Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01187 Erythranthe guttata HOM05D015389 ORTHO05D000394 3.4e-86 321.6 164 100.0
Migut.L00943 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.5e-81 306.2 164 96.3
Migut.O00422 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.1e-71 273.5 166 88.0
Migut.L00939 Erythranthe guttata HOM05D015389 ORTHO05D000394 9.1e-71 270.4 166 87.3
Migut.O00489 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.2e-70 270.0 166 86.7
Migut.L00950 Erythranthe guttata HOM05D015389 ORTHO05D000394 1.3e-69 266.5 166 86.7
Migut.L00951 Erythranthe guttata HOM05D015389 ORTHO05D000394 3.7e-48 195.3 97 97.9
SGA_v2.0_scaffold40G15636 Striga asiatica HOM05D015389 ORTHO05D000394 1.4e-34 150.2 144 52.8
Oeu019137.1 Olea europaea HOM05D000748 ORTHO05D000394 5.2e-26 121.7 138 41.3
SalBow1G7555 Salvia bowleyana HOM05D015389 ORTHO05D000394 4.1e-23 112.1 138 48.6
Oeu052534.1 Olea europaea HOM05D000748 ORTHO05D000394 3.0e-21 105.9 136 39.7
MD17G1240500 Malus domestica HOM05D000748 ORTHO05D000394 9.5e-20 100.9 159 35.2
MD09G1247600 Malus domestica HOM05D000748 ORTHO05D000394 8.1e-19 97.8 159 34.0
Aa31LG5G2920 Aethionema arabicum HOM05D000748 ORTHO05D000394 1.7e-16 90.1 162 35.8
Prupe.3G137700 Prunus persica HOM05D000748 ORTHO05D000394 2.2e-16 89.7 157 33.8
TAR624G1116 Trochodendron aralioides HOM05D000748 ORTHO05D000394 6.4e-16 88.2 152 33.6
AT4G03540 Arabidopsis thaliana HOM05D000748 ORTHO05D000394 1.4e-15 87.0 159 34.0
Carub.0006s3353 Capsella rubella HOM05D000748 ORTHO05D000394 2.4e-15 86.3 159 33.3
CARHR251970 Cardamine hirsuta HOM05D000748 ORTHO05D000394 2.4e-15 86.3 159 34.0
TAR629G2208 Trochodendron aralioides HOM05D000748 ORTHO05D000394 2.4e-15 86.3 160 32.5
AL6G49360 Arabidopsis lyrata HOM05D000748 ORTHO05D000394 3.2e-15 85.9 159 34.0
BcaB01g01904 Brassica carinata HOM05D000748 ORTHO05D000394 3.2e-15 85.9 159 33.3
Thhalv10029027m.g Eutrema salsugineum HOM05D000748 ORTHO05D000394 3.2e-15 85.9 159 34.0
FAN21G1875 Fragaria x ananassa HOM05D000748 ORTHO05D000394 3.2e-15 85.9 158 32.3
A09p02820 Brassica napus HOM05D000748 ORTHO05D000394 5.4e-15 85.1 159 32.7
BraA09t35923Z Brassica rapa HOM05D000748 ORTHO05D000394 5.4e-15 85.1 159 32.7
C09p02900 Brassica napus HOM05D000748 ORTHO05D000394 7.1e-15 84.7 159 32.7
BolC9t53215H Brassica oleracea HOM05D000748 ORTHO05D000394 7.1e-15 84.7 159 32.7
FAN16G1836 Fragaria x ananassa HOM05D000748 ORTHO05D000394 7.1e-15 84.7 153 32.7
Sp6g03550 Schrenkiella parvula HOM05D000748 ORTHO05D000394 7.1e-15 84.7 159 34.0
RcHm_v2.0_Chr5g0008311 Rosa chinensis HOM05D000748 ORTHO05D000394 1.6e-14 83.6 158 31.6
Cpa.g.sc34.161 Carica papaya HOM05D000748 ORTHO05D000394 2.7e-14 82.8 157 29.9
FvH4_3g09260 Fragaria vesca HOM05D000748 ORTHO05D000394 3.5e-14 82.4 153 31.4
EL10Ac8g20380 Beta vulgaris HOM05D000748 ORTHO05D000394 4.6e-14 82.0 154 29.9
QL08p038716 Quercus lobata HOM05D000748 ORTHO05D000394 4.6e-14 82.0 160 31.2
Haze_13159 Corylus avellana HOM05D000748 ORTHO05D000394 6.0e-14 81.6 157 31.8
