Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01334 Erythranthe guttata HOM05D001960 ORTHO05D007725 1.4e-182 642.9 341 100.0
Migut.K01335 Erythranthe guttata HOM05D001960 ORTHO05D007725 1.5e-123 446.8 230 97.0
MSTRG.15488 Avicennia marina HOM05D001960 ORTHO05D007725 6.5e-95 351.7 231 77.9
Oeu060916.1 Olea europaea HOM05D001960 ORTHO05D007725 6.5e-95 351.7 229 78.2
SalBow1G8169 Salvia bowleyana HOM05D001960 ORTHO05D007725 3.2e-94 349.4 235 76.6
SGA_v2.0_scaffold30G12523 Striga asiatica HOM05D001960 ORTHO05D007725 1.2e-93 347.4 236 76.3
Atru.chr8.1915 Acer truncatum HOM05D001960 ORTHO05D007725 3.7e-90 335.9 230 74.3
Oeu033340.1 Olea europaea HOM05D001960 ORTHO05D007725 1.3e-87 327.4 230 71.7
CAN.G206.108 Capsicum annuum HOM05D001960 ORTHO05D007725 1.1e-86 324.3 240 70.8
CSS0036057 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D007725 1.4e-86 323.9 239 73.2
Actinidia06068 Actinidia chinensis HOM05D001960 ORTHO05D007725 3.2e-86 322.8 234 73.5
Nitab4.5_0000564g0320 Nicotiana tabacum HOM05D001960 ORTHO05D007725 6.7e-84 315.1 236 70.8
Nitab4.5_0002265g0270 Nicotiana tabacum HOM05D001960 ORTHO05D007725 6.7e-84 315.1 236 71.6
Ciclev10011611m.g Citrus clementina HOM05D001960 ORTHO05D007725 1.5e-83 313.9 234 72.2
QL02p080348 Quercus lobata HOM05D001960 ORTHO05D007725 1.9e-83 313.5 235 70.6
Solyc02g087640.3 Solanum lycopersicum HOM05D001960 ORTHO05D007725 1.9e-83 313.5 234 71.8
RhsimUnG0055000 Rhododendron simsii HOM05D001960 ORTHO05D007725 3.3e-83 312.8 233 71.2
Thecc.04G074100 Theobroma cacao HOM05D001960 ORTHO05D007725 3.3e-83 312.8 233 71.7
Gohir.D04G050500 Gossypium hirsutum HOM05D001960 ORTHO05D007725 4.3e-83 312.4 233 71.2
PGSC0003DMG400001411 Solanum tuberosum HOM05D001960 ORTHO05D007725 5.7e-83 312.0 234 71.4
Cfa007507 Carpinus fangiana HOM05D001960 ORTHO05D007725 7.4e-83 311.6 247 69.6
Gorai.012G056000 Gossypium raimondii HOM05D001960 ORTHO05D007725 1.3e-82 310.8 233 70.8
Sopen02g032390 Solanum pennellii HOM05D001960 ORTHO05D007725 1.6e-82 310.5 234 70.9
RcHm_v2.0_Chr2g0169211 Rosa chinensis HOM05D001960 ORTHO05D007725 3.7e-82 309.3 233 72.5
Manes.17G020800 Manihot esculenta HOM05D001960 ORTHO05D007725 1.8e-81 307.0 235 71.1
Haze_14586 Corylus avellana HOM05D001960 ORTHO05D007725 9.0e-81 304.7 247 67.2
CANSAT64G2224 Cannabis sativa HOM05D001960 ORTHO05D007725 1.5e-80 303.9 238 70.2
MD09G1045900 Malus domestica HOM05D001960 ORTHO05D007725 2.0e-80 303.5 241 70.1
Cc01_g00810 Coffea canephora HOM05D001960 ORTHO05D007725 4.5e-80 302.4 239 69.5
MD17G1046800 Malus domestica HOM05D001960 ORTHO05D007725 1.7e-79 300.4 239 69.9
Hma1.2p1_1232F.1_g268880 Hydrangea macrophylla HOM05D001960 ORTHO05D007725 2.2e-79 300.1 176 81.8
