Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01192 Erythranthe guttata HOM05D000519 ORTHO05D000959 6.1e-61 237.3 117 100.0
Migut.O00215 Erythranthe guttata HOM05D000519 ORTHO05D000959 5.4e-25 117.9 109 54.1
Migut.N01370 Erythranthe guttata HOM05D000519 ORTHO05D000959 7.5e-19 97.4 98 49.0
Migut.N00721 Erythranthe guttata HOM05D000519 ORTHO05D000959 1.0e-15 87.0 109 42.2
Migut.I00156 Erythranthe guttata HOM05D000519 ORTHO05D000959 5.6e-14 81.3 95 47.4
Migut.O00213 Erythranthe guttata HOM05D000519 ORTHO05D000959 3.6e-13 78.6 88 48.9
Migut.I00372 Erythranthe guttata HOM05D000519 ORTHO05D000959 1.4e-12 76.6 81 45.7
Migut.M01410 Erythranthe guttata HOM05D000519 ORTHO05D000959 7.5e-11 70.9 83 43.4
MSTRG.7159 Avicennia marina HOM05D000519 ORTHO05D000959 2.9e-10 68.9 94 42.6
Migut.M01408 Erythranthe guttata HOM05D000519 ORTHO05D000959 4.9e-10 68.2 95 42.1
Sc17g0007820 Simmondsia chinensis HOM05D000519 ORTHO05D000959 6.4e-10 67.8 93 39.8
Medtr2g026040 Medicago truncatula HOM05D000519 ORTHO05D000959 8.3e-10 67.4 99 40.4
AL4G28250 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 1.4e-09 66.6 87 39.1
Sc24g0000290 Simmondsia chinensis HOM05D000519 ORTHO05D000959 1.9e-09 66.2 87 37.9
TPR.G35897 Trifolium pratense HOM05D000519 ORTHO05D000959 1.9e-09 66.2 87 42.5
Cfa000088 Carpinus fangiana HOM05D000519 ORTHO05D000959 2.4e-09 65.9 94 39.4
Thhalv10001076m.g Eutrema salsugineum HOM05D000519 ORTHO05D000959 2.4e-09 65.9 97 36.1
Ca_21040_v3 Cicer arietinum L. HOM05D000519 ORTHO05D000959 4.1e-09 65.1 97 38.1
Psat7g244200 Pisum sativum HOM05D000519 ORTHO05D000959 4.1e-09 65.1 97 40.2
BcaB01g03103 Brassica carinata HOM05D000519 ORTHO05D000959 5.4e-09 64.7 77 40.3
Haze_06945 Corylus avellana HOM05D000519 ORTHO05D000959 5.4e-09 64.7 116 34.5
Oeu009405.1 Olea europaea HOM05D000519 ORTHO05D000959 5.4e-09 64.7 97 38.1
BcaC04g21616 Brassica carinata HOM05D000519 ORTHO05D000959 7.1e-09 64.3 100 37.0
C09p29840 Brassica napus HOM05D000519 ORTHO05D000959 7.1e-09 64.3 100 37.0
BolC9t55847H Brassica oleracea HOM05D000519 ORTHO05D000959 7.1e-09 64.3 100 37.0
SGA_v2.0_scaffold16G07679 Striga asiatica HOM05D000519 ORTHO05D000959 7.1e-09 64.3 94 38.3
AUR62012807 Chenopodium quinoa HOM05D000519 ORTHO05D000959 9.2e-09 63.9 98 38.8
DCAR_002225 Daucus carota HOM05D000519 ORTHO05D000959 9.2e-09 63.9 86 40.7
Sp2g12280 Schrenkiella parvula HOM05D000519 ORTHO05D000959 9.2e-09 63.9 97 36.1
Carub.0008s0023 Capsella rubella HOM05D000519 ORTHO05D000959 1.2e-08 63.5 93 39.8
Gohir.A06G153900 Gossypium hirsutum HOM05D000519 ORTHO05D000959 1.6e-08 63.2 98 39.8
SalBow8G3278 Salvia bowleyana HOM05D000519 ORTHO05D000959 1.6e-08 63.2 96 38.5
Sopen11g007140 Solanum pennellii HOM05D000519 ORTHO05D000959 2.1e-08 62.8 97 36.1
TPR.G30458 Trifolium pratense HOM05D000519 ORTHO05D000959 2.1e-08 62.8 101 35.6
Aa31LG2G12610 Aethionema arabicum HOM05D000519 ORTHO05D000959 2.7e-08 62.4 93 39.8
