Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 2.0e-147 525.8 279 100.0
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 2.5e-92 342.8 260 73.1
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 3.3e-89 332.4 242 72.3
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 2.8e-88 329.3 240 70.4
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 3.4e-86 322.4 235 69.8
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 4.2e-84 315.5 235 69.8
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 7.2e-84 314.7 229 70.7
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 9.3e-84 314.3 238 71.0
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 1.2e-83 313.9 237 67.5
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 1.2e-83 313.9 236 69.9
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 3.6e-83 312.4 237 70.5
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 1.0e-82 310.8 211 73.5
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 1.8e-82 310.1 242 66.9
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 3.9e-82 308.9 252 65.5
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 5.1e-82 308.5 240 68.3
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 6.7e-82 308.1 231 71.0
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 1.1e-81 307.4 243 66.7
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 1.5e-81 307.0 240 68.3
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 1.9e-81 306.6 239 64.9
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 3.3e-81 305.8 250 66.0
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 3.3e-81 305.8 235 68.5
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 4.3e-81 305.4 237 68.8
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 4.3e-81 305.4 234 67.1
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 7.4e-81 304.7 243 67.5
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 7.4e-81 304.7 240 67.9
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 2.2e-80 303.1 246 65.4
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 2.8e-80 302.8 232 67.2
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 2.8e-80 302.8 232 67.2
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 2.8e-80 302.8 248 64.9
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 3.7e-80 302.4 244 65.2
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 4.8e-80 302.0 252 64.3
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 4.8e-80 302.0 241 66.4
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 8.2e-80 301.2 232 67.7
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 1.1e-79 300.8 240 64.2
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 1.1e-79 300.8 227 70.9
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 1.4e-79 300.4 247 64.0
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 1.8e-79 300.1 247 65.2
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 2.4e-79 299.7 246 64.2
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 2.4e-79 299.7 229 68.1
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 2.4e-79 299.7 241 65.6
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 2.4e-79 299.7 246 65.4
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 3.1e-79 299.3 231 69.3
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 4.1e-79 298.9 251 65.7
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 6.9e-79 298.1 259 62.9
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 9.1e-79 297.7 233 68.2
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 1.2e-78 297.4 234 66.2
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 1.2e-78 297.4 243 64.6
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 1.5e-78 297.0 241 63.1
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 2.0e-78 296.6 237 65.4
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 2.0e-78 296.6 249 63.5
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 3.4e-78 295.8 237 66.2
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 3.4e-78 295.8 237 66.2
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 4.5e-78 295.4 233 67.4
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 4.5e-78 295.4 231 68.4
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 5.9e-78 295.0 233 66.5
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 7.7e-78 294.7 246 64.2
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 1.0e-77 294.3 235 67.2
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 1.3e-77 293.9 235 66.4
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 2.2e-77 293.1 238 67.2
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 2.9e-77 292.7 235 66.4
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 3.8e-77 292.4 245 64.5
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 5.0e-77 292.0 235 66.4
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 6.5e-77 291.6 235 66.0
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 8.5e-77 291.2 233 63.9
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 8.5e-77 291.2 238 68.1
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 8.5e-77 291.2 247 63.2
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 1.9e-76 290.0 233 66.1
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 2.5e-76 289.7 233 67.0
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 4.2e-76 288.9 235 66.0
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 5.5e-76 288.5 231 64.5
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 2.7e-75 286.2 231 64.9
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 3.6e-75 285.8 231 64.9
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 4.6e-75 285.4 229 65.9
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 7.9e-75 284.6 231 64.1
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 1.0e-74 284.3 242 62.0
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 1.4e-74 283.9 245 63.3
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 1.4e-74 283.9 242 62.0
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 1.4e-74 283.9 241 60.6
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 1.4e-74 283.9 239 62.8
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 1.4e-74 283.9 231 64.9
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 1.8e-74 283.5 225 64.4
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 3.0e-74 282.7 236 63.6
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 8.8e-74 281.2 236 62.7
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 1.1e-73 280.8 237 63.3
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 1.3e-72 277.3 232 61.2
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 2.8e-72 276.2 251 58.6
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 2.8e-72 276.2 251 58.6
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 3.7e-72 275.8 232 62.5
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 6.3e-72 275.0 234 62.8
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 4.1e-71 272.3 224 62.5
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 3.4e-70 269.2 200 69.0
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 1.3e-69 267.3 243 60.1
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 7.2e-68 261.5 239 59.4
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 4.4e-65 252.3 227 61.2
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 8.2e-64 248.1 393 42.0
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 1.0e-61 241.1 202 61.9
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 8.5e-61 238.0 196 61.7
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 1.6e-59 233.8 219 57.1
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 4.0e-58 229.2 211 52.6
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 8.2e-56 221.5 202 56.9
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 7.0e-55 218.4 239 55.2
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 6.5e-53 211.8 222 55.4
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 3.2e-44 183.0 140 67.1
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 7.2e-44 181.8 133 70.7
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 4.7e-43 179.1 245 41.6
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 2.0e-38 163.7 98 77.6
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 4.3e-36 156.0 92 80.4
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 1.9e-28 130.6 105 60.0
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 6.2e-19 99.0 231 32.5
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 7.5e-17 92.0 73 72.6
PRCOL_00001953 Prasinoderma coloniale HOM05D005243 ORTHO05D006670 3.2e-07 60.1 153 31.4


User provided reference genes

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