CANSAT80G2769 Cannabis sativa HOM05D000748 ORTHO05D000394 7.8e-14 81.3 157 31.8
CARHR003030 Cardamine hirsuta HOM05D000748 ORTHO05D000394 7.8e-14 81.3 155 35.5
Actinidia07583 Actinidia chinensis HOM05D000748 ORTHO05D000394 1.0e-13 80.9 151 31.8
Thhalv10009824m.g Eutrema salsugineum HOM05D000748 ORTHO05D000394 1.0e-13 80.9 155 35.5
Sc21g0002840 Simmondsia chinensis HOM05D000748 ORTHO05D000394 1.0e-13 80.9 157 31.8
AL1G13190 Arabidopsis lyrata HOM05D000748 ORTHO05D000394 1.3e-13 80.5 155 35.5
AT1G03700 Arabidopsis thaliana HOM05D000748 ORTHO05D000394 1.3e-13 80.5 155 35.5
Carub.0001s0280 Capsella rubella HOM05D000748 ORTHO05D000394 1.7e-13 80.1 155 35.5
MBI07_g32534_MAGBIO Magnolia biondii HOM05D000748 ORTHO05D000394 1.7e-13 80.1 161 32.3
Sed0012708 Sechium edule HOM05D000748 ORTHO05D000394 1.7e-13 80.1 158 31.6
BcaB02g06910 Brassica carinata HOM05D000748 ORTHO05D000394 2.3e-13 79.7 155 34.8
A10p02200 Brassica napus HOM05D000748 ORTHO05D000394 2.3e-13 79.7 155 34.8
Cfa014614 Carpinus fangiana HOM05D000748 ORTHO05D000394 2.3e-13 79.7 157 31.8
ClCG07G002920 Citrullus lanatus HOM05D000748 ORTHO05D000394 2.3e-13 79.7 158 31.0
Prupe.4G046800 Prunus persica HOM05D000748 ORTHO05D000394 2.3e-13 79.7 157 31.2
Sp1g02580 Schrenkiella parvula HOM05D000748 ORTHO05D000394 2.3e-13 79.7 155 34.8
BolC5t28984H Brassica oleracea HOM05D000748 ORTHO05D000394 3.0e-13 79.3 155 34.8
Duzib235G0591 Durio zibethinus HOM05D000748 ORTHO05D000394 6.6e-13 78.2 154 29.9
THA.LOC104815961 Tarenaya hassleriana HOM05D000748 ORTHO05D000394 6.6e-13 78.2 159 28.9
Dinv23641 Davidia involucrata HOM05D000748 ORTHO05D000394 8.7e-13 77.8 157 29.9
Manes.16G027200 Manihot esculenta HOM05D000748 ORTHO05D000394 8.7e-13 77.8 154 31.8
Gorai.006G240300 Gossypium raimondii HOM05D000748 ORTHO05D000394 1.1e-12 77.4 158 32.9
Manes.12G089370 Manihot esculenta HOM05D000748 ORTHO05D000394 1.1e-12 77.4 157 29.3
Phvul.011G114000 Phaseolus vulgaris HOM05D000748 ORTHO05D000394 1.1e-12 77.4 155 30.3
CsaV3_7G004420 Cucumis sativus L. HOM05D000748 ORTHO05D000394 1.5e-12 77.0 157 29.9
Lalb_Chr03g0029451 Lupinus albus HOM05D000748 ORTHO05D000394 2.5e-12 76.3 152 29.6
MELO3C018737.2 Cucumis melo HOM05D000748 ORTHO05D000394 3.3e-12 75.9 157 29.3
Rhsim06G0142200 Rhododendron simsii HOM05D000748 ORTHO05D000394 3.3e-12 75.9 160 31.2
Medtr0004s0210 Medicago truncatula HOM05D000748 ORTHO05D000394 4.3e-12 75.5 152 28.9
Hund21225 Selenicereus undatus HOM05D000748 ORTHO05D000394 4.3e-12 75.5 150 30.0
Thecc.06G188200 Theobroma cacao HOM05D000748 ORTHO05D000394 4.3e-12 75.5 150 30.0
TWI63G0527 Tripterygium wilfordii HOM05D000748 ORTHO05D000394 4.3e-12 75.5 156 31.4
Gohir.D09G219300 Gossypium hirsutum HOM05D000748 ORTHO05D000394 5.6e-12 75.1 157 32.5
COL.COLO4_31477 Corchorus olitorius HOM05D003185 ORTHO05D009915 7.3e-12 74.7 154 29.9
FAN11G2697 Fragaria x ananassa HOM05D000748 ORTHO05D000394 7.3e-12 74.7 141 31.2
Gohir.A09G216900 Gossypium hirsutum HOM05D000748 ORTHO05D000394 7.3e-12 74.7 157 32.5
QL04p021564 Quercus lobata HOM05D000748 ORTHO05D000394 9.6e-12 74.3 159 28.9