TWI34G1416 Tripterygium wilfordii HOM05D001960 ORTHO05D007725 2.9e-79 299.7 234 67.1
Prupe.3G272300 Prunus persica HOM05D001960 ORTHO05D007725 5.0e-79 298.9 239 70.7
Hund13245 Selenicereus undatus HOM05D001960 ORTHO05D007725 5.0e-79 298.9 239 67.4
CARHR286600 Cardamine hirsuta HOM05D001960 ORTHO05D007725 1.1e-78 297.7 232 68.5
BcaC06g30901 Brassica carinata HOM05D001960 ORTHO05D007725 1.9e-78 297.0 235 66.0
MELO3C021973.2 Cucumis melo HOM05D001960 ORTHO05D007725 1.9e-78 297.0 229 67.2
TAR371G1229 Trochodendron aralioides HOM05D001960 ORTHO05D007725 1.9e-78 297.0 238 67.2
Thhalv10004119m.g Eutrema salsugineum HOM05D001960 ORTHO05D007725 2.5e-78 296.6 232 68.1
CiPaw.03G030400 Carya illinoinensis HOM05D001960 ORTHO05D007725 3.2e-78 296.2 247 64.8
EL10Ac2g03435 Beta vulgaris HOM05D001960 ORTHO05D007725 5.5e-78 295.4 236 66.9
GSVIVG01032604001 Vitis vinifera HOM05D001960 ORTHO05D007725 7.2e-78 295.0 238 67.6
ClCG09G018410 Citrullus lanatus HOM05D001960 ORTHO05D007725 9.4e-78 294.7 241 64.3
Sabra17G0069200 Salix brachista HOM05D001960 ORTHO05D007725 1.6e-77 293.9 235 66.8
Potri.017G077000 Populus trichocarpa HOM05D001960 ORTHO05D007725 2.1e-77 293.5 235 66.8
COL.COLO4_25201 Corchorus olitorius HOM05D001960 ORTHO05D007725 2.7e-77 293.1 234 69.2
Ca_20945_v3 Cicer arietinum L. HOM05D001960 ORTHO05D007725 4.6e-77 292.4 175 78.3
AT3G28700 Arabidopsis thaliana HOM05D001960 ORTHO05D007725 6.1e-77 292.0 233 68.7
arahy.Tifrunner.gnm1.ann1.9ZMQ3R Arachis hypogaea HOM05D001960 ORTHO05D007725 6.1e-77 292.0 220 67.7
THA.LOC104823928 Tarenaya hassleriana HOM05D001960 ORTHO05D007725 7.9e-77 291.6 230 67.8
AUR62038879 Chenopodium quinoa HOM05D001960 ORTHO05D007725 1.0e-76 291.2 196 71.9
Psat7g177520 Pisum sativum HOM05D001960 ORTHO05D007725 1.0e-76 291.2 175 76.6
AL5G18340 Arabidopsis lyrata HOM05D001960 ORTHO05D007725 1.8e-76 290.4 233 68.2
Sed0013706 Sechium edule HOM05D001960 ORTHO05D007725 1.8e-76 290.4 245 65.7
arahy.Tifrunner.gnm1.ann1.57V2RC Arachis hypogaea HOM05D001960 ORTHO05D007725 2.3e-76 290.0 220 67.7
DCAR_006720 Daucus carota HOM05D001960 ORTHO05D007725 2.3e-76 290.0 275 57.5
Sp2g17340 Schrenkiella parvula HOM05D001960 ORTHO05D007725 6.7e-76 288.5 232 64.7
BcaC06g33634 Brassica carinata HOM05D001960 ORTHO05D007725 8.8e-76 288.1 232 65.5
Carub.0005s0723 Capsella rubella HOM05D001960 ORTHO05D007725 1.1e-75 287.7 233 67.0
FAN05G4054 Fragaria x ananassa HOM05D001960 ORTHO05D007725 1.1e-75 287.7 237 66.2
TPR.G17186 Trifolium pratense HOM05D001960 ORTHO05D007725 1.5e-75 287.3 175 75.4
Sed0024340 Sechium edule HOM05D001960 ORTHO05D007725 2.0e-75 287.0 221 67.9
AUR62031644 Chenopodium quinoa HOM05D001960 ORTHO05D007725 2.6e-75 286.6 194 71.6
Glyma.11G099200 Glycine max HOM05D001960 ORTHO05D007725 3.3e-75 286.2 205 69.3
