Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01109 Erythranthe guttata HOM05D008046 ORTHO05D004477 3.7e-83 311.6 170 100.0
SalBow5G1479 Salvia bowleyana HOM05D008046 ORTHO05D004477 4.6e-25 118.6 167 50.9
Migut.H02240 Erythranthe guttata HOM05D008046 ORTHO05D004477 6.2e-14 81.6 149 47.7
SGA_v2.0_scaffold115G32090 Striga asiatica HOM05D010872 ORTHO05D004477 2.4e-13 79.7 129 46.5
MSTRG.3689 Avicennia marina HOM05D008046 ORTHO05D004477 3.1e-13 79.3 167 39.5
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 4.5e-12 75.5 170 40.0
SGA_v2.0_scaffold45G17135 Striga asiatica HOM05D010872 ORTHO05D004477 7.6e-12 74.7 167 37.7
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 6.4e-11 71.6 153 41.2
unitig_32.g11784 Utricularia gibba HOM05D008046 ORTHO05D004477 1.1e-10 70.9 138 41.3
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.9e-10 70.1 153 40.5
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 9.3e-10 67.8 160 35.6
Carub.0001s3286 Capsella rubella HOM05D010872 ORTHO05D013672 1.6e-09 67.0 142 38.7
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 3.5e-09 65.9 172 36.0
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 6.0e-09 65.1 148 39.2
TWI36G0888 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 3.0e-08 62.8 137 35.8
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 6.7e-08 61.6 169 36.1
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 6.7e-08 61.6 159 37.1
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 8.7e-08 61.2 152 38.8
TPR.G24247 Trifolium pratense HOM05D008046 ORTHO05D004477 1.5e-07 60.5 169 34.3
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 1.5e-07 60.5 161 35.4
AT1G35210 Arabidopsis thaliana HOM05D010872 ORTHO05D013672 1.9e-07 60.1 148 35.8
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.5e-07 59.7 149 35.6
CARHR287280 Cardamine hirsuta HOM05D010872 ORTHO05D013672 2.5e-07 59.7 131 43.5
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 2.5e-07 59.7 162 37.0
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 2.5e-07 59.7 162 37.0
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 5.6e-07 58.5 161 36.0
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 5.6e-07 58.5 152 37.5
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 5.6e-07 58.5 162 33.3
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 5.6e-07 58.5 155 36.8
RcHm_v2.0_Chr7g0242321 Rosa chinensis HOM05D018381 ORTHO05D004477 5.6e-07 58.5 160 40.0
AL1G49920 Arabidopsis lyrata HOM05D010872 ORTHO05D013672 7.4e-07 58.2 123 39.8
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 9.6e-07 57.8 142 40.8
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 9.6e-07 57.8 131 37.4
PGR031G3049 Punica granatum HOM05D008046 ORTHO05D004477 9.6e-07 57.8 159 36.5
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 9.6e-07 57.8 170 34.7
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 1.3e-06 57.4 159 34.6
BcaC05g27742 Brassica carinata HOM05D010872 ORTHO05D013672 2.1e-06 56.6 130 38.5
C05p37280 Brassica napus HOM05D010872 ORTHO05D013672 2.1e-06 56.6 130 38.5
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 2.1e-06 56.6 173 33.5
DCAR_019289 Daucus carota HOM05D008046 ORTHO05D004477 2.8e-06 56.2 164 35.4
FAN04G3140 Fragaria x ananassa HOM05D018381 ORTHO05D004477 3.7e-06 55.8 174 33.3
FAN13G0458 Fragaria x ananassa HOM05D018381 ORTHO05D004477 3.7e-06 55.8 174 33.3
Eucgr.B00040 Eucalyptus grandis HOM05D008046 ORTHO05D004477 4.8e-06 55.5 180 32.8
Thhalv10001870m.g Eutrema salsugineum HOM05D010872 ORTHO05D013672 4.8e-06 55.5 118 44.1
FAN08G1425 Fragaria x ananassa HOM05D018381 ORTHO05D004477 4.8e-06 55.5 174 32.8
Gohir.A05G265833 Gossypium hirsutum HOM05D008046 ORTHO05D004477 4.8e-06 55.5 142 35.2
Psat7g056440 Pisum sativum HOM05D008176 ORTHO05D004477 4.8e-06 55.5 155 32.9
THA.LOC104800226 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 4.8e-06 55.5 80 46.2
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 6.2e-06 55.1 166 32.5
Sp1g19950 Schrenkiella parvula HOM05D009138 ORTHO05D011294 6.2e-06 55.1 84 39.3
BcaB03g13666 Brassica carinata HOM05D010872 ORTHO05D013672 8.1e-06 54.7 121 38.0


User provided reference genes

Program Settings