Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01074 Erythranthe guttata HOM05D005869 ORTHO05D007229 4.5e-100 367.9 177 100.0
Migut.K01077 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.2e-81 306.6 160 92.5
Oeu044507.2 Olea europaea HOM05D005869 ORTHO05D007229 2.6e-63 245.7 173 69.9
GSVIVG01004938001 Vitis vinifera HOM05D005869 ORTHO05D007229 3.7e-62 241.9 156 74.4
Potri.003G163800 Populus trichocarpa HOM05D005869 ORTHO05D007229 1.1e-61 240.4 160 71.9
Hma1.2p1_1834F.1_g304595 Hydrangea macrophylla HOM05D005869 ORTHO05D007229 7.1e-61 237.7 159 72.3
Duzib052G0289 Durio zibethinus HOM05D005869 ORTHO05D007229 1.6e-60 236.5 159 69.2
Thecc.02G194400 Theobroma cacao HOM05D005869 ORTHO05D007229 2.7e-60 235.7 159 70.4
Cc11_g15130 Coffea canephora HOM05D005869 ORTHO05D007229 7.8e-60 234.2 159 69.8
Duzib132G0160 Durio zibethinus HOM05D005869 ORTHO05D007229 2.3e-59 232.6 159 69.8
Potri.001G066000 Populus trichocarpa HOM05D005869 ORTHO05D007229 3.0e-59 232.3 160 69.4
Gohir.D02G175000 Gossypium hirsutum HOM05D005869 ORTHO05D007229 1.1e-58 230.3 159 69.2
Gorai.005G196600 Gossypium raimondii HOM05D005869 ORTHO05D007229 1.1e-58 230.3 159 69.2
TAR622G0237 Trochodendron aralioides HOM05D005869 ORTHO05D007229 1.5e-58 229.9 140 77.9
Gohir.A03G152800 Gossypium hirsutum HOM05D005869 ORTHO05D007229 5.6e-58 228.0 159 68.6
Cpa.g.sc498.3 Carica papaya HOM05D005869 ORTHO05D007229 7.3e-58 227.6 160 68.8
Actinidia09599 Actinidia chinensis HOM05D005869 ORTHO05D007229 9.5e-58 227.3 159 69.8
Sabra01G0045900 Salix brachista HOM05D005869 ORTHO05D007229 9.5e-58 227.3 165 67.9
MSTRG.8047 Avicennia marina HOM05D005869 ORTHO05D007229 2.8e-57 225.7 165 67.9
Ciclev10032244m.g Citrus clementina HOM05D005869 ORTHO05D007229 2.8e-57 225.7 159 69.8
Solyc12g041880.2 Solanum lycopersicum HOM05D005869 ORTHO05D007229 4.7e-57 224.9 166 66.3
AL1G41620 Arabidopsis lyrata HOM05D005869 ORTHO05D007229 1.1e-56 223.8 140 73.6
CSS0039203 Camellia sinensis var. sinensis HOM05D005869 ORTHO05D007229 1.4e-56 223.4 160 68.8
Carub.0001s2653 Capsella rubella HOM05D005869 ORTHO05D007229 2.3e-56 222.6 140 73.6
Sopen12g020650 Solanum pennellii HOM05D005869 ORTHO05D007229 2.3e-56 222.6 166 65.7
AT1G28100 Arabidopsis thaliana HOM05D005869 ORTHO05D007229 6.8e-56 221.1 164 64.6
BcaC06g35333 Brassica carinata HOM05D005869 ORTHO05D007229 1.2e-55 220.3 184 58.7
Nitab4.5_0002899g0010 Nicotiana tabacum HOM05D005869 ORTHO05D007229 1.2e-55 220.3 168 64.3
PGSC0003DMG400014477 Solanum tuberosum HOM05D005869 ORTHO05D007229 1.5e-55 219.9 169 65.1
BcaB03g13954 Brassica carinata HOM05D005869 ORTHO05D007229 2.6e-55 219.2 140 72.1
Manes.08G102300 Manihot esculenta HOM05D005869 ORTHO05D007229 2.6e-55 219.2 160 67.5
Manes.09G187100 Manihot esculenta HOM05D005869 ORTHO05D007229 2.6e-55 219.2 159 67.3