Aa31LG1G21000 Aethionema arabicum HOM05D000748 ORTHO05D000394 1.2e-11 73.9 153 31.4
MD10G1295200 Malus domestica HOM05D000748 ORTHO05D000394 1.2e-11 73.9 153 30.1
Nn1g04081 Nelumbo nucifera HOM05D000748 ORTHO05D000394 1.2e-11 73.9 153 29.4
TPR.G24161 Trifolium pratense HOM05D000748 ORTHO05D000394 1.2e-11 73.9 98 36.7
CSS0009741 Camellia sinensis var. sinensis HOM05D000748 ORTHO05D000394 1.6e-11 73.6 158 32.3
MD05G1313000 Malus domestica HOM05D000748 ORTHO05D000394 1.6e-11 73.6 153 30.7
Hma1.2p1_0126F.1_g059420 Hydrangea macrophylla HOM05D000748 ORTHO05D000394 2.1e-11 73.2 145 30.3
SGA_v2.0_scaffold159G37643 Striga asiatica HOM05D000748 ORTHO05D000394 2.1e-11 73.2 159 28.9
Hma1.2p1_0785F.1_g217550 Hydrangea macrophylla HOM05D000748 ORTHO05D000394 2.8e-11 72.8 127 31.5
TPR.G27502 Trifolium pratense HOM05D000748 ORTHO05D000394 2.8e-11 72.8 119 31.1
vmacro12302 Vaccinium macrocarpon HOM05D000748 ORTHO05D000394 2.8e-11 72.8 156 30.8
Glyma.06G292900 Glycine max HOM05D000748 ORTHO05D000394 3.6e-11 72.4 152 28.9
Glyma.12G113100 Glycine max HOM05D000748 ORTHO05D000394 3.6e-11 72.4 152 28.9
VMungo0251G0082 Vigna mungo HOM05D000748 ORTHO05D000394 6.2e-11 71.6 149 29.5
BraA10t42488Z Brassica rapa HOM05D000748 ORTHO05D000394 8.1e-11 71.2 166 32.5
Dinv40554 Davidia involucrata HOM05D000748 ORTHO05D000394 8.1e-11 71.2 151 29.1
Lj1A1206T66 Lonicera japonica HOM05D000748 ORTHO05D000394 8.1e-11 71.2 150 29.3
Sabra13G0111200 Salix brachista HOM05D000748 ORTHO05D000394 8.1e-11 71.2 166 30.1
Sc12g0003060 Simmondsia chinensis HOM05D000748 ORTHO05D000394 1.1e-10 70.9 160 30.0
Duzib106G1717 Durio zibethinus HOM05D000748 ORTHO05D000394 1.4e-10 70.5 158 28.5
Lj3g0007355 Lotus japonicus HOM05D000748 ORTHO05D000394 1.4e-10 70.5 152 28.3
Solyc08g048315.1 Solanum lycopersicum HOM05D000748 ORTHO05D000394 1.8e-10 70.1 108 30.6
Actinidia11035 Actinidia chinensis HOM05D000748 ORTHO05D000394 2.4e-10 69.7 110 32.7
MBI07_g12790_MAGBIO Magnolia biondii HOM05D000748 ORTHO05D000394 2.4e-10 69.7 145 29.0
CANSAT35G1994 Cannabis sativa HOM05D000748 ORTHO05D000394 3.1e-10 69.3 155 25.8
Atru.chr10.1886 Acer truncatum HOM05D000748 ORTHO05D000394 4.0e-10 68.9 152 30.3
CiPaw.03G177000 Carya illinoinensis HOM05D000748 ORTHO05D000394 4.0e-10 68.9 158 30.4
Eucgr.K01023 Eucalyptus grandis HOM05D000748 ORTHO05D000394 4.0e-10 68.9 151 27.2
Os05g0245300 Oryza sativa ssp. japonica HOM05D000748 ORTHO05D000394 4.0e-10 68.9 117 28.2
QL05p040228 Quercus lobata HOM05D000748 ORTHO05D000394 4.0e-10 68.9 150 29.3
VMungo1127G0579 Vigna mungo HOM05D000748 ORTHO05D000394 4.0e-10 68.9 152 27.6
Thecc.02G179400 Theobroma cacao HOM05D000748 ORTHO05D000394 5.2e-10 68.6 157 27.4
vmacro15905 Vaccinium macrocarpon HOM05D000748 ORTHO05D000394 6.9e-10 68.2 160 28.8
Aqoxy1G02433 Aquilegia oxysepala HOM05D000748 ORTHO05D000394 9.0e-10 67.8 156 30.1
COL.COLO4_30183 Corchorus olitorius HOM05D000748 ORTHO05D000394 9.0e-10 67.8 161 28.0
Glyma.14G196000 Glycine max HOM05D000748 ORTHO05D000394 1.5e-09 67.0 152 27.0
Psat7g189720 Pisum sativum HOM05D000748 ORTHO05D000394 1.5e-09 67.0 158 27.8
