Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 1.5e-175 619.4 306 100.0
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 2.1e-113 412.9 299 71.9
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 3.5e-108 395.6 307 67.1
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 5.6e-106 388.3 284 69.4
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 1.6e-105 386.7 284 69.7
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 3.6e-105 385.6 315 63.8
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 4.7e-105 385.2 294 67.3
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 1.8e-104 383.3 306 65.7
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 4.0e-104 382.1 280 70.4
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 5.2e-104 381.7 286 68.5
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 4.4e-103 378.6 297 62.6
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 6.4e-102 374.8 301 65.1
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 4.9e-94 348.6 302 60.3
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 6.4e-94 348.2 277 64.3
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 5.1e-91 338.6 300 60.0
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 6.6e-91 338.2 297 63.6
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 5.6e-90 335.1 280 60.4
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 1.6e-89 333.6 291 60.8
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 2.4e-88 329.7 283 61.1
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 1.7e-86 323.6 305 53.4
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 2.2e-86 323.2 281 59.8
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 4.6e-84 315.5 317 54.9
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 4.6e-84 315.5 277 59.6
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 2.3e-83 313.2 284 59.9
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 8.7e-83 311.2 278 58.3
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 1.5e-82 310.5 289 57.8
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 2.5e-82 309.7 280 59.3
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 2.5e-82 309.7 276 59.1
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 5.6e-82 308.5 292 58.2
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 2.1e-81 306.6 291 58.4
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 3.6e-81 305.8 289 57.8
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 6.2e-81 305.1 282 57.4
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 8.1e-81 304.7 282 58.5
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 1.8e-80 303.5 282 57.4
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 1.8e-80 303.5 279 59.1
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 4.0e-80 302.4 288 58.0
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 6.9e-80 301.6 300 55.3
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 1.2e-79 300.8 286 58.4
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 2.0e-79 300.1 286 56.3
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 5.8e-79 298.5 282 57.8
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 7.6e-79 298.1 296 54.4
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 1.3e-78 297.4 287 58.5
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 2.2e-78 296.6 282 56.4
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 2.4e-77 293.1 279 57.0
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 2.4e-77 293.1 285 56.1
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 7.1e-77 291.6 306 54.6
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 1.2e-76 290.8 281 56.9
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 1.2e-76 290.8 285 56.8
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 1.2e-76 290.8 289 54.7
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.6e-76 290.4 279 56.6
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 3.9e-75 285.8 278 56.1
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.9e-74 283.5 278 54.7
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 1.3e-73 280.8 277 53.8
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 2.1e-73 280.0 297 53.5
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 2.1e-73 280.0 286 52.1
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 1.0e-70 271.2 298 52.0
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 2.5e-69 266.5 287 51.6
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 7.9e-68 261.5 268 57.1
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 7.4e-66 255.0 278 50.4
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 4.8e-65 252.3 211 59.7
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 1.5e-63 247.3 294 49.3
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.7e-54 217.2 225 54.2
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 2.2e-54 216.9 278 47.8
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 2.2e-46 190.3 163 60.7
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 8.5e-46 188.3 151 63.6
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 3.8e-38 162.9 135 61.5
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 8.8e-35 151.8 119 66.4
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 1.1e-32 144.8 184 48.9
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 7.7e-23 112.1 309 31.4
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 6.5e-22 109.0 305 36.4
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 4.7e-20 102.8 121 48.8
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 1.2e-18 98.2 83 62.7
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 1.6e-12 77.8 103 47.6
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 6.3e-09 65.9 56 62.5


User provided reference genes

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