Glyma.13G264200 Glycine max HOM05D005869 ORTHO05D007229 9.9e-55 217.2 159 64.8
THA.LOC104820535 Tarenaya hassleriana HOM05D005869 ORTHO05D007229 1.3e-54 216.9 161 66.5
Sp1g24290 Schrenkiella parvula HOM05D005869 ORTHO05D007229 1.7e-54 216.5 181 58.0
CARHR027570 Cardamine hirsuta HOM05D005869 ORTHO05D007229 2.2e-54 216.1 160 64.4
Thhalv10008411m.g Eutrema salsugineum HOM05D005869 ORTHO05D007229 2.2e-54 216.1 160 65.0
Atru.chr11.2424 Acer truncatum HOM05D005869 ORTHO05D007229 2.9e-54 215.7 148 70.3
PSO478G4440 Papaver somniferum HOM05D005869 ORTHO05D007229 4.9e-54 214.9 159 66.0
Rhsim12G0098100 Rhododendron simsii HOM05D005869 ORTHO05D007229 6.4e-54 214.5 169 66.9
Aqoxy5G03171 Aquilegia oxysepala HOM05D005869 ORTHO05D007229 1.4e-53 213.4 159 65.4
BcaB07g32415 Brassica carinata HOM05D005869 ORTHO05D007229 1.4e-53 213.4 140 69.3
Lj3g0004461 Lotus japonicus HOM05D005869 ORTHO05D007229 1.4e-53 213.4 139 69.8
Nn4g22166 Nelumbo nucifera HOM05D005869 ORTHO05D007229 2.4e-53 212.6 159 66.7
A07p11480 Brassica napus HOM05D005869 ORTHO05D007229 3.2e-53 212.2 193 56.0
PSO017G3988 Papaver somniferum HOM05D005869 ORTHO05D007229 7.1e-53 211.1 159 65.4
Medtr2g072940 Medicago truncatula HOM05D005869 ORTHO05D007229 9.2e-53 210.7 159 64.8
PGR102G3220 Punica granatum HOM05D005869 ORTHO05D007229 9.2e-53 210.7 164 64.0
Phvul.005G075700 Phaseolus vulgaris HOM05D005869 ORTHO05D007229 1.6e-52 209.9 159 62.9
arahy.Tifrunner.gnm1.ann1.3C70LE Arachis hypogaea HOM05D005869 ORTHO05D007229 2.7e-52 209.1 154 64.9
Psat1g007680 Pisum sativum HOM05D005869 ORTHO05D007229 2.7e-52 209.1 164 63.4
TWI36G0175 Tripterygium wilfordii HOM05D005869 ORTHO05D007229 2.7e-52 209.1 142 70.4
arahy.Tifrunner.gnm1.ann1.WRPQ8T Arachis hypogaea HOM05D005869 ORTHO05D007229 3.5e-52 208.8 154 64.9
TPR.G35001 Trifolium pratense HOM05D005869 ORTHO05D007229 7.8e-52 207.6 159 62.9
C07p17290 Brassica napus HOM05D005869 ORTHO05D007229 1.0e-51 207.2 184 56.5
Prupe.1G217100 Prunus persica HOM05D005869 ORTHO05D007229 1.3e-51 206.8 160 61.9
CiPaw.05G102600 Carya illinoinensis HOM05D005869 ORTHO05D007229 3.9e-51 205.3 179 58.7
QL03p049767 Quercus lobata HOM05D005869 ORTHO05D007229 3.9e-51 205.3 162 63.0
Sabra03G0119100 Salix brachista HOM05D005869 ORTHO05D007229 3.9e-51 205.3 165 64.2
BraA07t28937Z Brassica rapa HOM05D005869 ORTHO05D007229 6.6e-51 204.5 202 53.5
HanXRQChr08g0210441 Helianthus annuus HOM05D005869 ORTHO05D007229 8.6e-51 204.1 170 61.2
RcHm_v2.0_Chr4g0429061 Rosa chinensis HOM05D005869 ORTHO05D007229 8.6e-51 204.1 164 61.0
MD16G1129300 Malus domestica HOM05D005869 ORTHO05D007229 1.5e-50 203.4 155 65.2
FvH4_4g22830 Fragaria vesca HOM05D005869 ORTHO05D007229 2.5e-50 202.6 159 61.6
Sc04g0000040 Simmondsia chinensis HOM05D005869 ORTHO05D007229 2.5e-50 202.6 118 78.0
