Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 2.0e-90 335.9 188 100.0
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 6.3e-60 234.6 182 66.5
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 2.3e-57 226.1 182 64.8
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 1.1e-51 207.2 183 61.2
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 1.5e-45 186.8 192 64.1
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 3.5e-42 175.6 182 53.3
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 3.3e-40 169.1 183 53.0
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 8.1e-39 164.5 186 54.8
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 1.0e-33 147.5 180 47.8
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.2e-31 140.6 183 47.5
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.2e-31 140.6 176 48.9
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 1.2e-31 140.6 176 48.3
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 8.1e-31 137.9 191 46.6
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 1.1e-30 137.5 189 45.5
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 1.4e-30 137.1 190 43.7
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 1.4e-30 137.1 178 47.8
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 1.8e-30 136.7 181 44.8
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 1.8e-30 136.7 181 44.8
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 5.2e-30 135.2 179 46.9
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 6.8e-30 134.8 184 46.7
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 6.8e-30 134.8 190 43.2
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.2e-29 134.0 197 44.2
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 1.2e-29 134.0 178 44.9
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 1.2e-29 134.0 181 43.6
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 1.5e-29 133.7 173 54.3
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 1.5e-29 133.7 178 46.1
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.5e-29 133.7 188 44.7
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 2.6e-29 132.9 177 46.3
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 5.8e-29 131.7 201 42.3
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 2.9e-28 129.4 192 50.0
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 3.8e-28 129.0 185 44.3
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 3.8e-28 129.0 185 44.3
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 3.8e-28 129.0 194 51.0
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 4.9e-28 128.6 173 45.1
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 6.4e-28 128.3 175 46.3
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 8.4e-28 127.9 178 43.3
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 8.4e-28 127.9 181 43.1
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 1.1e-27 127.5 178 44.4
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 1.4e-27 127.1 184 44.0
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.9e-27 126.7 183 43.7
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 2.4e-27 126.3 185 42.2
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 3.2e-27 125.9 173 47.4
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 4.1e-27 125.6 182 43.4
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 7.1e-27 124.8 170 48.8
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 7.1e-27 124.8 173 45.7
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 9.2e-27 124.4 188 42.0
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 1.2e-26 124.0 189 40.2
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 3.5e-26 122.5 192 40.6
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 6.0e-26 121.7 176 46.6
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 7.8e-26 121.3 178 47.8
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.3e-25 120.6 179 43.0
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 1.3e-25 120.6 182 42.3
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 1.7e-25 120.2 185 41.1
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 2.3e-25 119.8 181 40.3
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 2.3e-25 119.8 177 41.8
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 3.0e-25 119.4 183 47.0
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 3.9e-25 119.0 190 40.5
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 5.1e-25 118.6 176 42.6
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 8.6e-25 117.9 182 42.9
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 8.6e-25 117.9 182 42.9
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 1.5e-24 117.1 176 44.9
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 1.5e-24 117.1 179 41.3
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.9e-24 116.7 190 47.9
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 1.9e-24 116.7 175 49.1
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 2.5e-24 116.3 182 41.8
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 4.3e-24 115.5 176 43.8
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 4.3e-24 115.5 177 41.8
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 5.6e-24 115.2 176 40.3
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 5.6e-24 115.2 170 52.9
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 5.6e-24 115.2 187 39.6
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 9.6e-24 114.4 181 38.7
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 1.6e-23 113.6 179 41.3
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 1.6e-23 113.6 176 43.8
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 1.6e-23 113.6 196 40.8
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 1.6e-23 113.6 198 46.0
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 2.1e-23 113.2 176 40.3
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 2.1e-23 113.2 192 46.4
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 2.8e-23 112.8 176 40.3
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.6e-23 112.5 190 45.8
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 4.7e-23 112.1 180 41.7
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 4.7e-23 112.1 192 46.4
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 8.1e-23 111.3 192 45.8
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 8.1e-23 111.3 178 43.8
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 8.1e-23 111.3 183 39.3
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 1.1e-22 110.9 178 38.2
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 1.1e-22 110.9 192 37.5
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 3.1e-22 109.4 172 41.9
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 4.0e-22 109.0 173 42.2
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 2.0e-21 106.7 174 41.4
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 2.0e-21 106.7 174 41.4
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 2.0e-21 106.7 175 41.1
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 2.0e-21 106.7 176 47.2
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 2.6e-21 106.3 176 48.3
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 2.6e-21 106.3 185 45.9
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 9.9e-21 104.4 182 42.3
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 9.9e-21 104.4 176 44.3
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 9.9e-21 104.4 205 42.0
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 1.3e-20 104.0 185 44.9
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 6.4e-20 101.7 177 45.8
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 6.4e-20 101.7 181 45.3
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 6.4e-20 101.7 180 45.0
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 6.4e-20 101.7 180 45.0
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.4e-19 100.5 182 46.2
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 2.4e-19 99.8 181 39.2
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 4.2e-19 99.0 185 45.4
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.3e-17 94.0 174 37.9
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.7e-17 93.6 173 33.5
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 2.3e-17 93.2 169 34.9
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 3.0e-17 92.8 181 39.8
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 5.1e-17 92.0 182 37.9
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 3.3e-16 89.4 207 36.7
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 5.6e-16 88.6 160 33.8
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 7.3e-16 88.2 177 34.5
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 7.3e-16 88.2 180 34.4
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 9.6e-16 87.8 132 43.9
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 2.8e-15 86.3 164 34.1
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 2.8e-15 86.3 210 33.8
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 1.4e-14 84.0 175 36.0
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 3.1e-14 82.8 168 31.5
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 3.1e-14 82.8 177 43.5
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 3.8e-12 75.9 68 51.5
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 8.4e-12 74.7 134 47.0
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 8.4e-12 74.7 126 44.4
Oeu018990.1 Olea europaea HOM05D005478 ORTHO05D006426 2.7e-10 69.7 89 52.8
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 3.0e-09 66.2 181 35.9
Nitab4.5_0005593g0050 Nicotiana tabacum HOM05D005478 ORTHO05D006426 1.5e-08 63.9 152 30.9
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 2.5e-08 63.2 54 66.7
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 3.3e-08 62.8 138 37.7
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 9.6e-08 61.2 108 36.1
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.6e-07 60.5 52 51.9
Zm00001eb183740 Zea mays HOM05D044595 ORTHO05D006426 2.8e-07 59.7 173 28.9
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 3.7e-07 59.3 54 50.0


User provided reference genes

Program Settings