EL10Ac8g20214 Beta vulgaris HOM05D000519 ORTHO05D000959 2.7e-08 62.4 94 39.4
A09p23090 Brassica napus HOM05D000519 ORTHO05D000959 2.7e-08 62.4 100 36.0
BraA09t37913Z Brassica rapa HOM05D000519 ORTHO05D000959 2.7e-08 62.4 100 36.0
BcaB05g24554 Brassica carinata HOM05D000519 ORTHO05D026768 3.5e-08 62.0 82 39.0
BcaB07g30771 Brassica carinata HOM05D000519 ORTHO05D000959 3.5e-08 62.0 90 36.7
BcaC07g37991 Brassica carinata HOM05D000519 ORTHO05D000959 3.5e-08 62.0 93 40.9
BolC8t48374H Brassica oleracea HOM05D000519 ORTHO05D000959 3.5e-08 62.0 93 40.9
CiPaw.09G103500 Carya illinoinensis HOM05D000519 ORTHO05D000959 3.5e-08 62.0 98 35.7
Sed0023459 Sechium edule HOM05D000519 ORTHO05D000959 3.5e-08 62.0 104 37.5
Cfa019521 Carpinus fangiana HOM05D000519 ORTHO05D000959 4.6e-08 61.6 96 36.5
BcaC06g31374 Brassica carinata HOM05D000519 ORTHO05D000959 6.0e-08 61.2 97 36.1
C07p31200 Brassica napus HOM05D000519 ORTHO05D000959 6.0e-08 61.2 97 35.1
Carub.0004s1417 Capsella rubella HOM05D000519 ORTHO05D000959 6.0e-08 61.2 87 35.6
Migut.M01409 Erythranthe guttata HOM05D000519 ORTHO05D000959 6.0e-08 61.2 81 39.5
Solyc11g012385.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 6.0e-08 61.2 97 36.1
BolC7t43661H Brassica oleracea HOM05D000519 ORTHO05D000959 7.8e-08 60.8 97 35.1
CAN.G1263.20 Capsicum annuum HOM05D000519 ORTHO05D000959 7.8e-08 60.8 94 41.5
Haze_09252 Corylus avellana HOM05D000519 ORTHO05D000959 7.8e-08 60.8 87 37.9
Nn3g21163 Nelumbo nucifera HOM05D000519 ORTHO05D000959 7.8e-08 60.8 93 37.6
AT5G47550 Arabidopsis thaliana HOM05D000519 ORTHO05D000959 1.3e-07 60.1 83 38.6
Ca_00730_v3 Cicer arietinum L. HOM05D000519 ORTHO05D000959 1.3e-07 60.1 99 35.4
Thhalv10017424m.g Eutrema salsugineum HOM05D000519 ORTHO05D000959 1.3e-07 60.1 87 32.2
Hma1.2p1_0657F.1_g197050 Hydrangea macrophylla HOM05D000519 ORTHO05D000959 1.3e-07 60.1 85 41.2
Nn3g21162 Nelumbo nucifera HOM05D000519 ORTHO05D000959 1.3e-07 60.1 93 37.6
RcHm_v2.0_Chr3g0455001 Rosa chinensis HOM05D000519 ORTHO05D000959 1.3e-07 60.1 94 38.3
SalBow8G0930 Salvia bowleyana HOM05D000519 ORTHO05D000959 1.7e-07 59.7 80 40.0
Aa31sc118G120 Aethionema arabicum HOM05D000519 ORTHO05D000959 2.3e-07 59.3 104 35.6
BcaC06g34241 Brassica carinata HOM05D000519 ORTHO05D000959 2.3e-07 59.3 97 34.0
AUR62021846 Chenopodium quinoa HOM05D000519 ORTHO05D000959 2.3e-07 59.3 98 37.8
Medtr4g017620 Medicago truncatula HOM05D000519 ORTHO05D000959 2.3e-07 59.3 83 38.6
Nn1g07421 Nelumbo nucifera HOM05D000519 ORTHO05D000959 2.3e-07 59.3 100 35.0
Peaxi162Scf00924g00034 Petunia axillaris HOM05D000519 ORTHO05D000959 2.3e-07 59.3 100 36.0
A08p12510 Brassica napus HOM05D000519 ORTHO05D000959 3.0e-07 58.9 93 38.7
BraA08t33241Z Brassica rapa HOM05D000519 ORTHO05D000959 3.0e-07 58.9 93 38.7
Peaxi162Scf00924g00023 Petunia axillaris HOM05D000519 ORTHO05D000959 3.0e-07 58.9 88 39.8
