Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01073 Erythranthe guttata HOM05D005869 ORTHO05D007229 2.0e-56 222.2 114 100.0
Migut.K01075 Erythranthe guttata HOM05D005869 ORTHO05D007229 8.0e-50 200.3 111 92.8
MSTRG.8048 Avicennia marina HOM05D005869 ORTHO05D007229 1.4e-25 119.8 111 55.0
Dinv19137 Davidia involucrata HOM05D005869 ORTHO05D007229 1.7e-15 86.3 121 40.5
Migut.K01077 Erythranthe guttata HOM05D005869 ORTHO05D007229 6.4e-15 84.3 116 42.2
Oeu019435.1 Olea europaea HOM05D005869 ORTHO05D007229 1.1e-14 83.6 109 47.7
Oeu044507.2 Olea europaea HOM05D005869 ORTHO05D007229 1.4e-14 83.2 100 48.0
CSS0039203 Camellia sinensis var. sinensis HOM05D005869 ORTHO05D007229 2.4e-14 82.4 122 41.0
vmacro16076 Vaccinium macrocarpon HOM05D005869 ORTHO05D007229 3.2e-14 82.0 122 41.0
MD16G1129300 Malus domestica HOM05D005869 ORTHO05D007229 4.2e-14 81.6 107 44.9
Rhsim12G0098100 Rhododendron simsii HOM05D005869 ORTHO05D007229 4.2e-14 81.6 120 42.5
Hma1.2p1_1834F.1_g304595 Hydrangea macrophylla HOM05D005869 ORTHO05D007229 7.1e-14 80.9 102 42.2
Ca_03922_v3 Cicer arietinum L. HOM05D005869 ORTHO05D007229 9.3e-14 80.5 121 41.3
GSVIVG01004938001 Vitis vinifera HOM05D005869 ORTHO05D007229 2.7e-13 79.0 124 39.5
Potri.003G163800 Populus trichocarpa HOM05D005869 ORTHO05D007229 4.6e-13 78.2 110 40.9
VMungo1080G1469 Vigna mungo HOM05D005869 ORTHO05D007229 4.6e-13 78.2 112 37.5
Phvul.005G075700 Phaseolus vulgaris HOM05D005869 ORTHO05D007229 7.9e-13 77.4 111 37.8
Ciclev10032244m.g Citrus clementina HOM05D005869 ORTHO05D007229 1.0e-12 77.0 119 40.3
Actinidia09599 Actinidia chinensis HOM05D005869 ORTHO05D007229 1.3e-12 76.6 114 41.2
Eucgr.B03550 Eucalyptus grandis HOM05D005869 ORTHO05D007229 1.3e-12 76.6 121 38.8
Glyma.13G264200 Glycine max HOM05D005869 ORTHO05D007229 1.3e-12 76.6 107 37.4
PGSC0003DMG400014477 Solanum tuberosum HOM05D005869 ORTHO05D007229 1.3e-12 76.6 107 40.2
Ah.03g135600 Amaranthus hybridus HOM05D005869 ORTHO05D007229 1.8e-12 76.3 109 41.3
MD13G1129300 Malus domestica HOM05D005869 ORTHO05D007229 1.8e-12 76.3 108 45.4
Manes.08G102300 Manihot esculenta HOM05D005869 ORTHO05D007229 2.3e-12 75.9 120 36.7
EL10Ac6g13596 Beta vulgaris HOM05D005869 ORTHO05D007229 3.0e-12 75.5 114 42.1
Potri.001G066000 Populus trichocarpa HOM05D005869 ORTHO05D007229 3.0e-12 75.5 120 38.3
Sabra01G0045900 Salix brachista HOM05D005869 ORTHO05D007229 3.0e-12 75.5 123 37.4
QL03p049770 Quercus lobata HOM05D005869 ORTHO05D007229 5.1e-12 74.7 119 41.2
Solyc12g041880.2 Solanum lycopersicum HOM05D005869 ORTHO05D007229 5.1e-12 74.7 107 39.3
ATR0829G022 Amborella trichopoda HOM05D005869 ORTHO05D007229 6.7e-12 74.3 116 38.8
Prupe.1G217100 Prunus persica HOM05D005869 ORTHO05D007229 6.7e-12 74.3 101 42.6
RcHm_v2.0_Chr4g0429061 Rosa chinensis HOM05D005869 ORTHO05D007229 6.7e-12 74.3 118 39.0
Atru.chr11.2424 Acer truncatum HOM05D005869 ORTHO05D007229 8.7e-12 73.9 110 39.1
Gohir.A03G152800 Gossypium hirsutum HOM05D005869 ORTHO05D007229 8.7e-12 73.9 115 39.1
