Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 1.8e-51 205.7 109 100.0
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 2.0e-21 105.9 107 61.7
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 4.9e-20 101.3 112 58.9
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 4.1e-19 98.2 110 60.0
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 7.0e-19 97.4 104 53.8
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.2e-18 96.7 59 76.3
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 2.0e-18 95.9 109 55.0
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 2.0e-18 95.9 107 55.1
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 5.9e-18 94.4 90 57.8
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 5.9e-18 94.4 102 54.9
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 7.8e-18 94.0 104 52.9
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 6.6e-17 90.9 107 50.5
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 1.5e-16 89.7 110 54.5
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 2.5e-16 89.0 92 54.3
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 3.3e-16 88.6 95 53.7
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 7.3e-16 87.4 107 49.5
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 1.2e-15 86.7 95 52.6
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 4.7e-15 84.7 121 48.8
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 1.4e-14 83.2 94 53.2
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 2.3e-14 82.4 116 48.3
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 3.0e-14 82.0 104 48.1
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 4.0e-14 81.6 59 66.1
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 6.8e-14 80.9 96 49.0
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 8.9e-14 80.5 79 63.3
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 1.5e-13 79.7 104 50.0
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 2.0e-13 79.3 102 52.0
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 2.6e-13 79.0 106 48.1
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 3.4e-13 78.6 100 52.0
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 4.4e-13 78.2 106 49.1
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 5.8e-13 77.8 93 51.6
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 7.5e-13 77.4 97 50.5
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 2.2e-12 75.9 96 50.0
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 2.9e-12 75.5 68 61.8
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 2.9e-12 75.5 107 47.7
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 3.7e-12 75.1 53 67.9
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 4.9e-12 74.7 83 54.2
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 4.9e-12 74.7 82 52.4
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 8.3e-12 73.9 57 71.9
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.1e-11 73.6 101 49.5
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 1.4e-11 73.2 98 51.0
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 2.4e-11 72.4 57 59.6
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 3.2e-11 72.0 102 44.1
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 9.2e-11 70.5 111 45.0
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 9.2e-11 70.5 109 44.0
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 1.2e-10 70.1 95 53.7
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 2.0e-10 69.3 95 43.2
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 2.0e-10 69.3 111 42.3
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 2.0e-10 69.3 81 55.6
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 2.0e-10 69.3 98 45.9
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 2.7e-10 68.9 101 45.5
CDE10G0699 Ceratophyllum demersum HOM05D007413 ORTHO05D009357 4.6e-10 68.2 91 45.1
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 4.6e-10 68.2 106 42.5
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 4.6e-10 68.2 102 45.1
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 6.0e-10 67.8 60 55.0
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 1.0e-09 67.0 58 55.2
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 1.0e-09 67.0 56 62.5
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 1.0e-09 67.0 94 44.7
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 1.3e-09 66.6 97 44.3
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 1.3e-09 66.6 61 60.7
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 2.3e-09 65.9 89 43.8
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 3.0e-09 65.5 60 60.0
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 3.9e-09 65.1 97 44.3
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 6.6e-09 64.3 90 43.3
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 6.6e-09 64.3 93 47.3
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 6.6e-09 64.3 112 38.4
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 8.6e-09 63.9 95 44.2
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 8.6e-09 63.9 97 43.3
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 8.6e-09 63.9 96 39.6
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 1.5e-08 63.2 93 48.4
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.5e-08 63.2 104 44.2
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 1.5e-08 63.2 108 45.4
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 2.5e-08 62.4 104 45.2
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.5e-08 62.4 104 45.2
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.5e-08 62.4 104 45.2
Rhsim08G0074700 Rhododendron simsii HOM05D007413 ORTHO05D009357 2.5e-08 62.4 39 84.6
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 3.3e-08 62.0 110 40.0
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 3.3e-08 62.0 110 40.0
CDE10G0216 Ceratophyllum demersum HOM05D001577 ORTHO05D008017 5.6e-08 61.2 104 40.4
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 5.6e-08 61.2 108 42.6
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 1.6e-07 59.7 108 40.7
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 2.1e-07 59.3 121 39.7
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 2.1e-07 59.3 113 41.6
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.6e-07 58.5 101 43.6
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 3.6e-07 58.5 73 46.6
Sp7g02750 Schrenkiella parvula HOM05D007413 ORTHO05D009357 3.6e-07 58.5 93 44.1
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 1.4e-06 56.6 52 53.8
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 1.8e-06 56.2 99 41.4
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 3.1e-06 55.5 95 44.2
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 3.1e-06 55.5 83 42.2
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 5.2e-06 54.7 98 37.8
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 6.8e-06 54.3 103 39.8
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 8.9e-06 53.9 108 38.0
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 8.9e-06 53.9 108 38.0
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 8.9e-06 53.9 108 38.0


User provided reference genes

Program Settings