Eucgr.J02136 Eucalyptus grandis HOM05D001960 ORTHO05D007725 4.4e-75 285.8 248 61.3
C07p37650 Brassica napus HOM05D001960 ORTHO05D004348 5.7e-75 285.4 232 65.1
BolC7t44281H Brassica oleracea HOM05D001960 ORTHO05D007725 5.7e-75 285.4 232 65.1
Nn3g17123 Nelumbo nucifera HOM05D001960 ORTHO05D007725 9.7e-75 284.6 236 64.8
CsaV3_5G037870 Cucumis sativus L. HOM05D001960 ORTHO05D007725 1.3e-74 284.3 239 62.8
Medtr4g075200 Medicago truncatula HOM05D001960 ORTHO05D007725 2.8e-74 283.1 175 74.9
Sc10g0003830 Simmondsia chinensis HOM05D001960 ORTHO05D007725 2.8e-74 283.1 256 63.7
FvH4_6g49351 Fragaria vesca HOM05D001960 ORTHO05D007725 4.8e-74 282.3 173 78.6
Lj3g0011182 Lotus japonicus HOM05D001960 ORTHO05D007725 4.8e-74 282.3 175 73.7
Ca_19010_v3 Cicer arietinum L. HOM05D001960 ORTHO05D007725 1.1e-73 281.2 175 76.6
A06p40400 Brassica napus HOM05D001960 ORTHO05D004348 1.4e-73 280.8 233 64.4
BraA06t26958Z Brassica rapa HOM05D001960 ORTHO05D004348 1.4e-73 280.8 233 64.4
Phvul.011G027550 Phaseolus vulgaris HOM05D001960 ORTHO05D007725 6.9e-73 278.5 206 67.0
BolC9t53325H Brassica oleracea HOM05D001960 ORTHO05D007725 9.1e-73 278.1 232 63.4
VMungo1127G2029 Vigna mungo HOM05D001960 ORTHO05D007725 9.1e-73 278.1 206 66.0
PGR083G0481 Punica granatum HOM05D001960 ORTHO05D007725 1.2e-72 277.7 245 64.1
MBI15_g37231_MAGBIO Magnolia biondii HOM05D001960 ORTHO05D007725 7.7e-72 275.0 233 63.5
Os01g0588800 Oryza sativa ssp. japonica HOM05D001960 ORTHO05D007725 2.9e-71 273.1 181 71.8
HanXRQChr09g0265611 Helianthus annuus HOM05D001960 ORTHO05D007725 5.0e-71 272.3 225 66.2
Lsat_1_v5_gn_4_179920 Lactuca sativa HOM05D001960 ORTHO05D007725 8.5e-71 271.6 242 64.5
Lj7A401T79 Lonicera japonica HOM05D001960 ORTHO05D007725 1.4e-70 270.8 158 84.2
Lalb_Chr19g0139461 Lupinus albus HOM05D001960 ORTHO05D007725 1.9e-70 270.4 203 65.0
C09p03940 Brassica napus HOM05D001960 ORTHO05D007725 3.2e-70 269.6 186 69.4
Aa31LG2G4510 Aethionema arabicum HOM05D001960 ORTHO05D007725 7.2e-70 268.5 177 75.1
FAN14G4702 Fragaria x ananassa HOM05D001960 ORTHO05D007725 2.7e-69 266.5 159 79.9
PSO832G0234 Papaver somniferum HOM05D001960 ORTHO05D007725 2.7e-69 266.5 199 68.8
ATR1120G150 Amborella trichopoda HOM05D001960 ORTHO05D007725 1.4e-68 264.2 234 59.4
HPP92_022934 Vanilla planifolia HOM05D001960 ORTHO05D007725 3.0e-68 263.1 235 60.4
Aqoxy3G03264 Aquilegia oxysepala HOM05D001960 ORTHO05D007725 2.2e-66 256.9 152 78.3
SEGI_03019 Sequoiadendron giganteum HOM05D001960 ORTHO05D007725 1.2e-64 251.1 213 62.0
Pp3c8_16780 Physcomitrium patens HOM05D001960 ORTHO05D007725 1.7e-63 247.3 222 55.4
HPP92_022922 Vanilla planifolia HOM05D001960 ORTHO05D007725 1.2e-61 241.1 159 72.3
Peaxi162Scf00129g00533 Petunia axillaris HOM05D001960 ORTHO05D007725 8.0e-61 238.4 139 81.3
