Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 1.5e-118 429.5 210 100.0
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 9.8e-86 320.5 212 75.0
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 2.2e-85 319.3 208 74.0
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 2.1e-80 302.8 208 69.2
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.1e-75 286.2 210 64.8
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 2.7e-75 285.8 208 62.5
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 2.3e-74 282.7 208 63.5
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 3.0e-74 282.3 209 63.6
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 5.1e-74 281.6 208 65.4
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 6.6e-74 281.2 208 64.4
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 1.9e-73 279.6 208 63.5
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 3.3e-73 278.9 208 63.0
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 5.6e-73 278.1 208 62.0
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 7.3e-73 277.7 208 62.0
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 9.5e-73 277.3 209 61.2
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 9.5e-73 277.3 208 64.9
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 1.2e-72 276.9 208 62.5
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 2.1e-72 276.2 208 62.0
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 2.8e-72 275.8 208 61.5
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.6e-72 275.4 208 62.0
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 4.7e-72 275.0 208 62.0
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 6.2e-72 274.6 208 61.5
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 1.4e-71 273.5 207 59.4
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 1.8e-71 273.1 209 62.2
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 2.3e-71 272.7 208 62.5
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 8.9e-71 270.8 208 61.1
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 1.2e-70 270.4 208 62.0
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 2.6e-70 269.2 210 62.4
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 2.6e-70 269.2 210 60.5
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 2.6e-70 269.2 208 59.6
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 4.4e-70 268.5 209 59.8
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 4.4e-70 268.5 208 58.7
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 7.5e-70 267.7 210 61.9
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 1.7e-69 266.5 208 58.7
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 3.2e-68 262.3 213 55.9
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 4.1e-68 261.9 211 56.9
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 9.2e-68 260.8 208 59.1
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 1.2e-67 260.4 208 57.2
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 1.2e-67 260.4 210 58.6
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 2.1e-67 259.6 208 58.7
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 2.7e-67 259.2 208 56.7
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 1.0e-66 257.3 208 55.3
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 2.3e-66 256.1 208 56.7
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 1.9e-65 253.1 210 56.2
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 2.5e-65 252.7 211 57.3
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 7.3e-65 251.1 209 55.5
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 2.1e-64 249.6 209 56.0
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 3.6e-64 248.8 209 56.5
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 1.1e-63 247.3 214 55.1
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 3.1e-63 245.7 210 54.8
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 6.8e-63 244.6 214 54.2
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 8.9e-63 244.2 210 58.1
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 1.2e-62 243.8 211 53.1
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 2.0e-62 243.0 211 55.0
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 7.6e-62 241.1 211 54.0
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 2.2e-61 239.6 187 61.5
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 4.9e-61 238.4 228 55.7
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 1.1e-60 237.3 211 53.1
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.4e-60 236.9 207 51.2
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 2.7e-59 232.6 219 52.5
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 4.6e-59 231.9 208 54.3
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.0e-58 230.7 210 51.9
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 6.6e-58 228.0 211 52.6
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 6.6e-58 228.0 211 52.1
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 3.3e-57 225.7 207 50.2
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 3.6e-56 222.2 212 49.5
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 4.0e-55 218.8 211 50.7
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 2.0e-54 216.5 208 51.9
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 5.8e-54 214.9 220 50.5
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 2.9e-53 212.6 206 50.5
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 3.8e-53 212.2 207 44.9
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 8.4e-53 211.1 183 55.7
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 4.2e-52 208.8 170 62.4
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 1.2e-51 207.2 211 48.3
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 3.5e-51 205.7 194 49.5
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 3.9e-50 202.2 206 50.5
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 9.6e-49 197.6 220 45.9
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 5.3e-47 191.8 207 44.9
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 3.4e-46 189.1 144 63.9
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 7.6e-46 188.0 207 43.0
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 5.6e-41 171.8 156 51.9
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 6.2e-40 168.3 152 51.3
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 1.4e-39 167.2 208 37.0
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 3.2e-36 156.0 127 57.5
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 7.9e-35 151.4 120 59.2
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 1.8e-31 140.2 96 66.7
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 5.3e-31 138.7 170 44.1
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 1.5e-22 110.5 77 62.3
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 1.5e-14 84.0 162 30.2
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 3.4e-14 82.8 78 43.6
SEGI_23668 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 1.4e-07 60.8 196 26.5


User provided reference genes

Program Settings