Sc04g0000100 Simmondsia chinensis HOM05D005869 ORTHO05D007229 2.5e-50 202.6 118 78.0
ECA233G2015 Erigeron canadensis HOM05D005869 ORTHO05D007229 5.6e-50 201.4 148 66.2
MD13G1129300 Malus domestica HOM05D005869 ORTHO05D007229 5.6e-50 201.4 155 63.9
Lalb_Chr25g0285611 Lupinus albus HOM05D005869 ORTHO05D007229 9.6e-50 200.7 159 61.6
ClCG07G011870 Citrullus lanatus HOM05D005869 ORTHO05D007229 1.6e-49 199.9 165 61.8
Eucgr.B03550 Eucalyptus grandis HOM05D005869 ORTHO05D007229 1.6e-49 199.9 153 64.7
BolC7t42232H Brassica oleracea HOM05D005869 ORTHO05D007229 2.1e-49 199.5 193 53.9
CsaV3_4G002340 Cucumis sativus L. HOM05D005869 ORTHO05D007229 4.7e-49 198.4 156 63.5
vmacro16076 Vaccinium macrocarpon HOM05D005869 ORTHO05D007229 6.2e-49 198.0 181 59.7
Sed0007329 Sechium edule HOM05D005869 ORTHO05D007229 8.1e-49 197.6 183 55.2
MELO3C017808.2 Cucumis melo HOM05D005869 ORTHO05D007229 1.8e-48 196.4 156 63.5
ATR0829G022 Amborella trichopoda HOM05D005869 ORTHO05D007229 5.2e-48 194.9 162 63.0
Peaxi162Scf00128g01773 Petunia axillaris HOM05D005869 ORTHO05D007229 5.2e-48 194.9 143 64.3
EL10Ac6g13596 Beta vulgaris HOM05D005869 ORTHO05D007229 8.9e-48 194.1 137 66.4
BraA09t39308Z Brassica rapa HOM05D005869 ORTHO05D007229 2.0e-47 193.0 162 59.3
C05p26800 Brassica napus HOM05D005869 ORTHO05D007229 4.4e-47 191.8 175 55.4
A09p37960 Brassica napus HOM05D005869 ORTHO05D007229 9.9e-47 190.7 169 56.8
CDE05G0434 Ceratophyllum demersum HOM05D005869 ORTHO05D007229 1.3e-46 190.3 160 60.0
MBI11_g11870_MAGBIO Magnolia biondii HOM05D000422 ORTHO05D001248 1.7e-46 189.9 137 67.9
Sed0028093 Sechium edule HOM05D005869 ORTHO05D007229 2.4e-45 186.0 186 54.8
HanXRQChr12g0363371 Helianthus annuus HOM05D005869 ORTHO05D007229 5.4e-45 184.9 160 56.2
Migut.O00624 Erythranthe guttata HOM05D005869 ORTHO05D007229 7.1e-45 184.5 160 65.0
Ah.03g135600 Amaranthus hybridus HOM05D005869 ORTHO05D007229 1.2e-44 183.7 144 61.8
Zm00001eb044420 Zea mays HOM05D005869 ORTHO05D007229 1.2e-44 183.7 156 61.5
BcaC05g26814 Brassica carinata HOM05D005869 ORTHO05D007229 1.6e-44 183.3 142 63.4
HPP92_000723 Vanilla planifolia HOM05D005869 ORTHO05D007229 6.0e-44 181.4 148 60.1
BcaC05g26813 Brassica carinata HOM05D005869 ORTHO05D007229 5.1e-43 178.3 105 79.0
BolC5t31401H Brassica oleracea HOM05D005869 ORTHO05D007229 5.1e-43 178.3 151 59.6
SalBow2G1918 Salvia bowleyana HOM05D005869 ORTHO05D007229 1.5e-42 176.8 156 57.7
VMungo1080G1469 Vigna mungo HOM05D005869 ORTHO05D007229 1.9e-42 176.4 137 60.6
SalBow7G3994 Salvia bowleyana HOM05D005869 ORTHO05D007229 2.5e-42 176.0 156 57.7
Os10g0499600 Oryza sativa ssp. japonica HOM05D005869 ORTHO05D007229 2.8e-41 172.6 102 78.4
HanXRQChr08g0210391 Helianthus annuus HOM05D005869 ORTHO05D007229 3.4e-39 165.6 121 66.9
