Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 8.9e-162 573.5 291 100.0
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 7.4e-124 447.6 294 77.6
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 1.5e-116 423.3 289 75.1
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 4.1e-114 415.2 310 69.4
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 1.2e-113 413.7 293 72.7
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 1.0e-109 400.6 313 66.8
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 4.3e-108 395.2 294 66.0
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 2.2e-107 392.9 294 66.3
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 6.3e-107 391.3 292 65.1
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 1.4e-106 390.2 293 64.8
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 3.1e-106 389.0 291 66.0
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 3.1e-106 389.0 293 64.5
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 6.9e-106 387.9 295 66.8
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 6.9e-106 387.9 295 67.1
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 9.1e-106 387.5 291 65.6
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 1.5e-105 386.7 289 66.8
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 2.0e-105 386.3 294 64.6
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 2.6e-105 386.0 294 64.3
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 5.9e-105 384.8 298 64.1
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 1.7e-104 383.3 292 65.1
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 2.2e-104 382.9 296 63.9
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 2.9e-104 382.5 296 63.9
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 2.9e-104 382.5 294 63.3
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 3.8e-104 382.1 291 64.9
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 8.5e-104 380.9 294 63.9
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 8.5e-104 380.9 294 65.3
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 1.9e-103 379.8 296 63.2
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 2.5e-103 379.4 294 64.3
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 2.5e-103 379.4 291 63.6
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 2.5e-103 379.4 294 64.3
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 4.2e-103 378.6 294 66.3
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 5.5e-103 378.3 291 63.2
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 2.1e-102 376.3 291 66.0
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 2.1e-102 376.3 295 63.4
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 2.3e-101 372.9 296 62.5
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 3.0e-101 372.5 293 64.2
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 1.5e-100 370.2 297 64.0
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 2.6e-100 369.4 293 63.8
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 2.6e-100 369.4 292 64.4
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 5.7e-100 368.2 293 63.5
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 5.7e-100 368.2 294 61.6
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 6.3e-99 364.8 295 61.7
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 8.2e-99 364.4 296 60.8
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 8.2e-99 364.4 293 63.1
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 1.1e-98 364.0 297 60.9
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 1.1e-98 364.0 297 60.9
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 1.5e-97 360.1 298 64.8
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 2.9e-96 355.9 300 60.3
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 2.9e-96 355.9 292 59.9
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 3.8e-96 355.5 312 58.3
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 8.5e-96 354.4 297 60.6
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 7.2e-95 351.3 294 59.9
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 3.6e-94 349.0 292 60.6
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 1.4e-93 347.1 296 57.4
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 1.8e-93 346.7 275 65.1
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 3.9e-93 345.5 298 62.1
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 2.0e-92 343.2 291 60.1
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.0e-92 343.2 320 57.5
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 2.0e-92 343.2 288 58.7
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 5.7e-92 341.7 292 57.9
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 7.4e-92 341.3 293 57.3
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 3.7e-91 339.0 294 58.8
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 8.2e-91 337.8 297 58.6
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 2.4e-90 336.3 261 64.8
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 5.3e-90 335.1 290 57.6
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 2.6e-89 332.8 294 57.1
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 1.7e-88 330.1 300 59.3
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 2.2e-88 329.7 293 57.3