Nitab4.5_0000608g0060 Nicotiana tabacum HOM05D005869 ORTHO05D007229 8.7e-12 73.9 105 40.0
Nn4g22166 Nelumbo nucifera HOM05D005869 ORTHO05D007229 1.1e-11 73.6 116 40.5
PSO017G3988 Papaver somniferum HOM05D005869 ORTHO05D007229 1.1e-11 73.6 109 42.2
arahy.Tifrunner.gnm1.ann1.3C70LE Arachis hypogaea HOM05D005869 ORTHO05D007229 1.5e-11 73.2 99 39.4
arahy.Tifrunner.gnm1.ann1.WRPQ8T Arachis hypogaea HOM05D005869 ORTHO05D007229 1.5e-11 73.2 99 39.4
MSTRG.8047 Avicennia marina HOM05D005869 ORTHO05D007229 1.5e-11 73.2 104 41.3
PSO478G4440 Papaver somniferum HOM05D005869 ORTHO05D007229 1.5e-11 73.2 104 43.3
TPR.G35001 Trifolium pratense HOM05D005869 ORTHO05D007229 1.5e-11 73.2 109 40.4
Lj6A836G36 Lonicera japonica HOM05D005869 ORTHO05D007229 1.9e-11 72.8 106 40.6
Sopen12g020650 Solanum pennellii HOM05D005869 ORTHO05D007229 1.9e-11 72.8 107 38.3
ClCG07G011870 Citrullus lanatus HOM05D005869 ORTHO05D007229 2.5e-11 72.4 104 37.5
Duzib132G0160 Durio zibethinus HOM05D005869 ORTHO05D007229 3.3e-11 72.0 111 39.6
FvH4_4g22830 Fragaria vesca HOM05D005869 ORTHO05D007229 3.3e-11 72.0 115 40.0
Medtr2g072940 Medicago truncatula HOM05D005869 ORTHO05D007229 3.3e-11 72.0 118 35.6
Aqoxy5G03171 Aquilegia oxysepala HOM05D005869 ORTHO05D007229 4.3e-11 71.6 107 39.3
Gohir.D02G175000 Gossypium hirsutum HOM05D005869 ORTHO05D007229 4.3e-11 71.6 111 38.7
Psat1g007680 Pisum sativum HOM05D005869 ORTHO05D007229 5.6e-11 71.2 116 37.9
TWI36G0175 Tripterygium wilfordii HOM05D005869 ORTHO05D007229 5.6e-11 71.2 118 36.4
Cc11_g15130 Coffea canephora HOM05D005869 ORTHO05D007229 9.6e-11 70.5 100 38.0
Peaxi162Scf00128g01773 Petunia axillaris HOM05D005869 ORTHO05D007229 9.6e-11 70.5 108 35.2
CiPaw.05G102600 Carya illinoinensis HOM05D005869 ORTHO05D007229 2.1e-10 69.3 117 39.3
Nitab4.5_0002899g0010 Nicotiana tabacum HOM05D005869 ORTHO05D007229 2.1e-10 69.3 105 39.0
CANSAT01G1948 Cannabis sativa HOM05D005869 ORTHO05D007229 3.6e-10 68.6 105 35.2
HanXRQChr12g0363371 Helianthus annuus HOM05D005869 ORTHO05D007229 3.6e-10 68.6 119 37.0
Lalb_Chr25g0285611 Lupinus albus HOM05D005869 ORTHO05D007229 3.6e-10 68.6 107 35.5
HPP92_000723 Vanilla planifolia HOM05D005869 ORTHO05D007229 4.8e-10 68.2 114 35.1
HanXRQChr08g0210441 Helianthus annuus HOM05D005869 ORTHO05D007229 6.2e-10 67.8 111 40.5
MELO3C017808.2 Cucumis melo HOM05D005869 ORTHO05D007229 8.1e-10 67.4 103 35.9
Duzib052G0289 Durio zibethinus HOM05D005869 ORTHO05D007229 8.1e-10 67.4 108 35.2
Gorai.005G196600 Gossypium raimondii HOM05D005869 ORTHO05D007229 8.1e-10 67.4 111 37.8
CsaV3_4G002340 Cucumis sativus L. HOM05D005869 ORTHO05D007229 1.1e-09 67.0 101 37.6
COL.COLO4_06415 Corchorus olitorius HOM05D005869 ORTHO05D007229 1.4e-09 66.6 112 36.6
Lj3g0004461 Lotus japonicus HOM05D005869 ORTHO05D007229 1.8e-09 66.2 107 35.5
Thecc.02G194400 Theobroma cacao HOM05D005869 ORTHO05D007229 1.8e-09 66.2 111 36.9
PGR102G3220 Punica granatum HOM05D005869 ORTHO05D007229 2.4e-09 65.9 121 35.5
Haze_12488 Corylus avellana HOM05D005869 ORTHO05D007229 4.0e-09 65.1 108 36.1
