Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01404 Erythranthe guttata HOM05D005844 ORTHO05D007203 7.5e-150 533.9 279 100.0
MSTRG.3288 Avicennia marina HOM05D005844 ORTHO05D007203 3.4e-118 428.7 278 76.3
SalBow7G1242 Salvia bowleyana HOM05D005844 ORTHO05D007203 1.7e-114 416.4 232 85.8
unitig_46.g18705 Utricularia gibba HOM05D005844 ORTHO05D007203 6.9e-111 404.4 280 73.9
Ciclev10016139m.g Citrus clementina HOM05D005844 ORTHO05D007203 3.9e-106 388.7 227 81.5
PGSC0003DMG400012605 Solanum tuberosum HOM05D005844 ORTHO05D007203 7.4e-105 384.4 279 69.2
Nitab4.5_0003318g0030 Nicotiana tabacum HOM05D005844 ORTHO05D007203 2.8e-104 382.5 277 69.0
Sopen02g037980 Solanum pennellii HOM05D005844 ORTHO05D007203 3.6e-104 382.1 279 68.1
Actinidia05987 Actinidia chinensis HOM05D005844 ORTHO05D007203 6.2e-104 381.3 235 77.4
Potri.001G344000 Populus trichocarpa HOM05D005844 ORTHO05D007203 6.2e-104 381.3 231 78.8
Actinidia36121 Actinidia chinensis HOM05D005844 ORTHO05D007203 2.4e-103 379.4 235 76.6
Nn4g22606 Nelumbo nucifera HOM05D005844 ORTHO05D007203 3.1e-103 379.0 231 76.6
RcHm_v2.0_Chr2g0173161 Rosa chinensis HOM05D005844 ORTHO05D007203 3.1e-103 379.0 229 77.7
Dinv09631 Davidia involucrata HOM05D005844 ORTHO05D007203 3.4e-102 375.6 234 76.9
Solyc02g093390.4 Solanum lycopersicum HOM05D005844 ORTHO05D007203 3.4e-102 375.6 233 76.8
Dinv33434 Davidia involucrata HOM05D005844 ORTHO05D007203 7.6e-102 374.4 234 76.9
Aqoxy5G03753 Aquilegia oxysepala HOM05D005844 ORTHO05D007203 1.3e-101 373.6 232 76.3
FAN05G4937 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.3e-101 373.6 287 65.2
SGA_v2.0_scaffold18G08274 Striga asiatica HOM05D005844 ORTHO05D007203 3.8e-101 372.1 229 76.9
CSS0012729 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 8.4e-101 370.9 227 77.1
FAN14G2428 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.1e-100 370.5 281 67.3
MD17G1023500 Malus domestica HOM05D005844 ORTHO05D007203 1.4e-100 370.2 295 62.7
Hma1.2p1_2550F.1_g324230 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 3.2e-100 369.0 280 68.2
Duzib187G1685 Durio zibethinus HOM05D005844 ORTHO05D007203 9.3e-100 367.5 228 76.3
ECA247G4055 Erigeron canadensis HOM05D005844 ORTHO05D007203 9.3e-100 367.5 280 64.6
Cfa007347 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.2e-99 367.1 232 75.9
Cpa.g.c26638.3 Carica papaya HOM05D005844 ORTHO05D007203 2.1e-99 366.3 226 77.4
CiPaw.03G045000 Carya illinoinensis HOM05D005844 ORTHO05D007203 3.5e-99 365.5 289 65.1
PGR142G0612 Punica granatum HOM05D005844 ORTHO05D007203 3.5e-99 365.5 234 74.8
HanXRQChr02g0043121 Helianthus annuus HOM05D005844 ORTHO05D007203 4.6e-99 365.2 233 75.1
Gohir.A05G355200 Gossypium hirsutum HOM05D005844 ORTHO05D007203 6.0e-99 364.8 286 66.4
Gohir.D04G058000 Gossypium hirsutum HOM05D005844 ORTHO05D007203 7.9e-99 364.4 286 66.4
Thecc.04G018700 Theobroma cacao HOM05D005844 ORTHO05D007203 7.9e-99 364.4 287 65.2
