Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01201 Erythranthe guttata HOM05D006104 ORTHO05D008303 2.8e-233 811.6 418 100.0
SGA_v2.0_scaffold199G41251 Striga asiatica HOM05D006104 ORTHO05D008303 2.4e-168 595.9 416 76.9
MSTRG.15618 Avicennia marina HOM05D006104 ORTHO05D008303 1.1e-165 587.0 423 75.4
PGSC0003DMG400021455 Solanum tuberosum HOM05D006104 ORTHO05D008303 1.3e-150 537.0 432 67.1
Solyc02g036470.4 Solanum lycopersicum HOM05D006104 ORTHO05D008303 7.3e-149 531.2 427 66.3
Sopen02g011830 Solanum pennellii HOM05D006104 ORTHO05D008303 9.5e-149 530.8 428 66.6
Peaxi162Scf00784g00028 Petunia axillaris HOM05D006104 ORTHO05D008303 4.0e-147 525.4 413 68.0
Nitab4.5_0002297g0090 Nicotiana tabacum HOM05D006104 ORTHO05D008303 4.9e-145 518.5 357 74.8
Rhsim10G0186700 Rhododendron simsii HOM05D006104 ORTHO05D008303 5.4e-144 515.0 407 68.3
Nitab4.5_0008083g0020 Nicotiana tabacum HOM05D006104 ORTHO05D008303 1.6e-143 513.5 353 73.9
arahy.Tifrunner.gnm1.ann1.B0P6V2 Arachis hypogaea HOM05D006104 ORTHO05D008303 2.1e-143 513.1 359 73.3
Lsat_1_v5_gn_8_114940 Lactuca sativa HOM05D006104 ORTHO05D008303 1.0e-142 510.8 431 64.3
Oeu058858.1 Olea europaea HOM05D006104 ORTHO05D008303 1.3e-142 510.4 325 80.6
Dinv19095 Davidia involucrata HOM05D006104 ORTHO05D008303 6.6e-142 508.1 423 66.2
arahy.Tifrunner.gnm1.ann1.W9ZMNH Arachis hypogaea HOM05D006104 ORTHO05D008303 1.5e-141 506.9 430 64.2
Lj6g0001971 Lotus japonicus HOM05D006104 ORTHO05D008303 3.1e-139 499.2 348 72.7
ECA232G1605 Erigeron canadensis HOM05D006104 ORTHO05D008303 5.2e-139 498.4 362 70.7
Cpa.g.sc108.21 Carica papaya HOM05D006104 ORTHO05D008303 5.8e-138 495.0 340 73.2
HanXRQChr15g0486461 Helianthus annuus HOM05D006104 ORTHO05D008303 5.8e-138 495.0 417 65.0
Potri.012G145300 Populus trichocarpa HOM05D006104 ORTHO05D008303 2.9e-137 492.7 362 71.5
Glyma.18G047900 Glycine max HOM05D006104 ORTHO05D008303 4.9e-137 491.9 343 72.3
Glyma.11G202900 Glycine max HOM05D006104 ORTHO05D008303 1.4e-136 490.3 427 62.5
PSO063G5766 Papaver somniferum HOM05D006104 ORTHO05D008303 1.4e-136 490.3 392 66.3
Thecc.04G056600 Theobroma cacao HOM05D006104 ORTHO05D008303 3.2e-136 489.2 382 67.5
CANSAT78G2105 Cannabis sativa HOM05D006104 ORTHO05D008303 4.1e-136 488.8 429 63.6
CAN.G304.9 Capsicum annuum HOM05D006104 ORTHO05D008303 4.1e-136 488.8 373 69.2
AUR62037537 Chenopodium quinoa HOM05D006104 ORTHO05D008303 5.4e-136 488.4 379 67.8
SalBow5G0256 Salvia bowleyana HOM05D006104 ORTHO05D008303 1.2e-135 487.3 422 67.1
Cfa008019 Carpinus fangiana HOM05D006104 ORTHO05D008303 2.1e-135 486.5 362 70.4
Hund22221 Selenicereus undatus HOM05D006104 ORTHO05D008303 2.1e-135 486.5 427 63.7
Gohir.D12G051700 Gossypium hirsutum HOM05D006104 ORTHO05D008303 3.5e-135 485.7 413 63.7
