Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 1.6e-143 512.7 257 100.0
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 2.7e-106 389.0 248 77.4
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 4.9e-103 378.3 257 74.3
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 2.4e-102 375.9 245 75.5
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 4.4e-96 355.1 245 72.7
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 1.8e-94 349.7 287 65.5
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 2.4e-94 349.4 251 69.7
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 3.5e-93 345.5 252 69.4
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 5.9e-93 344.7 251 68.1
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 1.7e-92 343.2 245 70.2
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 3.0e-92 342.4 238 73.1
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 3.9e-92 342.0 251 68.5
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 1.1e-91 340.5 251 68.9
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 2.5e-91 339.3 251 68.1
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 5.6e-91 338.2 247 67.6
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 1.2e-90 337.0 252 67.1
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 1.2e-90 337.0 247 69.6
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 1.2e-90 337.0 251 67.7
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 1.2e-90 337.0 241 70.1
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 1.6e-90 336.7 245 69.0
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 2.8e-90 335.9 242 69.8
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 6.2e-90 334.7 252 68.3
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 6.2e-90 334.7 252 66.7
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 8.0e-90 334.3 241 70.1
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.0e-89 334.0 247 67.6
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 4.0e-89 332.0 256 66.4
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 5.2e-89 331.6 248 68.1
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 8.9e-89 330.9 258 65.5
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 8.9e-89 330.9 256 64.5
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 1.2e-88 330.5 246 68.7
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 1.5e-88 330.1 252 65.5
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 4.4e-88 328.6 250 67.6
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 7.5e-88 327.8 243 68.7
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 1.3e-87 327.0 247 67.2
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 1.7e-87 326.6 250 68.8
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 1.7e-87 326.6 240 66.2
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 2.9e-87 325.9 251 66.5
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 3.7e-87 325.5 246 65.9
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 4.9e-87 325.1 255 64.7
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 4.9e-87 325.1 252 65.9
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 6.4e-87 324.7 246 67.5
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 1.4e-86 323.6 261 64.4
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 4.1e-86 322.0 240 69.6
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 5.4e-86 321.6 246 65.9
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 7.0e-86 321.2 248 66.5
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 7.0e-86 321.2 242 69.0
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 9.2e-86 320.9 243 67.5
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 2.7e-85 319.3 243 67.1
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 3.5e-85 318.9 254 65.7
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 4.6e-85 318.5 243 66.3
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 4.6e-85 318.5 274 59.9
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 7.8e-85 317.8 245 66.5
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 1.3e-84 317.0 252 65.1
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 6.6e-84 314.7 245 65.7
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 8.6e-84 314.3 241 67.2
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 1.5e-83 313.5 247 62.8
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 1.9e-83 313.2 233 68.2
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 1.9e-83 313.2 259 62.5
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 2.5e-83 312.8 259 62.5
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 3.3e-83 312.4 251 63.3
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 5.6e-83 311.6 250 62.4
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 9.5e-83 310.8 254 61.4
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 1.2e-82 310.5 248 62.9
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 1.6e-82 310.1 251 62.2
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 1.6e-82 310.1 256 60.9
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 1.6e-82 310.1 256 60.9
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 2.1e-82 309.7 257 62.3
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 2.1e-82 309.7 257 62.3
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 2.1e-82 309.7 261 59.0
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 2.8e-82 309.3 251 62.2
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 3.6e-82 308.9 256 62.1
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 1.1e-81 307.4 276 59.4
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 3.1e-81 305.8 261 58.6
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 1.5e-80 303.5 275 58.9
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 2.6e-80 302.8 254 61.0
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 3.4e-80 302.4 245 61.6
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 5.8e-80 301.6 245 61.6
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 5.8e-80 301.6 275 58.9
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 7.5e-80 301.2 276 58.7
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 9.8e-80 300.8 276 59.4
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 1.7e-79 300.1 243 65.4
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 6.4e-79 298.1 256 59.4
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 8.3e-79 297.7 274 60.2
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 1.6e-77 293.5 243 63.4
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 3.5e-77 292.4 270 59.3
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 1.0e-76 290.8 250 60.4
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 3.9e-76 288.9 262 57.6
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 1.5e-75 287.0 248 58.9
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 1.2e-74 283.9 247 56.7
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 1.1e-73 280.8 237 62.4
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 2.3e-73 279.6 219 63.9
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 5.8e-72 275.0 249 54.6
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 1.3e-71 273.9 285 50.9
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 3.8e-71 272.3 270 53.0
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 1.0e-68 264.2 251 55.0
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 1.1e-65 254.2 188 69.1
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 2.2e-63 246.5 245 57.6
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 5.6e-59 231.9 179 64.2
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 2.4e-54 216.5 286 42.0
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 4.6e-53 212.2 256 45.3
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 6.7e-52 208.4 219 49.3
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 4.6e-45 185.7 132 68.2
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 8.7e-44 181.4 266 47.4
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 3.3e-43 179.5 252 44.8
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 7.4e-43 178.3 127 67.7
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 1.4e-41 174.1 254 43.7
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 4.9e-39 165.6 172 47.1
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 3.8e-31 139.4 120 55.0
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 1.3e-28 131.0 125 56.0
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.8e-25 120.6 154 48.1
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 8.5e-23 111.7 136 40.4
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 2.8e-18 96.7 108 54.6
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 8.2e-18 95.1 111 47.7
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.5e-08 63.2 53 50.9
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 5.0e-07 59.3 38 76.3
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 6.5e-07 58.9 32 78.1
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 8.5e-07 58.5 133 36.1


User provided reference genes

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