Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01359 Erythranthe guttata HOM05D021183 ORTHO05D016419 1.2e-66 256.5 142 100.0
Dinv35029 Davidia involucrata HOM05D021183 ORTHO05D016419 1.6e-15 86.7 150 49.3
Rhsim10G0027300 Rhododendron simsii HOM05D034142 ORTHO05D016419 3.4e-13 79.0 93 48.4
Cc07_g02550 Coffea canephora HOM05D021183 ORTHO05D016419 7.0e-11 71.2 173 37.6
MD17G1039400 Malus domestica HOM05D000270 ORTHO05D016419 6.6e-09 64.7 73 45.2
CSS0027129 Camellia sinensis var. sinensis HOM05D021183 ORTHO05D016419 2.5e-08 62.8 97 50.5
Actinidia33973 Actinidia chinensis HOM05D021183 ORTHO05D016419 3.3e-08 62.4 70 45.7
MSTRG.3307 Avicennia marina HOM05D021183 ORTHO05D016419 4.3e-08 62.0 173 43.9
FAN05G2150 Fragaria x ananassa HOM05D000270 ORTHO05D000163 8.0e-07 57.8 70 41.4
MD17G1039200 Malus domestica HOM05D000270 ORTHO05D000163 8.0e-07 57.8 73 39.7
MD09G1038100 Malus domestica HOM05D000270 ORTHO05D000163 1.4e-06 57.0 67 43.3
Cfa007464 Carpinus fangiana HOM05D000270 ORTHO05D000163 1.8e-06 56.6 68 41.2
FAN14G0834 Fragaria x ananassa HOM05D000270 ORTHO05D000163 3.0e-06 55.8 71 42.3
FAN14G3799 Fragaria x ananassa HOM05D000270 ORTHO05D000163 3.0e-06 55.8 71 42.3
RcHm_v2.0_Chr2g0170521 Rosa chinensis HOM05D000270 ORTHO05D000163 3.0e-06 55.8 62 45.2
TPR.G31459 Trifolium pratense HOM05D000270 ORTHO05D000163 3.0e-06 55.8 62 43.5
CSS0035575 Camellia sinensis var. sinensis HOM05D000270 ORTHO05D000163 4.0e-06 55.5 62 43.5
FvH4_6g50260 Fragaria vesca HOM05D000270 ORTHO05D000163 4.0e-06 55.5 69 40.6
FAN09G1638 Fragaria x ananassa HOM05D000270 ORTHO05D000163 4.0e-06 55.5 69 40.6
Glyma.13G069900 Glycine max HOM05D000270 ORTHO05D000163 4.0e-06 55.5 70 41.4
CSS0011434 Camellia sinensis var. sinensis HOM05D000270 ORTHO05D000163 5.2e-06 55.1 62 45.2
CSS0019366 Camellia sinensis var. sinensis HOM05D000270 ORTHO05D000163 5.2e-06 55.1 62 45.2
FAN02G4170 Fragaria x ananassa HOM05D000270 ORTHO05D000163 5.2e-06 55.1 62 43.5
Glyma.19G013000 Glycine max HOM05D000270 ORTHO05D000163 5.2e-06 55.1 62 43.5
Lalb_Chr21g0319311 Lupinus albus HOM05D000270 ORTHO05D000163 5.2e-06 55.1 62 41.9
Manes.17G119301 Manihot esculenta HOM05D000270 ORTHO05D000163 5.2e-06 55.1 70 41.4
Prupe.3G279800 Prunus persica HOM05D000270 ORTHO05D000163 5.2e-06 55.1 61 41.0
Rhsim08G0057100 Rhododendron simsii HOM05D056986 ORTHO05D338611 5.2e-06 55.1 40 62.5
Rhsim08G0061300 Rhododendron simsii HOM05D056986 ORTHO05D338320 5.2e-06 55.1 40 62.5
CiPaw.04G022700 Carya illinoinensis HOM05D000270 ORTHO05D000163 8.9e-06 54.3 69 39.1


User provided reference genes

Program Settings