Peaxi162Scf00924g00031 Petunia axillaris HOM05D000519 ORTHO05D000959 3.0e-07 58.9 88 39.8
Peaxi162Scf00924g00035 Petunia axillaris HOM05D000519 ORTHO05D000959 3.0e-07 58.9 88 39.8
Peaxi162Scf00924g00032 Petunia axillaris HOM05D000519 ORTHO05D000959 3.9e-07 58.5 88 39.8
Aa31LG2G12570 Aethionema arabicum HOM05D000519 ORTHO05D019510 5.1e-07 58.2 98 34.7
BcaB07g30638 Brassica carinata HOM05D000519 ORTHO05D000959 5.1e-07 58.2 114 35.1
BcaC03g16971 Brassica carinata HOM05D000519 ORTHO05D000959 5.1e-07 58.2 98 31.6
BcaC04g21429 Brassica carinata HOM05D000519 ORTHO05D000959 5.1e-07 58.2 91 33.0
C09p31910 Brassica napus HOM05D000519 ORTHO05D000959 5.1e-07 58.2 91 33.0
BolC9t56041H Brassica oleracea HOM05D000519 ORTHO05D000959 5.1e-07 58.2 91 33.0
Duzib192G0996 Durio zibethinus HOM05D000519 ORTHO05D000959 5.1e-07 58.2 81 38.3
HanXRQChr04g0096501 Helianthus annuus HOM05D000519 ORTHO05D000959 5.1e-07 58.2 87 39.1
Lalb_Chr18g0057041 Lupinus albus HOM05D000519 ORTHO05D000959 5.1e-07 58.2 82 40.2
MD12G1006000 Malus domestica HOM05D000519 ORTHO05D000959 5.1e-07 58.2 94 37.2
TWI59G0838 Tripterygium wilfordii HOM05D000519 ORTHO05D000959 5.1e-07 58.2 81 34.6
A09p24850 Brassica napus HOM05D000519 ORTHO05D000959 6.6e-07 57.8 100 32.0
BraA09t38071Z Brassica rapa HOM05D000519 ORTHO05D000959 6.6e-07 57.8 97 32.0
BolC2t10969H Brassica oleracea HOM05D000519 ORTHO05D000959 8.6e-07 57.4 87 34.5
Ciclev10003705m.g Citrus clementina HOM05D000519 ORTHO05D000959 8.6e-07 57.4 81 39.5
RcHm_v2.0_Chr5g0001051 Rosa chinensis HOM05D000519 ORTHO05D000959 8.6e-07 57.4 84 38.1
Ah.09g234140 Amaranthus hybridus HOM05D000519 ORTHO05D000959 1.1e-06 57.0 81 38.3
AL8G10420 Arabidopsis lyrata HOM05D000519 ORTHO05D000959 1.1e-06 57.0 83 34.9
A06p44980 Brassica napus HOM05D000519 ORTHO05D000959 1.1e-06 57.0 97 32.0
A09p24860 Brassica napus HOM05D000519 ORTHO05D000959 1.1e-06 57.0 97 32.0
BraA06t27369Z Brassica rapa HOM05D000519 ORTHO05D000959 1.1e-06 57.0 97 32.0
Migut.N01371 Erythranthe guttata HOM05D000519 ORTHO05D000959 1.1e-06 57.0 89 33.7
Gohir.D06G160700 Gossypium hirsutum HOM05D000519 ORTHO05D000959 1.1e-06 57.0 88 37.5
Gorai.010G187500 Gossypium raimondii HOM05D000519 ORTHO05D000959 1.1e-06 57.0 88 37.5
Lalb_Chr15g0088031 Lupinus albus HOM05D000519 ORTHO05D000959 1.1e-06 57.0 93 35.5
GSVIVG01003320001 Vitis vinifera HOM05D000519 ORTHO05D000959 1.1e-06 57.0 85 35.3
CARHR126700 Cardamine hirsuta HOM05D000519 ORTHO05D000959 1.5e-06 56.6 89 36.0
COL.COLO4_31900 Corchorus olitorius HOM05D000919 ORTHO05D001187 1.5e-06 56.6 81 35.8
MELO3C025557.2 Cucumis melo HOM05D000519 ORTHO05D000959 1.5e-06 56.6 101 34.7
Gohir.A06G154000 Gossypium hirsutum HOM05D000519 ORTHO05D000959 1.5e-06 56.6 88 37.5
Sp7g15050 Schrenkiella parvula HOM05D000519 ORTHO05D000959 1.5e-06 56.6 93 35.5
PGSC0003DMG402023603 Solanum tuberosum HOM05D000519 ORTHO05D000959 1.5e-06 56.6 89 39.3