GSVIVG01020544001 Vitis vinifera HOM05D000748 ORTHO05D000394 2.0e-09 66.6 144 29.9
Gohir.A05G161800 Gossypium hirsutum HOM05D000748 ORTHO05D000394 2.6e-09 66.2 150 28.7
Rhsim02G0129000 Rhododendron simsii HOM05D000748 ORTHO05D000394 2.6e-09 66.2 151 29.8
AUR62017014 Chenopodium quinoa HOM05D000748 ORTHO05D000394 3.4e-09 65.9 145 24.8
MBI07_g32647_MAGBIO Magnolia biondii HOM05D000748 ORTHO05D000394 3.4e-09 65.9 108 28.7
Phvul.002G234000 Phaseolus vulgaris HOM05D000748 ORTHO05D000394 3.4e-09 65.9 149 28.9
Lj4g0017866 Lotus japonicus HOM05D000748 ORTHO05D000394 4.4e-09 65.5 146 28.1
Thecc.09G087200 Theobroma cacao HOM05D000748 ORTHO05D000394 4.4e-09 65.5 153 25.5
CiPaw.10G048100 Carya illinoinensis HOM05D000748 ORTHO05D000394 5.8e-09 65.1 149 28.2
PGR004G1146 Punica granatum HOM05D000748 ORTHO05D000394 7.6e-09 64.7 149 26.8
HPP92_003877 Vanilla planifolia HOM05D000748 ORTHO05D000394 7.6e-09 64.7 151 27.8
Migut.H01488 Erythranthe guttata HOM05D000748 ORTHO05D000394 1.3e-08 63.9 158 25.9
Oeu053972.1 Olea europaea HOM05D000748 ORTHO05D000394 1.7e-08 63.5 159 27.0
HPP92_003887 Vanilla planifolia HOM05D000748 ORTHO05D000394 1.7e-08 63.5 151 27.2
Peaxi162Scf00530g00117 Petunia axillaris HOM05D000748 ORTHO05D000394 2.2e-08 63.2 160 28.1
Potri.019G100300 Populus trichocarpa HOM05D000748 ORTHO05D000394 2.9e-08 62.8 160 26.9
Cc02_g13330 Coffea canephora HOM05D000748 ORTHO05D000394 3.8e-08 62.4 155 25.8
DCAR_028069 Daucus carota HOM05D000748 ORTHO05D000394 3.8e-08 62.4 151 27.8
Dinv26417 Davidia involucrata HOM05D000748 ORTHO05D000394 3.8e-08 62.4 123 32.5
Potri.013G131700 Populus trichocarpa HOM05D000748 ORTHO05D000394 3.8e-08 62.4 163 27.0
PGR142G2985 Punica granatum HOM05D000748 ORTHO05D000394 3.8e-08 62.4 156 25.6
AUR62014819 Chenopodium quinoa HOM05D000748 ORTHO05D000394 6.4e-08 61.6 118 24.6
Glyma.07G196300 Glycine max HOM05D000748 ORTHO05D000394 6.4e-08 61.6 157 28.0
Lsat_1_v5_gn_7_21240 Lactuca sativa HOM05D000748 ORTHO05D000394 6.4e-08 61.6 147 30.6
Peaxi162Scf00661g00521 Petunia axillaris HOM05D000748 ORTHO05D000394 8.4e-08 61.2 159 25.2
Sopen02g023110 Solanum pennellii HOM05D000748 ORTHO05D000394 1.9e-07 60.1 159 24.5
Nn1g06561 Nelumbo nucifera HOM05D000748 ORTHO05D000394 3.2e-07 59.3 146 29.5
PGSC0003DMG400029690 Solanum tuberosum HOM05D000748 ORTHO05D000394 3.2e-07 59.3 159 24.5
Nitab4.5_0010762g0030 Nicotiana tabacum HOM05D000748 ORTHO05D000394 5.4e-07 58.5 159 24.5
Sabra19G0110700 Salix brachista HOM05D000748 ORTHO05D000394 7.1e-07 58.2 158 25.9
Sabra19G0112100 Salix brachista HOM05D000748 ORTHO05D000394 7.1e-07 58.2 158 25.9
Nitab4.5_0003432g0060 Nicotiana tabacum HOM05D000748 ORTHO05D000394 1.2e-06 57.4 159 24.5
Migut.M01144 Erythranthe guttata HOM05D000748 ORTHO05D000394 2.7e-06 56.2 151 25.8
SalBow8G0734 Salvia bowleyana HOM05D003185 ORTHO05D009915 4.6e-06 55.5 132 26.5
HanXRQChr04g0124291 Helianthus annuus HOM05D000748 ORTHO05D000394 6.0e-06 55.1 147 29.3


User provided reference genes

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