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 9.4e-87 324.3 260 62.3
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 3.0e-85 319.3 269 59.9
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 3.0e-85 319.3 362 48.1
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 1.5e-84 317.0 293 54.3
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 2.0e-84 316.6 258 62.0
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 3.3e-84 315.8 329 51.4
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 7.5e-84 314.7 295 53.6
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 2.8e-83 312.8 294 55.1
CSS0025117 Camellia sinensis var. sinensis HOM05D006242 ORTHO05D007936 5.9e-81 305.1 238 62.6
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 5.0e-80 302.0 292 52.7
Lsat_1_v5_gn_6_96480 Lactuca sativa HOM05D006242 ORTHO05D007936 3.2e-79 299.3 230 67.0
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 2.7e-78 296.2 307 52.8
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 8.0e-78 294.7 263 55.5
HanXRQChr12g0369481 Helianthus annuus HOM05D006242 ORTHO05D007936 1.7e-75 287.0 236 61.4
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 2.8e-75 286.2 258 55.4
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 8.3e-75 284.6 202 68.8
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 1.2e-73 280.8 232 64.2
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 8.6e-72 274.6 284 51.8
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 1.1e-71 274.2 291 47.8
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 1.6e-70 270.4 202 66.3
CiPaw.09G074600 Carya illinoinensis HOM05D006242 ORTHO05D007936 3.6e-70 269.2 209 63.2
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 7.5e-68 261.5 201 63.7
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 7.5e-68 261.5 304 43.4
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 3.2e-66 256.1 291 45.4
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 3.2e-66 256.1 294 45.6
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 2.9e-64 249.6 286 48.3
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 1.1e-63 247.7 258 50.8
CARHR129200 Cardamine hirsuta HOM05D006242 ORTHO05D007936 2.6e-60 236.5 201 59.2
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 9.8e-60 234.6 291 46.7
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 2.2e-59 233.4 176 63.6
TAR624G0344 Trochodendron aralioides HOM05D006242 ORTHO05D007936 1.4e-53 214.2 184 57.6
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 2.2e-51 206.8 208 51.9
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 7.1e-50 201.8 190 59.5
ATR1094G001 Amborella trichopoda HOM05D006242 ORTHO05D007936 4.6e-49 199.1 200 50.5
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 3.0e-48 196.4 174 55.7
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 6.2e-46 188.7 222 43.2
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 2.0e-44 183.7 185 52.4
unitig_37.g12020 Utricularia gibba HOM05D006242 ORTHO05D007936 4.4e-44 182.6 130 66.2
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 2.6e-36 156.8 328 31.7
SGA_v2.0_scaffold4G02502 Striga asiatica HOM05D006242 ORTHO05D007936 2.2e-35 153.7 96 81.2
HPP92_011011 Vanilla planifolia HOM05D006242 ORTHO05D007936 4.2e-34 149.4 138 57.2
Hma1.2p1_1700F.1_g298200 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 4.3e-31 139.4 97 72.2
GSVIVG01006138001 Vitis vinifera HOM05D006242 ORTHO05D007936 2.8e-30 136.7 96 69.8
Cc09_g05630 Coffea canephora HOM05D006242 ORTHO05D007936 2.0e-28 130.6 145 49.7
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 1.7e-27 127.5 123 53.7
Aqoxy1G01391 Aquilegia oxysepala HOM05D006242 ORTHO05D007936 2.2e-27 127.1 95 67.4
Hund15670 Selenicereus undatus HOM05D006242 ORTHO05D007936 2.2e-27 127.1 99 63.6
HPP92_011012 Vanilla planifolia HOM05D006242 ORTHO05D007936 9.3e-26 121.7 119 52.9
AUR62037908 Chenopodium quinoa HOM05D006242 ORTHO05D007936 4.6e-25 119.4 108 58.3
MCO04G402 Micromonas commoda HOM05D006242 ORTHO05D007936 3.9e-24 116.3 171 39.2
Phvul.007G242466 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 8.1e-22 108.6 107 51.4
BcaB02g09486 Brassica carinata HOM05D006242 ORTHO05D007936 5.8e-20 102.4 101 52.5
ATR1094G019 Amborella trichopoda HOM05D006242 ORTHO05D007936 9.9e-20 101.7 82 58.5
Cc09_g05640 Coffea canephora HOM05D006242 ORTHO05D007936 1.7e-19 100.9 69 72.5
TPR.G22035 Trifolium pratense HOM05D006242 ORTHO05D007936 2.9e-19 100.1 81 60.5
VMungo0720G2601 Vigna mungo HOM05D006242 ORTHO05D007936 5.4e-18 95.9 93 52.7
Cc09_g05720 Coffea canephora HOM05D006242 ORTHO05D007936 9.3e-18 95.1 96 57.3
Cfa025972 Carpinus fangiana HOM05D006242 ORTHO05D007936 3.0e-16 90.1 214 30.4
AUR62040161 Chenopodium quinoa HOM05D006242 ORTHO05D007936 3.0e-16 90.1 95 48.4
Cc09_g05710 Coffea canephora HOM05D006242 ORTHO05D007936 1.3e-11 74.7 59 62.7
SHI14613 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-11 74.7 56 58.9
CiPaw.09G216300 Carya illinoinensis HOM05D006242 ORTHO05D007936 2.9e-11 73.6 96 44.8
Os02g0173000 Oryza sativa ssp. japonica HOM05D006242 ORTHO05D007936 3.2e-10 70.1 53 64.2
Hund15669 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.1e-08 62.8 71 46.5


User provided reference genes

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