Gorai.008G055000 Gossypium raimondii HOM05D006104 ORTHO05D008303 3.5e-135 485.7 413 63.9
Ah.06g191390 Amaranthus hybridus HOM05D006104 ORTHO05D008303 7.8e-135 484.6 378 66.7
Haze_14041 Corylus avellana HOM05D006104 ORTHO05D008303 7.8e-135 484.6 385 67.3
CiPaw.03G009900 Carya illinoinensis HOM05D006104 ORTHO05D008303 2.3e-134 483.0 437 61.8
TWI74G1645 Tripterygium wilfordii HOM05D006104 ORTHO05D008303 2.3e-134 483.0 404 64.9
FvH4_5g39720 Fragaria vesca HOM05D006104 ORTHO05D008303 3.9e-134 482.3 422 62.1
AUR62035547 Chenopodium quinoa HOM05D006104 ORTHO05D008303 8.6e-134 481.1 368 69.8
Ciclev10011871m.g Citrus clementina HOM05D006104 ORTHO05D008303 1.5e-133 480.3 337 73.3
FAN18G3652 Fragaria x ananassa HOM05D006104 ORTHO05D008303 2.5e-133 479.6 422 61.8
ClCG01G008400 Citrullus lanatus HOM05D006104 ORTHO05D008303 4.3e-133 478.8 397 64.5
RcHm_v2.0_Chr7g0242021 Rosa chinensis HOM05D006104 ORTHO05D008303 7.3e-133 478.0 361 70.4
Duzib138G0961 Durio zibethinus HOM05D006104 ORTHO05D008303 9.6e-133 477.6 422 62.3
Aa31LG5G13170 Aethionema arabicum HOM05D006104 ORTHO05D008303 1.6e-132 476.9 435 62.1
Ca_15100_v3 Cicer arietinum L. HOM05D006104 ORTHO05D008303 2.8e-132 476.1 379 67.5
MD09G1187600 Malus domestica HOM05D006104 ORTHO05D008303 3.6e-132 475.7 427 61.6
QL02p055508 Quercus lobata HOM05D006104 ORTHO05D008303 3.6e-132 475.7 312 76.3
TAR371G0041 Trochodendron aralioides HOM05D006104 ORTHO05D008303 3.6e-132 475.7 323 74.6
Sp3g01720 Schrenkiella parvula HOM05D006104 ORTHO05D008303 1.1e-131 474.2 429 62.0
EL10Ac1g01448 Beta vulgaris HOM05D006104 ORTHO05D008303 1.4e-131 473.8 388 65.2
DCAR_003391 Daucus carota HOM05D006104 ORTHO05D008303 1.8e-131 473.4 319 75.2
Carub.0003s0179 Capsella rubella HOM05D006104 ORTHO05D008303 3.1e-131 472.6 425 60.7
PGR042G1876 Punica granatum HOM05D006104 ORTHO05D008303 4.0e-131 472.2 344 70.3
Thhalv10020801m.g Eutrema salsugineum HOM05D006104 ORTHO05D008303 2.6e-130 469.5 424 61.1
THA.LOC104820927 Tarenaya hassleriana HOM05D006104 ORTHO05D008303 2.6e-130 469.5 362 67.4
CARHR076690 Cardamine hirsuta HOM05D006104 ORTHO05D008303 4.4e-130 468.8 426 62.4
MBI06_g37978_MAGBIO Magnolia biondii HOM05D006104 ORTHO05D008303 9.9e-130 467.6 367 67.3
AL3G12080 Arabidopsis lyrata HOM05D006104 ORTHO05D008303 1.7e-129 466.8 426 60.3
BNapus_Darmor_BZH_scaffold_122p00170 Brassica napus HOM05D006104 ORTHO05D008303 2.2e-129 466.5 422 60.9
BraA01t04624Z Brassica rapa HOM05D006104 ORTHO05D008303 2.2e-129 466.5 425 59.8
Atru.chr1.2189 Acer truncatum HOM05D006104 ORTHO05D008303 8.4e-129 464.5 295 79.7
Actinidia32997 Actinidia chinensis HOM05D006104 ORTHO05D008303 2.4e-128 463.0 335 72.2
Cc07_g12610 Coffea canephora HOM05D006104 ORTHO05D008303 5.4e-128 461.8 279 81.7
