Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.4e-113 412.9 202 100.0
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 8.3e-74 280.8 185 71.4
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 4.1e-73 278.5 180 73.3
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 1.7e-71 273.1 180 70.6
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 2.3e-71 272.7 189 70.4
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 2.9e-71 272.3 180 70.0
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 2.5e-70 269.2 183 69.9
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 4.3e-70 268.5 172 72.1
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 1.6e-69 266.5 185 71.4
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 2.6e-67 259.2 191 66.5
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 4.4e-67 258.5 185 66.5
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 5.8e-67 258.1 186 69.9
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 3.7e-66 255.4 191 68.6
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 4.9e-66 255.0 186 67.2
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 4.9e-66 255.0 174 71.3
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 8.3e-66 254.2 190 65.3
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 2.4e-65 252.7 183 68.9
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 4.6e-64 248.4 175 70.3
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 6.0e-64 248.1 185 67.0
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 2.3e-63 246.1 177 66.1
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 2.3e-63 246.1 186 63.4
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 3.9e-63 245.4 191 63.9
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 3.9e-63 245.4 177 66.1
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 3.9e-63 245.4 186 65.6
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 5.0e-63 245.0 187 63.6
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 5.0e-63 245.0 194 63.4
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 5.0e-63 245.0 138 80.4
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 8.6e-63 244.2 198 63.6
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 1.1e-62 243.8 185 64.3
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 1.5e-62 243.4 190 63.2
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 1.9e-62 243.0 190 62.1
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 4.3e-62 241.9 175 68.6
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 4.3e-62 241.9 169 65.7
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 5.6e-62 241.5 170 68.8
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 5.6e-62 241.5 189 60.8
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 5.6e-62 241.5 158 72.8
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 5.6e-62 241.5 181 65.2
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 7.3e-62 241.1 170 65.9
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 1.6e-61 240.0 195 63.6
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 2.1e-61 239.6 170 69.4
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 3.6e-61 238.8 186 62.9
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 3.6e-61 238.8 170 67.6
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 4.7e-61 238.4 170 68.8
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 8.0e-61 237.7 196 59.7
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 1.4e-60 236.9 170 68.8
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 1.4e-60 236.9 178 63.5
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 1.4e-60 236.9 202 58.4
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 1.8e-60 236.5 175 64.6
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 3.1e-60 235.7 169 66.3
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 4.0e-60 235.3 170 68.8
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 4.0e-60 235.3 171 67.3
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 4.0e-60 235.3 170 66.5
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 5.2e-60 235.0 208 58.7
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 6.8e-60 234.6 170 67.6
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 8.9e-60 234.2 187 62.0
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 1.2e-59 233.8 198 58.6
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 1.2e-59 233.8 172 65.1
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 1.5e-59 233.4 184 62.5
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 3.4e-59 232.3 208 58.2
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 3.4e-59 232.3 170 67.1
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 3.4e-59 232.3 170 67.1
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 3.4e-59 232.3 170 67.1
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 3.4e-59 232.3 170 67.1
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 7.5e-59 231.1 137 76.6
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 7.5e-59 231.1 164 68.3
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 2.2e-58 229.6 197 60.9
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 8.3e-58 227.6 178 62.4
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 1.1e-57 227.3 147 70.7
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 1.4e-57 226.9 137 77.4
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 1.4e-57 226.9 167 64.7
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 1.4e-57 226.9 186 62.4
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 1.9e-57 226.5 193 60.6
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 4.1e-57 225.3 183 60.7
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 1.0e-55 220.7 169 62.7
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 1.3e-55 220.3 162 64.2
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.3e-55 220.3 162 64.2
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 1.3e-55 220.3 184 61.4
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.7e-55 219.9 210 55.2
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.3e-55 219.5 162 64.2
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 6.6e-55 218.0 158 69.6
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 1.9e-54 216.5 175 61.7
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 2.5e-54 216.1 161 64.0
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 4.3e-54 215.3 187 59.9
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 8.1e-53 211.1 175 59.4
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 8.1e-53 211.1 173 59.0
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.8e-52 209.9 158 63.3
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.2e-51 207.2 193 56.0
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 2.0e-51 206.5 209 54.5
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 4.4e-51 205.3 171 61.4
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 1.9e-49 199.9 135 66.7
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 3.5e-48 195.7 150 65.3
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 2.8e-45 186.0 113 71.7
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.4e-44 183.7 203 53.2
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.2e-43 180.6 139 64.0
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 2.2e-42 176.4 190 51.1
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 4.3e-38 162.2 182 48.9
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 8.1e-37 157.9 163 49.1
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.1e-36 157.5 199 46.7
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 6.0e-32 141.7 85 72.9
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 3.0e-31 139.4 142 47.9
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 1.5e-27 127.1 159 44.0
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 5.4e-25 118.6 66 75.8
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 3.5e-24 115.9 82 65.9
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 3.3e-22 109.4 91 62.6
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 2.9e-18 96.3 124 46.0
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 3.5e-16 89.4 63 66.7
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 6.7e-15 85.1 54 66.7
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.9e-14 83.6 37 97.3
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 1.3e-13 80.9 87 54.0
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 3.7e-13 79.3 105 48.6
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 6.2e-13 78.6 62 62.9
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 5.1e-07 58.9 112 30.4


User provided reference genes

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