Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01416 Erythranthe guttata HOM05D007296 ORTHO05D009201 1.1e-71 273.1 132 100.0
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 1.2e-17 93.6 106 51.9
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 4.4e-15 85.1 105 50.5
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 5.7e-15 84.7 108 50.0
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 5.7e-15 84.7 95 50.5
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 3.1e-13 79.0 107 47.7
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 5.9e-12 74.7 112 44.6
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 1.0e-11 73.9 143 39.9
SGA_v2.0_scaffold135G34923 Striga asiatica HOM05D007296 ORTHO05D009201 1.7e-11 73.2 104 44.2
SalBow7G1031 Salvia bowleyana HOM05D007296 ORTHO05D009201 2.2e-11 72.8 102 43.1
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 2.9e-11 72.4 117 43.6
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 3.8e-11 72.0 102 43.1
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 6.5e-11 71.2 103 45.6
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 1.1e-10 70.5 124 41.1
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 1.1e-10 70.5 103 44.7
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 1.5e-10 70.1 105 41.9
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 1.9e-10 69.7 112 42.9
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 2.5e-10 69.3 115 45.2
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 2.5e-10 69.3 107 43.9
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 3.2e-10 68.9 121 42.1
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 5.5e-10 68.2 114 41.2
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 5.5e-10 68.2 125 38.4
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 1.2e-09 67.0 108 43.5
Sopen02g038130 Solanum pennellii HOM05D007296 ORTHO05D009201 1.2e-09 67.0 114 40.4
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 1.6e-09 66.6 107 43.0
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 1.6e-09 66.6 105 42.9
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 1.6e-09 66.6 123 43.1
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 1.6e-09 66.6 107 41.1
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 2.1e-09 66.2 98 44.9
Solyc02g093525.1 Solanum lycopersicum HOM05D007296 ORTHO05D009201 2.1e-09 66.2 114 39.5
Ah.12g055220 Amaranthus hybridus HOM05D007296 ORTHO05D009201 2.7e-09 65.9 117 37.6
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.7e-09 65.9 108 42.6
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 6.1e-09 64.7 113 40.7
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 6.1e-09 64.7 113 40.7
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 6.1e-09 64.7 110 39.1
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 8.0e-09 64.3 135 37.0
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 1.0e-08 63.9 106 41.5
Glyma.19G051600 Glycine max HOM05D007296 ORTHO05D009201 1.4e-08 63.5 104 45.2
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 1.4e-08 63.5 95 40.0
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 1.4e-08 63.5 104 38.5
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.8e-08 63.2 108 41.7
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 1.8e-08 63.2 107 39.3
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 2.3e-08 62.8 113 43.4
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 4.0e-08 62.0 114 35.1
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 4.0e-08 62.0 114 40.4
Glyma.05G115500 Glycine max HOM05D007296 ORTHO05D009201 5.2e-08 61.6 104 44.2
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 5.2e-08 61.6 98 40.8
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 5.2e-08 61.6 109 40.4
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 5.2e-08 61.6 98 38.8
C09p62750 Brassica napus HOM05D007296 ORTHO05D009201 6.7e-08 61.2 114 39.5
A10p24110 Brassica napus HOM05D007296 ORTHO05D009201 8.8e-08 60.8 125 39.2
BolC9t59112H Brassica oleracea HOM05D007296 ORTHO05D009201 8.8e-08 60.8 114 39.5
BraA10t44476Z Brassica rapa HOM05D007296 ORTHO05D009201 8.8e-08 60.8 125 39.2
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 1.5e-07 60.1 98 35.7
DCAR_015066 Daucus carota HOM05D007296 ORTHO05D009201 2.0e-07 59.7 103 39.8
ECA246G1504 Erigeron canadensis HOM05D007296 ORTHO05D009201 2.0e-07 59.7 99 39.4
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 2.6e-07 59.3 128 33.6
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 2.6e-07 59.3 106 35.8
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 3.3e-07 58.9 131 32.8
THA.LOC104821171 Tarenaya hassleriana HOM05D007296 ORTHO05D009201 4.4e-07 58.5 112 42.0
CARHR198900 Cardamine hirsuta HOM05D007296 ORTHO05D009201 5.7e-07 58.2 125 39.2
Aa31LG11G15190 Aethionema arabicum HOM05D007296 ORTHO05D009201 7.5e-07 57.8 61 54.1
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 7.5e-07 57.8 133 33.1
Thhalv10014918m.g Eutrema salsugineum HOM05D007296 ORTHO05D009201 7.5e-07 57.8 75 49.3
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 7.5e-07 57.8 103 39.8
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 9.7e-07 57.4 122 34.4
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 1.3e-06 57.0 111 39.6
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 1.7e-06 56.6 108 37.0
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 1.7e-06 56.6 97 39.2
AL6G25130 Arabidopsis lyrata HOM05D007296 ORTHO05D009201 2.2e-06 56.2 127 38.6
Ciclev10022926m.g Citrus clementina HOM05D007296 ORTHO05D009201 2.2e-06 56.2 110 34.5
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 2.2e-06 56.2 107 38.3
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 3.7e-06 55.5 102 34.3
Carub.0006s1259 Capsella rubella HOM05D007296 ORTHO05D009201 4.8e-06 55.1 103 42.7
Sp6g29610 Schrenkiella parvula HOM05D007296 ORTHO05D009201 4.8e-06 55.1 103 43.7
AT5G14410 Arabidopsis thaliana HOM05D007296 ORTHO05D009201 6.3e-06 54.7 104 42.3
Gorai.006G035000 Gossypium raimondii HOM05D007296 ORTHO05D009201 8.2e-06 54.3 108 38.9


User provided reference genes

Program Settings