Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 2.4e-66 255.4 132 100.0
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 1.7e-51 206.1 133 81.2
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 2.1e-49 199.1 129 78.3
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 2.1e-49 199.1 133 76.7
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 2.1e-49 199.1 133 78.9
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 4.6e-49 198.0 133 76.7
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 6.0e-49 197.6 127 78.7
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 7.9e-49 197.2 134 77.6
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 1.3e-48 196.4 133 75.9
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 2.3e-48 195.7 134 75.4
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 5.1e-48 194.5 129 79.8
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 8.7e-48 193.7 133 74.4
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 1.5e-47 193.0 134 75.4
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 1.9e-47 192.6 132 74.2
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 2.5e-47 192.2 127 77.2
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 1.3e-46 189.9 126 76.2
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 2.8e-46 188.7 127 75.6
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 2.8e-46 188.7 127 75.6
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 2.8e-46 188.7 127 75.6
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 2.8e-46 188.7 126 76.2
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 3.7e-46 188.3 134 74.6
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 3.7e-46 188.3 126 77.0
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 6.2e-46 187.6 134 76.9
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 1.1e-45 186.8 132 72.7
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 1.1e-45 186.8 116 81.0
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 1.4e-45 186.4 132 72.0
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 1.4e-45 186.4 132 72.7
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 3.1e-45 185.3 126 76.2
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 3.1e-45 185.3 127 78.0
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 3.1e-45 185.3 133 72.2
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 4.0e-45 184.9 128 78.9
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 4.0e-45 184.9 132 72.7
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 4.0e-45 184.9 134 75.4
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 5.3e-45 184.5 127 76.4
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 6.9e-45 184.1 134 70.9
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 9.0e-45 183.7 126 75.4
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 9.0e-45 183.7 134 76.1
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 9.0e-45 183.7 132 69.7
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 9.0e-45 183.7 132 69.7
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 1.2e-44 183.3 127 73.2
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 1.2e-44 183.3 134 77.6
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 1.5e-44 183.0 132 73.5
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 2.6e-44 182.2 134 71.6
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 3.4e-44 181.8 126 73.0
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 4.5e-44 181.4 134 70.9
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 4.5e-44 181.4 133 69.9
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 1.0e-43 180.3 134 72.4
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 1.3e-43 179.9 132 74.2
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 1.3e-43 179.9 127 74.8
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.3e-43 179.9 133 69.9
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 1.7e-43 179.5 128 71.1
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.2e-43 179.1 134 74.6
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 2.2e-43 179.1 123 71.5
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.9e-43 178.7 134 74.6
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 2.9e-43 178.7 129 73.6
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 3.8e-43 178.3 127 74.8
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 3.8e-43 178.3 128 72.7
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 3.8e-43 178.3 129 75.2
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 4.9e-43 177.9 132 72.7
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 4.9e-43 177.9 134 73.9
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 4.9e-43 177.9 132 73.5
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 6.5e-43 177.6 128 72.7
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 6.5e-43 177.6 119 73.9
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 8.4e-43 177.2 136 75.0
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 8.4e-43 177.2 136 72.8
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 8.4e-43 177.2 136 72.8
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 8.4e-43 177.2 136 75.0
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 1.1e-42 176.8 136 72.8
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.1e-42 176.8 136 72.8
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.1e-42 176.8 136 72.8
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.1e-42 176.8 136 72.8
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 1.1e-42 176.8 127 71.7
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.4e-42 176.4 134 69.4
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 1.4e-42 176.4 133 68.4
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.9e-42 176.0 129 74.4
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 1.9e-42 176.0 132 67.4
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.9e-42 176.0 105 85.7
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.5e-42 175.6 136 72.1
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 3.2e-42 175.3 132 68.2
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 3.2e-42 175.3 135 69.6
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 4.2e-42 174.9 132 70.5
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 4.2e-42 174.9 132 70.5
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 1.6e-41 172.9 127 69.3
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.6e-41 172.9 136 71.3
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 2.7e-41 172.2 113 77.0
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 4.6e-41 171.4 134 67.9
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 7.9e-41 170.6 118 73.7
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.9e-41 170.6 136 70.6
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 2.3e-40 169.1 133 66.2
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 6.7e-40 167.5 118 72.9
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 8.7e-40 167.2 108 77.8
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 1.1e-39 166.8 121 72.7
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 1.9e-39 166.0 130 68.5
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 2.5e-39 165.6 126 69.0
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 3.3e-39 165.2 126 69.8
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 7.4e-39 164.1 131 69.5
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 9.7e-39 163.7 128 69.5
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 2.2e-38 162.5 132 64.4
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 2.2e-38 162.5 119 71.4
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 3.7e-38 161.8 102 78.4
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 6.3e-38 161.0 127 66.9
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 8.2e-38 160.6 113 75.2
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 8.2e-38 160.6 113 75.2
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 8.2e-38 160.6 113 75.2
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 8.2e-38 160.6 113 75.2
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 8.2e-38 160.6 110 74.5
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 1.1e-37 160.2 133 66.2
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.8e-37 159.5 122 68.9
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.1e-37 158.7 127 69.3
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 4.1e-37 158.3 126 68.3
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 6.9e-37 157.5 133 62.4
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 6.9e-37 157.5 114 72.8
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 7.6e-36 154.1 136 65.4
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.3e-35 153.3 114 71.1
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 2.2e-35 152.5 128 66.4
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 4.2e-34 148.3 119 65.5
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 4.2e-34 148.3 115 68.7
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 4.2e-34 148.3 116 67.2
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 9.3e-34 147.1 114 68.4
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 1.6e-33 146.4 101 71.3
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 2.1e-33 146.0 132 59.1
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 3.6e-33 145.2 132 61.4
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.3e-31 138.7 124 62.9
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 1.7e-30 136.3 122 60.7
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 9.1e-29 130.6 93 69.9
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 6.5e-27 124.4 120 62.5
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.0e-24 115.5 93 71.0
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 1.8e-21 106.3 124 49.2
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.8e-21 106.3 57 86.0
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 4.1e-21 105.1 92 57.6
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 1.5e-20 103.2 104 53.8
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 7.2e-18 94.4 90 51.1
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 1.6e-17 93.2 105 47.6
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 4.4e-15 85.1 76 61.8
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 5.3e-13 78.2 93 51.6
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 8.5e-11 70.9 123 39.0
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 1.5e-10 70.1 99 40.4
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 5.5e-10 68.2 69 58.0
Actinidia36173 Actinidia chinensis HOM05D005499 ORTHO05D006666 1.6e-09 66.6 80 56.2
PRCOL_00001894 Prasinoderma coloniale HOM05D005499 ORTHO05D006666 8.2e-06 54.3 97 33.0


User provided reference genes

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