Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 2.7e-129 465.3 229 100.0
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 2.5e-90 335.9 230 73.0
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 6.1e-89 331.3 231 70.1
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.5e-84 316.6 231 68.4
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 2.9e-83 312.4 233 67.8
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 2.7e-81 305.8 230 66.5
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 1.8e-80 303.1 231 67.5
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 9.7e-79 297.4 231 63.2
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 2.8e-78 295.8 232 62.5
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 4.8e-78 295.0 240 61.7
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 8.2e-78 294.3 233 61.4
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 1.8e-77 293.1 234 62.0
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 1.8e-77 293.1 236 63.1
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 1.2e-76 290.4 235 61.7
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 3.8e-75 285.4 234 62.0
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 6.5e-75 284.6 232 62.1
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 6.5e-75 284.6 235 61.3
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 1.9e-74 283.1 233 60.9
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 5.5e-74 281.6 230 61.3
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 7.2e-74 281.2 239 62.3
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 7.2e-74 281.2 237 61.2
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 7.2e-74 281.2 230 61.3
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 1.6e-73 280.0 242 58.3
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 1.6e-73 280.0 237 62.0
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 2.1e-73 279.6 232 61.6
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 8.0e-73 277.7 237 60.3
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 8.0e-73 277.7 238 59.7
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 1.8e-72 276.6 233 57.9
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 2.3e-72 276.2 233 57.9
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 3.3e-71 272.3 231 59.7
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 3.3e-71 272.3 235 60.0
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 4.4e-71 271.9 233 58.4
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 7.4e-71 271.2 238 59.2
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 6.3e-70 268.1 230 57.0
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 1.1e-69 267.3 214 63.1
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.6e-68 263.5 236 58.5
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 2.0e-68 263.1 236 59.3
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 3.5e-68 262.3 230 59.1
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 3.5e-68 262.3 206 63.6
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 7.7e-68 261.2 229 59.0
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 8.5e-67 257.7 231 58.9
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 2.5e-66 256.1 232 56.9
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 2.5e-66 256.1 241 56.0
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 4.2e-66 255.4 231 57.6
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 1.6e-65 253.4 241 57.7
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 1.6e-65 253.4 228 58.3
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 2.1e-65 253.1 231 58.0
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 2.7e-65 252.7 229 58.5
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 2.7e-65 252.7 227 58.6
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 2.7e-65 252.7 190 65.8
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 3.6e-65 252.3 248 57.7
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 4.7e-65 251.9 232 54.7
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 8.0e-65 251.1 234 57.3
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 1.0e-64 250.8 231 58.0
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 3.0e-64 249.2 214 59.8
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.0e-64 249.2 245 55.5
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 3.0e-64 249.2 230 58.3
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 4.0e-64 248.8 232 54.3
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 6.8e-64 248.1 225 57.8
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 1.5e-63 246.9 250 52.8
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 3.4e-63 245.7 236 56.4
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 4.4e-63 245.4 230 57.0
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 4.4e-63 245.4 232 55.2
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 7.5e-63 244.6 250 54.4
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 9.7e-63 244.2 242 55.0
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 2.8e-62 242.7 232 57.3
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 3.7e-62 242.3 230 58.3
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.1e-61 239.2 219 57.5
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 4.1e-61 238.8 278 49.6
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 7.0e-61 238.0 210 58.1
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 7.0e-61 238.0 210 58.1
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 7.0e-61 238.0 263 52.5
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 1.2e-60 237.3 199 57.3
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 5.9e-60 235.0 239 51.5
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.9e-59 232.6 184 62.0
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 3.8e-59 232.3 181 62.4
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 5.0e-59 231.9 232 54.3
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 6.5e-59 231.5 250 51.6
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 1.2e-57 227.3 233 53.2
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 1.2e-57 227.3 218 56.9
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 2.7e-57 226.1 238 50.8
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 3.4e-55 219.2 170 63.5
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 9.8e-55 217.6 237 50.6
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 3.1e-53 212.6 200 57.0
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 4.2e-50 202.2 211 51.7
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 9.5e-50 201.1 240 48.3
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 3.0e-48 196.1 166 57.2
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 2.0e-47 193.4 174 59.2
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 5.7e-47 191.8 231 49.4
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 5.4e-45 185.3 150 58.0
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 4.5e-44 182.2 179 53.6
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.3e-43 179.9 171 56.1
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 2.5e-42 176.4 211 46.0
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 4.3e-42 175.6 134 62.7
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 2.8e-41 172.9 219 44.7
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 5.2e-40 168.7 208 46.2
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 9.8e-39 164.5 190 46.3
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 1.1e-37 161.0 162 49.4
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.4e-37 160.6 149 58.4
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 3.3e-34 149.4 141 58.2
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 2.8e-33 146.4 159 50.9
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.1e-32 144.4 227 38.3
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 9.8e-31 137.9 171 42.1
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 5.6e-26 122.1 105 56.2
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 9.9e-23 111.3 140 44.3
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 3.9e-19 99.4 60 71.7
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.3e-18 95.9 81 60.5
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 7.3e-18 95.1 130 40.8
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 1.2e-15 87.8 74 60.8
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.6e-15 86.7 69 65.2
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.7e-14 84.0 178 36.5
Cre03.g180500 Chlamydomonas reinhardtii HOM05D006411 ORTHO05D007563 3.0e-11 73.2 163 29.4
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 1.1e-10 71.2 195 28.2
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.1e-10 71.2 64 54.7
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 3.3e-10 69.7 82 51.2
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 1.6e-09 67.4 153 32.7
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.6e-09 67.4 97 47.4
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.0e-07 60.5 55 54.5
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 9.9e-07 58.2 36 66.7
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 4.9e-06 55.8 35 65.7


User provided reference genes

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