Gorai.012G064700 Gossypium raimondii HOM05D005844 ORTHO05D007203 1.0e-98 364.0 284 66.5
DCAR_021727 Daucus carota HOM05D005844 ORTHO05D007203 1.8e-98 363.2 220 79.1
FvH4_6g51630 Fragaria vesca HOM05D005844 ORTHO05D007203 2.3e-98 362.8 281 65.8
QL02p074142 Quercus lobata HOM05D005844 ORTHO05D007203 3.0e-98 362.5 280 64.3
Rhsim10G0015300 Rhododendron simsii HOM05D005844 ORTHO05D007203 3.0e-98 362.5 228 75.4
Rhsim10G0016000 Rhododendron simsii HOM05D005844 ORTHO05D007203 3.0e-98 362.5 228 75.4
TWI56G0011 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 3.0e-98 362.5 283 65.0
FAN09G1449 Fragaria x ananassa HOM05D005844 ORTHO05D007203 5.1e-98 361.7 281 65.5
Sc16g0003190 Simmondsia chinensis HOM05D005844 ORTHO05D007203 5.1e-98 361.7 219 78.1
GSVIVG01032391001 Vitis vinifera HOM05D005844 ORTHO05D007203 8.7e-98 360.9 221 77.8
THA.LOC104805364 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 1.1e-97 360.5 234 73.1
Prupe.3G293000 Prunus persica HOM05D005844 ORTHO05D007203 1.9e-97 359.8 229 74.7
vmacro05871 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 1.9e-97 359.8 238 73.5
FAN02G1237 Fragaria x ananassa HOM05D005844 ORTHO05D007203 7.4e-97 357.8 281 64.8
Phvul.004G044500 Phaseolus vulgaris HOM05D005844 ORTHO05D007203 7.4e-97 357.8 274 64.6
THA.LOC104823955 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 9.6e-97 357.5 285 63.5
Nitab4.5_0001860g0130 Nicotiana tabacum HOM05D005844 ORTHO05D007203 1.3e-96 357.1 273 66.3
Cc07_g01570 Coffea canephora HOM05D005844 ORTHO05D007203 2.1e-96 356.3 238 71.8
Sabra16G0223300 Salix brachista HOM05D005844 ORTHO05D007203 2.8e-96 355.9 247 71.7
ClCG09G019300 Citrullus lanatus HOM05D005844 ORTHO05D007203 4.8e-96 355.1 286 62.9
TWI36G0829 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 6.2e-96 354.8 228 73.7
Eucgr.I01735 Eucalyptus grandis HOM05D005844 ORTHO05D007203 8.1e-96 354.4 279 65.6
Lj1g0026070 Lotus japonicus HOM05D005844 ORTHO05D007203 2.4e-95 352.8 234 73.1
CANSAT64G0956 Cannabis sativa HOM05D005844 ORTHO05D007203 5.3e-95 351.7 289 64.0
Manes.15G150500 Manihot esculenta HOM05D005844 ORTHO05D007203 9.0e-95 350.9 275 65.5
CsaV3_5G027090 Cucumis sativus L. HOM05D005844 ORTHO05D007203 1.2e-94 350.5 287 62.0
Lalb_Chr08g0243241 Lupinus albus HOM05D005844 ORTHO05D007203 1.2e-94 350.5 284 63.0
ATR0824G194 Amborella trichopoda HOM05D005844 ORTHO05D007203 1.5e-94 350.1 228 71.9
VMungo0464G1123 Vigna mungo HOM05D005844 ORTHO05D007203 1.5e-94 350.1 230 71.3
Dinv07356 Davidia involucrata HOM05D005844 ORTHO05D007203 2.6e-94 349.4 250 68.8
Medtr2g062880 Medicago truncatula HOM05D005844 ORTHO05D007203 1.0e-93 347.4 227 72.2
Aa31LG9G1090 Aethionema arabicum HOM05D005844 ORTHO05D007203 1.3e-93 347.1 228 72.8
COL.COLO4_29165 Corchorus olitorius HOM05D005844 ORTHO05D007203 1.3e-93 347.1 221 74.2