Sabra12G0109100 Salix brachista HOM05D006104 ORTHO05D008303 5.4e-128 461.8 397 64.2
BolC1t05884H Brassica oleracea HOM05D006104 ORTHO05D008303 1.2e-127 460.7 421 59.4
Eucgr.J01650 Eucalyptus grandis HOM05D006104 ORTHO05D008303 1.2e-127 460.7 295 79.0
Phvul.006G083500 Phaseolus vulgaris HOM05D006104 ORTHO05D008303 1.6e-127 460.3 432 59.7
CDE04G1404 Ceratophyllum demersum HOM05D006104 ORTHO05D008303 6.0e-127 458.4 346 67.6
unitig_748.g7253 Utricularia gibba HOM05D006104 ORTHO05D008303 6.0e-127 458.4 384 64.8
Nn4g25028 Nelumbo nucifera HOM05D006104 ORTHO05D008303 7.8e-127 458.0 402 61.9
VMungo0540G0919 Vigna mungo HOM05D006104 ORTHO05D008303 1.7e-126 456.8 409 61.1
Zm00001eb044830 Zea mays HOM05D006104 ORTHO05D008303 2.3e-126 456.4 367 65.4
Medtr3g063240 Medicago truncatula HOM05D006104 ORTHO05D008303 2.5e-125 453.0 317 72.6
Aqoxy3G04351 Aquilegia oxysepala HOM05D006104 ORTHO05D008303 3.3e-125 452.6 347 67.4
ATR0124G053 Amborella trichopoda HOM05D006104 ORTHO05D008303 1.3e-124 450.7 345 67.0
AT3G02690 Arabidopsis thaliana HOM05D006104 ORTHO05D008303 1.3e-124 450.7 417 59.7
GSVIVG01033198001 Vitis vinifera HOM05D006104 ORTHO05D008303 1.6e-124 450.3 280 80.0
FAN08G3450 Fragaria x ananassa HOM05D006104 ORTHO05D008303 2.1e-124 449.9 501 52.5
Medtr3g063250 Medicago truncatula HOM05D006104 ORTHO05D008303 8.1e-124 448.0 415 60.5
Lj4A249G56 Lonicera japonica HOM05D006104 ORTHO05D008303 4.0e-123 445.7 292 80.1
Lalb_Chr18g0053941 Lupinus albus HOM05D006104 ORTHO05D008303 1.7e-121 440.3 358 64.8
Gohir.A12G053200 Gossypium hirsutum HOM05D006104 ORTHO05D008303 4.9e-121 438.7 380 63.4
HPP92_022205 Vanilla planifolia HOM05D006104 ORTHO05D008303 8.4e-121 438.0 342 66.7
AagrBONN_evm.TU.Sc2ySwM_368.1984 Anthoceros agrestis HOM05D006104 ORTHO05D008303 1.9e-120 436.8 350 65.4
Sc09g0004650 Simmondsia chinensis HOM05D006104 ORTHO05D008303 4.8e-116 422.2 311 69.5
MELO3C025108.2 Cucumis melo HOM05D006104 ORTHO05D008303 4.0e-115 419.1 495 49.7
BNapus_Darmor_BZH_scaffold_99p00200 Brassica napus HOM05D006104 ORTHO05D008303 3.0e-110 402.9 261 76.6
Pp3c19_6070 Physcomitrium patens HOM05D006104 ORTHO05D008303 1.5e-109 400.6 388 54.6
SMO364G0667 Selaginella moellendorffii HOM05D006104 ORTHO05D008303 7.6e-106 388.3 366 57.7
vmacro20444 Vaccinium macrocarpon HOM05D006104 ORTHO05D008303 3.8e-105 386.0 405 56.3
Mapoly0068s0059 Marchantia polymorpha HOM05D006104 ORTHO05D008303 8.4e-105 384.8 453 50.8
FAN04G1807 Fragaria x ananassa HOM05D006104 ORTHO05D008303 1.9e-104 383.6 521 46.1
EL10Ac4g08870 Beta vulgaris HOM05D006104 ORTHO05D008303 3.2e-104 382.9 242 78.9
CSS0044834 Camellia sinensis var. sinensis HOM05D006104 ORTHO05D008303 1.9e-101 373.6 292 67.1
Hma1.2p1_0085F.1_g043890 Hydrangea macrophylla HOM05D006104 ORTHO05D008303 7.4e-101 371.7 311 65.3