BcaC06g35333 Brassica carinata HOM05D005869 ORTHO05D007229 5.3e-09 64.7 97 36.1
A07p11480 Brassica napus HOM05D005869 ORTHO05D007229 5.3e-09 64.7 97 36.1
C07p17290 Brassica napus HOM05D005869 ORTHO05D007229 5.3e-09 64.7 97 36.1
BolC7t42232H Brassica oleracea HOM05D005869 ORTHO05D007229 5.3e-09 64.7 97 36.1
BraA07t28937Z Brassica rapa HOM05D005869 ORTHO05D007229 5.3e-09 64.7 97 36.1
HanXRQChr08g0210391 Helianthus annuus HOM05D005869 ORTHO05D007229 5.3e-09 64.7 110 37.3
THA.LOC104820535 Tarenaya hassleriana HOM05D005869 ORTHO05D007229 6.9e-09 64.3 98 34.7
FAN17G1058 Fragaria x ananassa HOM05D000001 ORTHO05D010470 9.0e-09 63.9 98 36.7
AUR62005704 Chenopodium quinoa HOM05D005869 ORTHO05D007229 1.2e-08 63.5 108 36.1
FAN07G2435 Fragaria x ananassa HOM05D000001 ORTHO05D010470 1.2e-08 63.5 98 36.7
ECA233G2015 Erigeron canadensis HOM05D005869 ORTHO05D007229 1.5e-08 63.2 104 36.5
FAN12G1770 Fragaria x ananassa HOM05D000001 ORTHO05D010470 1.5e-08 63.2 97 39.2
Sed0007329 Sechium edule HOM05D005869 ORTHO05D007229 2.6e-08 62.4 105 34.3
SGA_v2.0_scaffold201G41354 Striga asiatica HOM05D005869 ORTHO05D007229 2.6e-08 62.4 107 36.4
Hund16126 Selenicereus undatus HOM05D005869 ORTHO05D007229 3.4e-08 62.0 113 36.3
Sc04g0000090 Simmondsia chinensis HOM05D005869 ORTHO05D007229 3.4e-08 62.0 108 37.0
TAR622G0237 Trochodendron aralioides HOM05D005869 ORTHO05D007229 3.4e-08 62.0 117 38.5
BcaB07g32415 Brassica carinata HOM05D005869 ORTHO05D007229 5.8e-08 61.2 97 32.0
CARHR027570 Cardamine hirsuta HOM05D005869 ORTHO05D007229 5.8e-08 61.2 101 35.6
BcaC05g26814 Brassica carinata HOM05D005869 ORTHO05D007229 9.9e-08 60.5 100 37.0
C05p26800 Brassica napus HOM05D005869 ORTHO05D007229 9.9e-08 60.5 100 37.0
Thhalv10008411m.g Eutrema salsugineum HOM05D005869 ORTHO05D007229 9.9e-08 60.5 97 32.0
Sp1g24290 Schrenkiella parvula HOM05D005869 ORTHO05D007229 9.9e-08 60.5 95 32.6
A09p37960 Brassica napus HOM05D005869 ORTHO05D007229 1.3e-07 60.1 99 36.4
BraA09t39308Z Brassica rapa HOM05D005869 ORTHO05D007229 1.3e-07 60.1 99 36.4
CDE05G0434 Ceratophyllum demersum HOM05D005869 ORTHO05D007229 1.3e-07 60.1 109 36.7
Sc04g0000050 Simmondsia chinensis HOM05D005869 ORTHO05D007229 1.3e-07 60.1 108 36.1
Pp3c14_12070 Physcomitrium patens HOM05D005869 ORTHO05D007229 2.9e-07 58.9 97 35.1
AT1G28100 Arabidopsis thaliana HOM05D005869 ORTHO05D007229 4.9e-07 58.2 97 29.9
Zm00001eb044420 Zea mays HOM05D005869 ORTHO05D007229 6.4e-07 57.8 101 38.6
Aa31sc1106G20 Aethionema arabicum HOM05D005869 ORTHO05D007229 8.4e-07 57.4 101 34.7
BolC5t31401H Brassica oleracea HOM05D005869 ORTHO05D007229 8.4e-07 57.4 100 36.0
Carub.0001s2653 Capsella rubella HOM05D005869 ORTHO05D007229 8.4e-07 57.4 98 33.7
AL1G41620 Arabidopsis lyrata HOM05D005869 ORTHO05D007229 4.2e-06 55.1 101 33.7
SEGI_05009 Sequoiadendron giganteum HOM05D005869 ORTHO05D007229 5.5e-06 54.7 115 32.2
AagrBONN_evm.TU.Sc2ySwM_368.1764 Anthoceros agrestis HOM05D005869 ORTHO05D007229 7.1e-06 54.3 104 30.8


User provided reference genes

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