PSO407G0181 Papaver somniferum HOM05D005844 ORTHO05D007203 3.8e-93 345.5 236 69.1
Sp7g01340 Schrenkiella parvula HOM05D005844 ORTHO05D007203 6.5e-93 344.7 285 61.1
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 1.1e-92 344.0 221 72.9
BcaB06g27527 Brassica carinata HOM05D005844 ORTHO05D007203 1.1e-92 344.0 227 71.8
AL7G49290 Arabidopsis lyrata HOM05D005844 ORTHO05D007203 1.9e-92 343.2 228 72.4
AT5G40530 Arabidopsis thaliana HOM05D005844 ORTHO05D007203 1.9e-92 343.2 227 72.7
Carub.0007s3499 Capsella rubella HOM05D005844 ORTHO05D007203 2.5e-92 342.8 241 69.7
Medtr7g033530 Medicago truncatula HOM05D005844 ORTHO05D007203 4.2e-92 342.0 226 71.7
Os02g0593900 Oryza sativa ssp. japonica HOM05D005844 ORTHO05D007203 7.1e-92 341.3 232 70.7
BcaB02g07945 Brassica carinata HOM05D005844 ORTHO05D007203 9.3e-92 340.9 283 61.8
Zm00001eb205620 Zea mays HOM05D005844 ORTHO05D007203 1.6e-91 340.1 228 68.9
A04p13570 Brassica napus HOM05D005844 ORTHO05D007203 2.1e-91 339.7 286 64.0
PSO111G0092 Papaver somniferum HOM05D005844 ORTHO05D007203 2.1e-91 339.7 236 68.2
C04p47350 Brassica napus HOM05D005844 ORTHO05D007203 7.9e-91 337.8 286 62.2
Thhalv10027875m.g Eutrema salsugineum HOM05D005844 ORTHO05D007203 3.9e-90 335.5 286 60.8
Cfa007344 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.6e-88 330.1 245 67.8
Haze_14753 Corylus avellana HOM05D005844 ORTHO05D007203 2.1e-88 329.7 262 63.4
MELO3C021585.2 Cucumis melo HOM05D005844 ORTHO05D007203 6.9e-87 324.7 284 58.1
CSS0002651 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 1.2e-86 323.9 283 60.1
HPP92_020245 Vanilla planifolia HOM05D005844 ORTHO05D007203 3.4e-86 322.4 281 57.3
Psat4g044480 Pisum sativum HOM05D005844 ORTHO05D007203 1.7e-85 320.1 260 61.5
CDE09G0856 Ceratophyllum demersum HOM05D005844 ORTHO05D007203 3.9e-82 308.9 201 72.1
Glyma.19G056800 Glycine max HOM05D005844 ORTHO05D007203 5.1e-82 308.5 271 58.7
PSO754G0028 Papaver somniferum HOM05D005844 ORTHO05D007203 7.4e-81 304.7 259 57.5
Mapoly0055s0119 Marchantia polymorpha HOM05D005844 ORTHO05D007203 1.3e-80 303.9 226 62.4
Lj7A600G48 Lonicera japonica HOM05D005844 ORTHO05D007203 1.6e-80 303.5 181 79.0
AagrBONN_evm.TU.Sc2ySwM_344.1282 Anthoceros agrestis HOM05D005844 ORTHO05D007203 1.8e-79 300.1 234 61.5
SMO169G0126 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 1.8e-79 300.1 221 65.2
Sed0014974 Sechium edule HOM05D005844 ORTHO05D007203 4.1e-79 298.9 237 63.7
arahy.Tifrunner.gnm1.ann1.V6CENM Arachis hypogaea HOM05D005844 ORTHO05D007203 6.9e-79 298.1 234 63.2
TAR629G2614 Trochodendron aralioides HOM05D005844 ORTHO05D007203 1.7e-77 293.5 176 77.8
Peaxi162Scf00129g01647 Petunia axillaris HOM05D005844 ORTHO05D007203 2.2e-77 293.1 183 77.0
BolC4t26336H Brassica oleracea HOM05D005844 ORTHO05D007203 2.9e-77 292.7 267 58.4
BraA04t17017Z Brassica rapa HOM05D005844 ORTHO05D007203 2.9e-77 292.7 267 57.3
Ca_08532_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 2.9e-77 292.7 270 57.4