MCO16G393 Micromonas commoda HOM05D006104 ORTHO05D008303 3.7e-100 369.4 352 55.7
CBR_g22386 Chara braunii HOM05D006104 ORTHO05D008303 4.1e-99 365.9 408 51.5
Manes.01G125800 Manihot esculenta HOM05D006104 ORTHO05D008303 1.2e-87 327.8 305 59.7
Prupe.8G267800 Prunus persica HOM05D006104 ORTHO05D008303 2.0e-85 320.5 240 66.2
COL.COLO4_13439 Corchorus olitorius HOM05D006104 ORTHO05D008303 6.3e-84 315.5 271 62.7
CsaV3_5G024350 Cucumis sativus L. HOM05D006104 ORTHO05D008303 1.4e-83 314.3 312 57.1
Sed0008277 Sechium edule HOM05D006104 ORTHO05D008303 2.2e-81 307.0 232 68.5
Cre12.g507950 Chlamydomonas reinhardtii HOM05D006104 ORTHO05D008303 5.0e-81 305.8 392 48.5
Pp3c7_24690 Physcomitrium patens HOM05D006104 ORTHO05D008303 2.5e-80 303.5 305 49.2
PRCOL_00000403 Prasinoderma coloniale HOM05D006104 ORTHO05D008303 1.2e-79 301.2 294 56.8
SEGI_11411 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 7.4e-77 292.0 336 51.5
TPR.G37386 Trifolium pratense HOM05D006104 ORTHO05D008303 5.3e-75 285.8 203 71.9
QL02p056562 Quercus lobata HOM05D006104 ORTHO05D008303 7.5e-69 265.4 157 81.5
Os10g0493900 Oryza sativa ssp. japonica HOM05D006104 ORTHO05D008303 9.1e-67 258.5 158 78.5
SEGI_16808 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 1.3e-60 238.0 155 74.8
arahy.Tifrunner.gnm1.ann1.4P08NV Arachis hypogaea HOM05D006104 ORTHO05D008303 1.6e-58 231.1 204 63.7
TPR.G14061 Trifolium pratense HOM05D006104 ORTHO05D008303 3.3e-56 223.4 214 62.1
Psat5g144680 Pisum sativum HOM05D006104 ORTHO05D008303 1.0e-41 175.3 215 51.6
arahy.Tifrunner.gnm1.ann1.2Q0DPQ Arachis hypogaea HOM05D006104 ORTHO05D008303 2.0e-29 134.4 108 65.7
BraA02t04668Z Brassica rapa HOM05D006104 ORTHO05D008303 6.4e-28 129.4 135 54.1
arahy.Tifrunner.gnm1.ann1.LG1UYC Arachis hypogaea HOM05D006104 ORTHO05D008303 1.1e-27 128.6 108 63.0
Psat5g144720 Pisum sativum HOM05D006104 ORTHO05D008303 7.3e-24 115.9 106 57.5
Psat0s2701g0160 Pisum sativum HOM05D006104 ORTHO05D000113 5.2e-22 109.8 88 65.9
arahy.Tifrunner.gnm1.ann1.12AD17 Arachis hypogaea HOM05D000052 ORTHO05D000046 6.8e-22 109.4 61 83.6
Cpa.g.c43318 Carica papaya HOM05D006104 ORTHO05D117575 1.5e-16 91.7 254 29.5
Psat7g173760 Pisum sativum HOM05D006104 ORTHO05D008303 1.9e-16 91.3 70 64.3
Psat5g203840 Pisum sativum HOM05D006104 ORTHO05D324349 2.4e-14 84.3 156 44.2
Psat4g208480 Pisum sativum HOM05D006104 ORTHO05D008303 6.0e-10 69.7 35 91.4
Pp3s42_60 Physcomitrium patens HOM05D000182 ORTHO05D011688 3.0e-09 67.4 263 26.2
Psat4g208520 Pisum sativum HOM05D006104 ORTHO05D008303 3.3e-08 63.9 77 50.6
Psat4g208440 Pisum sativum HOM05D006104 ORTHO05D008303 6.9e-06 56.2 32 84.4


User provided reference genes

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