Mapoly0153s0008 Marchantia polymorpha HOM05D005869 ORTHO05D007229 3.4e-39 165.6 105 72.4
AagrBONN_evm.TU.Sc2ySwM_368.1764 Anthoceros agrestis HOM05D005869 ORTHO05D007229 9.9e-39 164.1 104 71.2
Pp3c14_12070 Physcomitrium patens HOM05D005869 ORTHO05D007229 1.7e-38 163.3 137 57.7
SMO115G0111 Selaginella moellendorffii HOM05D005869 ORTHO05D007229 6.4e-38 161.4 95 78.9
Cre03.g194450 Chlamydomonas reinhardtii HOM05D005869 ORTHO05D007229 3.2e-37 159.1 122 61.5
Aa31sc1106G20 Aethionema arabicum HOM05D005869 ORTHO05D007229 5.4e-37 158.3 105 74.3
Migut.K01072 Erythranthe guttata HOM05D005869 ORTHO05D007229 5.4e-37 158.3 108 66.7
Migut.K01075 Erythranthe guttata HOM05D005869 ORTHO05D007229 8.7e-35 151.0 164 48.8
CANSAT01G1948 Cannabis sativa HOM05D005869 ORTHO05D007229 3.3e-34 149.1 113 60.2
MCO09G131 Micromonas commoda HOM05D005869 ORTHO05D007229 7.3e-34 147.9 114 57.9
MSTRG.8048 Avicennia marina HOM05D005869 ORTHO05D007229 3.6e-33 145.6 151 47.7
PRCOL_00000815 Prasinoderma coloniale HOM05D005869 ORTHO05D007229 1.2e-31 140.6 109 56.0
Lj6A836G36 Lonicera japonica HOM05D005869 ORTHO05D007229 5.4e-29 131.7 160 48.8
Migut.K01076 Erythranthe guttata HOM05D005869 ORTHO05D007229 2.3e-27 126.3 102 59.8
FAN12G1770 Fragaria x ananassa HOM05D000001 ORTHO05D010470 3.9e-27 125.6 122 52.5
FAN07G2435 Fragaria x ananassa HOM05D000001 ORTHO05D010470 8.7e-27 124.4 122 51.6
FAN17G1058 Fragaria x ananassa HOM05D000001 ORTHO05D010470 1.5e-26 123.6 189 37.6
CBR_g3946 Chara braunii HOM05D005869 ORTHO05D007229 9.6e-26 120.9 113 55.8
SGA_v2.0_scaffold201G41354 Striga asiatica HOM05D005869 ORTHO05D007229 4.0e-24 115.5 195 41.5
Actinidia34002 Actinidia chinensis HOM05D005869 ORTHO05D007229 2.1e-20 103.2 58 79.3
Lsat_1_v5_gn_4_151180 Lactuca sativa HOM05D005869 ORTHO05D007229 2.3e-19 99.8 139 43.2
Hund16125 Selenicereus undatus HOM05D005869 ORTHO05D007229 4.8e-17 92.0 50 84.0
AUR62005704 Chenopodium quinoa HOM05D005869 ORTHO05D007229 4.1e-16 89.0 50 82.0
Oeu019435.1 Olea europaea HOM05D005869 ORTHO05D007229 4.5e-15 85.5 151 39.7
Glyma.12G234900 Glycine max HOM05D005869 ORTHO05D007229 8.4e-14 81.3 50 78.0
Haze_12488 Corylus avellana HOM05D005869 ORTHO05D007229 5.5e-13 78.6 171 33.3
unitig_26.g10430 Utricularia gibba HOM05D005869 ORTHO05D007229 6.7e-11 71.6 73 46.6
arahy.Tifrunner.gnm1.ann1.6GV0UE Arachis hypogaea HOM05D001662 ORTHO05D005318 5.3e-08 62.0 69 47.8
Hund16126 Selenicereus undatus HOM05D005869 ORTHO05D007229 2.6e-07 59.7 80 42.5
COL.COLO4_06414 Corchorus olitorius HOM05D005869 ORTHO05D007229 1.3e-06 57.4 71 43.7
arahy.Tifrunner.gnm1.ann1.G1CRI5 Arachis hypogaea HOM05D000992 ORTHO05D001928 5.0e-06 55.5 62 50.0
arahy.Tifrunner.gnm1.ann1.KDZ9D9 Arachis hypogaea HOM05D005557 ORTHO05D001928 6.5e-06 55.1 60 51.7


User provided reference genes

Program Settings