus lanatus HOM05D005582 ORTHO05D007028 8.7e-130 468.0 531 47.3
FvH4_4g21250 Fragaria vesca HOM05D005582 ORTHO05D007028 1.1e-129 467.6 499 51.3
THA.LOC104818852 Tarenaya hassleriana HOM05D005582 ORTHO05D007028 1.1e-129 467.6 535 48.8
ATR0796G139 Amborella trichopoda HOM05D005582 ORTHO05D007028 3.5e-123 446.0 535 47.3
Hund12246 Selenicereus undatus HOM05D005582 ORTHO05D007028 6.6e-122 441.8 439 50.8
Thhalv10012423m.g Eutrema salsugineum HOM05D005582 ORTHO05D007028 2.5e-121 439.9 521 47.2
BcaB08g36669 Brassica carinata HOM05D005582 ORTHO05D007028 7.4e-121 438.3 529 46.7
AT5G18525 Arabidopsis thaliana HOM05D005582 ORTHO05D007028 2.1e-120 436.8 532 47.2
Ah.07g203770 Amaranthus hybridus HOM05D005582 ORTHO05D007028 4.0e-119 432.6 471 49.9
Sp6g25800 Schrenkiella parvula HOM05D005582 ORTHO05D007028 9.0e-119 431.4 527 47.2
BraA10t44167Z Brassica rapa HOM05D005582 ORTHO05D007028 1.5e-118 430.6 529 46.1
Zm00001eb131030 Zea mays HOM05D005582 ORTHO05D007028 2.0e-118 430.3 518 47.1
AUR62029987 Chenopodium quinoa HOM05D005582 ORTHO05D007028 3.4e-118 429.5 471 49.3
C09p57960 Brassica napus HOM05D005582 ORTHO05D007028 2.9e-117 426.4 527 46.1
BolC9t58663H Brassica oleracea HOM05D005582 ORTHO05D007028 2.9e-117 426.4 527 46.1
A10p21030 Brassica napus HOM05D005582 ORTHO05D007028 3.8e-117 426.0 529 45.7
HPP92_010030 Vanilla planifolia HOM05D005582 ORTHO05D007028 4.2e-116 422.5 522 45.0
Aa31LG11G11190 Aethionema arabicum HOM05D005582 ORTHO05D007028 6.0e-115 418.7 524 44.8
Carub.0006s1680 Capsella rubella HOM05D005582 ORTHO05D007028 1.8e-114 417.2 524 46.4
BcaB08g36665 Brassica carinata HOM05D005582 ORTHO05D007028 1.6e-107 394.0 435 49.2
Lsat_1_v5_gn_6_117861 Lactuca sativa HOM05D001037 ORTHO05D007028 5.1e-106 389.0 486 46.7
CSS0001073 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 1.4e-103 380.9 445 49.0
BcaC04g18671 Brassica carinata HOM05D005582 ORTHO05D007028 3.9e-90 336.3 445 43.4
AL6G29800 Arabidopsis lyrata HOM05D005582 ORTHO05D007028 2.0e-81 307.4 520 38.3
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 7.4e-81 305.4 396 43.9
DCAR_023431 Daucus carota HOM05D005582 ORTHO05D007028 1.7e-77 294.3 378 46.6
unitig_26.g10616 Utricularia gibba HOM05D005582 ORTHO05D007028 5.5e-76 289.3 293 53.9
SMO203G0276 Selaginella moellendorffii HOM05D005582 ORTHO05D007028 1.3e-72 278.1 524 34.4
Mapoly0075s0059 Marchantia polymorpha HOM05D005582 ORTHO05D007028 1.3e-69 268.1 537 33.9
MBI18_g09609_MAGBIO Magnolia biondii HOM05D005582 ORTHO05D007028 8.0e-67 258.8 309 47.9
AagrBONN_evm.TU.Sc2ySwM_344.3353 Anthoceros agrestis HOM05D005582 ORTHO05D007028 2.3e-50 204.1 517 29.2
CDE02G3337 Ceratophyllum demersum HOM05D005582 ORTHO05D007028 2.6e-49 200.7 213 49.3
SEGI_37408 Sequoiadendron giganteum HOM05D005582 ORTHO05D007028 1.1e-47 195.3 233 45.5
CDE02G0728 Ceratophyllum demersum HOM05D005582 ORTHO05D007028 6.6e-45 186.0 242 44.6
CBR_g49232 Chara braunii HOM05D005582 ORTHO05D007028 4.7e-27 126.7 289 29.4
SEGI_29964 Sequoiadendron giganteum HOM05D000557 ORTHO05D007028 7.6e-25 119.4 104 49.0
Migut.K00927 Erythranthe guttata HOM05D005582 ORTHO05D007028 1.6e-19 101.7 48 97.9
SEGI_01668 Sequoiadendron giganteum HOM05D005582 ORTHO05D007028 9.9e-17 92.4 128 41.4
SEGI_19987 Sequoiadendron giganteum HOM05D005582 ORTHO05D007028 3.2e-15 87.4 104 46.2
SEGI_30621 Sequoiadendron giganteum HOM05D005582 ORTHO05D007028 3.2e-15 87.4 104 46.2
Nitab4.5_0006377g0020 Nicotiana tabacum HOM05D002159 ORTHO05D005625 6.6e-13 79.7 79 53.2
HPP92_015254 Vanilla planifolia HOM05D005582 ORTHO05D007028 4.2e-07 60.5 91 40.7


User provided reference genes

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