CANSAT56G2160 Cannabis sativa HOM05D000519 ORTHO05D000959 1.9e-06 56.2 78 35.9
CAN.G696.24 Capsicum annuum HOM05D000519 ORTHO05D000959 1.9e-06 56.2 94 37.2
CAN.G696.25 Capsicum annuum HOM05D000519 ORTHO05D000959 1.9e-06 56.2 94 37.2
Glyma.07G266000 Glycine max HOM05D000519 ORTHO05D000959 1.9e-06 56.2 95 32.6
Oeu047064.1 Olea europaea HOM05D000519 ORTHO05D000959 1.9e-06 56.2 95 34.7
Solyc04g014790.1 Solanum lycopersicum HOM05D000519 ORTHO05D000959 1.9e-06 56.2 88 40.9
Sopen04g006920 Solanum pennellii HOM05D000519 ORTHO05D000959 1.9e-06 56.2 88 40.9
VMungo0540G0061 Vigna mungo HOM05D000519 ORTHO05D000959 1.9e-06 56.2 96 33.3
C09p31850 Brassica napus HOM05D000519 ORTHO05D000959 2.5e-06 55.8 97 32.0
CAN.G370.1 Capsicum annuum HOM05D000519 ORTHO05D000959 2.5e-06 55.8 95 38.9
Dinv13973 Davidia involucrata HOM05D000519 ORTHO05D000959 2.5e-06 55.8 86 36.0
Lsat_1_v5_gn_1_114780 Lactuca sativa HOM05D000519 ORTHO05D000959 2.5e-06 55.8 96 37.5
Nitab4.5_0001735g0110 Nicotiana tabacum HOM05D000519 ORTHO05D000959 2.5e-06 55.8 97 39.2
Psat4g004160 Pisum sativum HOM05D000519 ORTHO05D000959 2.5e-06 55.8 99 34.3
RcHm_v2.0_Chr1g0361291 Rosa chinensis HOM05D000519 ORTHO05D000959 2.5e-06 55.8 107 34.6
RcHm_v2.0_Chr5g0040441 Rosa chinensis HOM05D000054 ORTHO05D000171 2.5e-06 55.8 77 39.0
Manes.09G039400 Manihot esculenta HOM05D000519 ORTHO05D000959 3.3e-06 55.5 85 37.6
Medtr4g133540 Medicago truncatula HOM05D000519 ORTHO05D000959 3.3e-06 55.5 86 36.0
Nitab4.5_0004646g0100 Nicotiana tabacum HOM05D000519 ORTHO05D000959 3.3e-06 55.5 81 34.6
BcaNung00185 Brassica carinata HOM05D000519 ORTHO05D000959 4.3e-06 55.1 79 39.2
CARHR173800 Cardamine hirsuta HOM05D000519 ORTHO05D000959 4.3e-06 55.1 84 34.5
AUR62021845 Chenopodium quinoa HOM05D000519 ORTHO05D000959 4.3e-06 55.1 98 31.6
Eucgr.E03920 Eucalyptus grandis HOM05D000519 ORTHO05D000959 4.3e-06 55.1 96 33.3
Gohir.A06G154100 Gossypium hirsutum HOM05D000519 ORTHO05D000959 4.3e-06 55.1 82 35.4
Psat4g004120 Pisum sativum HOM05D000519 ORTHO05D000959 4.3e-06 55.1 82 35.4
Ah.14g087560 Amaranthus hybridus HOM05D000519 ORTHO05D000959 5.6e-06 54.7 88 39.8
AUR62021847 Chenopodium quinoa HOM05D000519 ORTHO05D000959 7.3e-06 54.3 96 37.5
HanXRQChr04g0096521 Helianthus annuus HOM05D000519 ORTHO05D000959 7.3e-06 54.3 93 38.7
TPR.G5945 Trifolium pratense HOM05D004898 ORTHO05D005574 7.3e-06 54.3 81 35.8
CARHR126710 Cardamine hirsuta HOM05D000519 ORTHO05D000959 9.5e-06 53.9 92 35.9
AUR62012808 Chenopodium quinoa HOM05D000519 ORTHO05D000959 9.5e-06 53.9 98 30.6
PGR042G1719 Punica granatum HOM05D000519 ORTHO05D000959 9.5e-06 53.9 93 36.6
Rhsim13G0144500 Rhododendron simsii HOM05D000519 ORTHO05D000959 9.5e-06 53.9 95 34.7
HPP92_014273 Vanilla planifolia HOM05D000519 ORTHO05D000959 9.5e-06 53.9 95 38.9


User provided reference genes

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