Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 2.5e-93 345.5 182 100.0
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 3.6e-52 208.8 136 78.7
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 5.2e-51 204.9 143 74.1
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 5.2e-51 204.9 150 72.0
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 2.0e-50 203.0 179 64.8
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 3.4e-50 202.2 179 64.2
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 9.8e-50 200.7 159 66.7
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 1.9e-48 196.4 136 73.5
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 3.2e-48 195.7 126 80.2
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 4.1e-48 195.3 142 69.0
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 3.5e-47 192.2 159 62.9
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 1.0e-46 190.7 174 60.9
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 8.6e-46 187.6 157 64.3
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 1.1e-45 187.2 175 60.6
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 4.7e-44 181.8 114 77.2
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 8.1e-44 181.0 162 63.6
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 1.1e-43 180.6 115 75.7
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 1.1e-43 180.6 137 68.6
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 1.4e-43 180.3 138 65.2
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 1.4e-43 180.3 140 65.7
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.8e-43 179.9 182 56.0
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 1.8e-43 179.9 137 68.6
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 3.1e-43 179.1 182 56.0
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 3.1e-43 179.1 140 65.7
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 3.1e-43 179.1 133 69.2
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 4.0e-43 178.7 140 65.0
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 5.2e-43 178.3 136 67.6
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 5.2e-43 178.3 138 66.7
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 8.9e-43 177.6 150 60.7
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 1.2e-42 177.2 135 67.4
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 1.5e-42 176.8 138 65.2
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.5e-42 176.8 183 53.6
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 2.0e-42 176.4 180 58.3
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 2.0e-42 176.4 144 67.4
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 2.0e-42 176.4 140 67.1
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 2.6e-42 176.0 180 58.3
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 2.6e-42 176.0 133 67.7
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 2.6e-42 176.0 140 65.0
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 3.4e-42 175.6 138 67.4
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 3.4e-42 175.6 136 66.2
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 4.4e-42 175.3 186 52.7
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 4.4e-42 175.3 136 63.2
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 5.8e-42 174.9 155 58.7
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 5.8e-42 174.9 152 59.9
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 7.5e-42 174.5 138 64.5
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 7.5e-42 174.5 141 64.5
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 7.5e-42 174.5 168 58.9
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 9.8e-42 174.1 134 66.4
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 9.8e-42 174.1 178 56.7
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.3e-41 173.7 154 59.1
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 1.7e-41 173.3 144 62.5
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 2.9e-41 172.6 132 65.2
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 2.9e-41 172.6 145 61.4
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 3.7e-41 172.2 169 56.2
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 3.7e-41 172.2 145 61.4
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 3.7e-41 172.2 135 68.9
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 4.9e-41 171.8 127 70.1
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 4.9e-41 171.8 127 70.1
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 4.9e-41 171.8 109 73.4
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 8.3e-41 171.0 135 61.5
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 1.1e-40 170.6 137 62.8
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 1.4e-40 170.2 182 54.9
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 2.4e-40 169.5 184 54.3
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 7.1e-40 167.9 110 71.8
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 9.2e-40 167.5 138 62.3
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.2e-39 167.2 123 70.7
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 1.6e-39 166.8 136 61.0
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 2.1e-39 166.4 114 66.7
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 6.0e-39 164.9 114 70.2
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 7.8e-39 164.5 123 69.9
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 7.8e-39 164.5 121 71.1
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 1.0e-38 164.1 146 56.2
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 1.0e-38 164.1 146 56.2
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 1.7e-38 163.3 140 62.9
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 1.7e-38 163.3 140 62.9
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.7e-38 163.3 142 63.4
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 2.3e-38 162.9 140 62.9
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.0e-38 162.5 149 59.7
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.9e-38 162.2 149 59.7
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.9e-38 162.2 149 59.7
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 5.1e-38 161.8 140 62.9
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 5.1e-38 161.8 148 59.5
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 6.6e-38 161.4 138 62.3
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 6.6e-38 161.4 138 62.3
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 6.6e-38 161.4 140 62.1
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 6.6e-38 161.4 140 62.1
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 8.6e-38 161.0 147 55.8
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 1.1e-37 160.6 138 61.6
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 1.9e-37 159.8 138 60.9
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 1.9e-37 159.8 138 60.9
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 3.3e-37 159.1 139 61.9
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 4.3e-37 158.7 107 72.9
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 4.3e-37 158.7 173 50.9
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 7.3e-37 157.9 138 60.1
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 1.2e-36 157.1 136 60.3
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 1.2e-36 157.1 136 59.6
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 3.6e-36 155.6 135 62.2
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 3.6e-36 155.6 137 59.9
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 3.6e-36 155.6 138 60.1
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 1.4e-35 153.7 188 48.9
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 4.0e-35 152.1 192 48.4
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 2.0e-34 149.8 102 72.5
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 3.8e-33 145.6 183 49.2
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 1.1e-32 144.1 87 78.2
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 1.2e-31 140.6 109 62.4
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 6.0e-31 138.3 171 48.0
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 1.3e-30 137.1 159 48.4
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 3.9e-30 135.6 135 55.6
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 8.6e-30 134.4 110 57.3
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 3.3e-29 132.5 114 59.6
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 5.6e-29 131.7 108 58.3
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 4.7e-28 128.6 187 43.9
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 1.1e-27 127.5 146 50.7
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 2.4e-27 126.3 114 58.8
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 5.2e-27 125.2 114 58.8
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.2e-26 124.0 123 54.5
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 3.4e-26 122.5 146 50.0
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 9.9e-26 120.9 103 66.0
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 1.3e-17 94.0 107 48.6
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 1.6e-15 87.0 99 46.5
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 4.3e-13 79.0 67 58.2
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 6.9e-11 71.6 61 59.0
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 1.1e-08 64.3 69 53.6
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 2.1e-07 60.1 81 43.2
Manes.01G158400 Manihot esculenta HOM05D006312 ORTHO05D007843 6.7e-06 55.1 63 52.4


User provided reference genes

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