Glyma.16G069400 Glycine max HOM05D005844 ORTHO05D007203 2.9e-77 292.7 256 59.8
VMungo1215G2157 Vigna mungo HOM05D005844 ORTHO05D007203 6.5e-77 291.6 250 56.8
Pp3c18_8570 Physcomitrium patens HOM05D005844 ORTHO05D007203 1.9e-76 290.0 225 60.9
EL10Ac6g14092 Beta vulgaris HOM05D005844 ORTHO05D007203 5.5e-76 288.5 233 62.2
CBR_g37477 Chara braunii HOM05D005844 ORTHO05D007203 5.5e-76 288.5 222 63.1
Ca_25854_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 7.2e-76 288.1 221 65.2
MBI06_g16054_MAGBIO Magnolia biondii HOM05D005844 ORTHO05D007203 2.7e-75 286.2 233 59.7
Hma1.2p1_1747F.1_g300470 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 3.3e-73 279.3 183 73.2
Lsat_1_v5_gn_1_11001 Lactuca sativa HOM05D005844 ORTHO05D007203 4.4e-73 278.9 174 77.6
CARHR261450 Cardamine hirsuta HOM05D005844 ORTHO05D007203 2.4e-71 273.1 179 74.3
CAN.G473.16 Capsicum annuum HOM05D005844 ORTHO05D007203 1.0e-66 257.7 163 76.7
Cfa007349 Carpinus fangiana HOM05D005844 ORTHO05D007203 3.0e-66 256.1 240 59.2
MCO16G365 Micromonas commoda HOM05D005844 ORTHO05D007203 5.0e-61 238.8 225 54.2
Ah.03g137020 Amaranthus hybridus HOM05D001812 ORTHO05D001874 4.0e-58 229.2 192 60.9
Cre07.g323450 Chlamydomonas reinhardtii HOM05D005844 ORTHO05D007203 6.5e-53 211.8 265 43.0
SHI16461 Sapria himalayana HOM05D005844 ORTHO05D007203 2.0e-46 190.3 308 37.7
Atru.chr6.2417 Acer truncatum HOM05D005844 ORTHO05D007203 2.7e-46 189.9 116 78.4
PRCOL_00001214 Prasinoderma coloniale HOM05D005844 ORTHO05D007203 3.8e-45 186.0 267 40.1
TPR.G11046 Trifolium pratense HOM05D005844 ORTHO05D007203 9.5e-44 181.4 114 70.2
TPR.G1078 Trifolium pratense HOM05D005844 ORTHO05D007203 2.8e-43 179.9 120 65.8
vmacro09039 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 1.4e-42 177.6 220 46.8
TAR629G1250 Trochodendron aralioides HOM05D005844 ORTHO05D007203 9.2e-39 164.9 127 65.4
TPR.G35964 Trifolium pratense HOM05D005844 ORTHO05D007203 1.2e-38 164.5 114 72.8
SMO202G0011 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 4.4e-33 146.0 116 62.1
BolC4t27198H Brassica oleracea HOM05D005844 ORTHO05D007203 9.5e-28 128.3 131 55.7
Cfa024741 Carpinus fangiana HOM05D005844 ORTHO05D007203 2.8e-27 126.7 192 38.0
Atru.chr2.3681 Acer truncatum HOM05D005844 ORTHO05D007203 4.7e-27 125.9 77 76.6
QL12p001810 Quercus lobata HOM05D005844 ORTHO05D007203 1.5e-25 120.9 72 75.0
Rhsim10G0015100 Rhododendron simsii HOM05D014363 ORTHO05D019497 3.7e-24 116.3 78 71.8
SEGI_32629 Sequoiadendron giganteum HOM05D005844 ORTHO05D007203 7.8e-22 108.6 81 66.7
AUR62043289 Chenopodium quinoa HOM05D005844 ORTHO05D007203 3.7e-16 89.7 75 58.7
CARHR261460 Cardamine hirsuta HOM05D005844 ORTHO05D007203 2.4e-15 87.0 56 71.4
SHI16462 Sapria himalayana HOM05D005844 ORTHO05D007203 1.5e-09 67.8 64 51.6


User provided reference genes

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