FAN02G2179 Fragaria x ananassa HOM05D001960 ORTHO05D007725 6.7e-60 235.3 259 55.2
Gohir.A05G364200 Gossypium hirsutum HOM05D001960 ORTHO05D007725 2.7e-56 223.4 154 71.4
Zm00001eb357440 Zea mays HOM05D001960 ORTHO05D007725 6.5e-55 218.8 175 60.6
vmacro05739 Vaccinium macrocarpon HOM05D001960 ORTHO05D007725 1.5e-54 217.6 205 59.0
Mapoly0027s0012 Marchantia polymorpha HOM05D001960 ORTHO05D007725 4.2e-54 216.1 220 55.5
AagrBONN_evm.TU.Sc2ySwM_368.2217 Anthoceros agrestis HOM05D001960 ORTHO05D007725 1.2e-53 214.5 157 64.3
CSS0006137 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D007725 6.1e-53 212.2 126 82.5
CDE05G2812 Ceratophyllum demersum HOM05D001960 ORTHO05D007725 2.3e-52 210.3 126 79.4
Ah.12g065370 Amaranthus hybridus HOM05D001960 ORTHO05D007725 1.8e-49 200.7 127 74.8
unitig_747.g21836 Utricularia gibba HOM05D001960 ORTHO05D007725 1.2e-48 198.0 242 51.2
ECA232G3528 Erigeron canadensis HOM05D001960 ORTHO05D007725 3.5e-48 196.4 116 80.2
BcaC04g23865 Brassica carinata HOM05D001960 ORTHO05D004348 1.8e-44 184.1 175 56.0
PSO591G0496 Papaver somniferum HOM05D001960 ORTHO05D007725 3.4e-43 179.9 246 47.2
Hma1.2p1_1232F.1_g268870 Hydrangea macrophylla HOM05D001960 ORTHO05D014729 9.2e-41 171.8 113 75.2
Cre02.g096400 Chlamydomonas reinhardtii HOM05D001960 ORTHO05D007725 2.9e-39 166.8 120 60.0
SMO200G0063 Selaginella moellendorffii HOM05D001960 ORTHO05D007725 1.2e-35 154.8 118 60.2
MCO09G443 Micromonas commoda HOM05D001960 ORTHO05D007725 2.2e-34 150.6 123 57.7
ECA232G0063 Erigeron canadensis HOM05D001960 ORTHO05D007725 2.4e-33 147.1 116 65.5
Actinidia23575 Actinidia chinensis HOM05D001960 ORTHO05D007725 7.8e-32 142.1 93 73.1
Dinv33716 Davidia involucrata HOM05D001960 ORTHO05D007725 1.5e-30 137.9 89 75.3
Ca_19017_v3 Cicer arietinum L. HOM05D000077 ORTHO05D002511 1.9e-30 137.5 91 68.1
Dinv06509 Davidia involucrata HOM05D001960 ORTHO05D014729 5.6e-30 136.0 83 80.7
Dinv34989 Davidia involucrata HOM05D001960 ORTHO05D007725 5.2e-28 129.4 93 72.0
SHI22231 Sapria himalayana HOM05D001960 ORTHO05D007725 4.9e-26 122.9 125 52.8
Cfa026330 Carpinus fangiana HOM05D001960 ORTHO05D007725 1.2e-24 118.2 120 47.5
CBR_g40650 Chara braunii HOM05D001960 ORTHO05D007725 1.9e-22 110.9 135 41.5
HPP92_017638 Vanilla planifolia HOM05D003031 ORTHO05D003371 7.1e-17 92.4 53 73.6
HPP92_003669 Vanilla planifolia HOM05D001960 ORTHO05D007725 1.9e-14 84.3 69 63.8
Oeu056605.1 Olea europaea HOM05D001875 ORTHO05D002019 4.0e-12 76.6 57 64.9
Actinidia27488 Actinidia chinensis HOM05D001960 ORTHO05D058277 7.6e-11 72.4 63 61.9
GSVIVG01021633001 Vitis vinifera HOM05D001960 ORTHO05D439898 5.1e-07 59.7 52 55.8


User provided reference genes

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