Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01033 Erythranthe guttata HOM05D005538 ORTHO05D007055 4.8e-90 334.3 154 100.0
Oeu003281.1 Olea europaea HOM05D005538 ORTHO05D007055 2.2e-74 282.3 154 83.8
Hma1.2p1_0459F.1_g157240 Hydrangea macrophylla HOM05D005538 ORTHO05D007055 7.0e-73 277.3 154 82.5
Dinv06880 Davidia involucrata HOM05D005538 ORTHO05D007055 3.2e-70 268.5 150 80.0
SalBow2G1516 Salvia bowleyana HOM05D005538 ORTHO05D007055 2.1e-69 265.8 154 79.2
Peaxi162Scf00220g00119 Petunia axillaris HOM05D005538 ORTHO05D007055 1.0e-68 263.5 150 78.7
SGA_v2.0_scaffold80G25945 Striga asiatica HOM05D005538 ORTHO05D007055 1.4e-68 263.1 149 79.2
PGSC0003DMG400030010 Solanum tuberosum HOM05D005538 ORTHO05D007055 1.8e-68 262.7 151 77.5
Sopen01g005330 Solanum pennellii HOM05D005538 ORTHO05D007055 3.4e-67 258.5 151 78.1
Solyc01g009780.3 Solanum lycopersicum HOM05D005538 ORTHO05D007055 4.4e-67 258.1 151 78.1
Actinidia30605 Actinidia chinensis HOM05D005538 ORTHO05D007055 5.7e-67 257.7 149 77.9
TAR371G0765 Trochodendron aralioides HOM05D005538 ORTHO05D007055 9.8e-67 256.9 151 75.5
Actinidia22132 Actinidia chinensis HOM05D005538 ORTHO05D007055 6.3e-66 254.2 149 78.5
TAR622G0886 Trochodendron aralioides HOM05D005538 ORTHO05D007055 8.3e-66 253.8 150 75.3
CSS0040217 Camellia sinensis var. sinensis HOM05D005538 ORTHO05D007055 1.4e-65 253.1 149 77.2
TAR629G0377 Trochodendron aralioides HOM05D005538 ORTHO05D007055 7.0e-65 250.8 152 73.7
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 1.3e-63 246.5 144 77.1
PSO017G1114 Papaver somniferum HOM05D005538 ORTHO05D007055 2.3e-63 245.7 153 75.2
Lj3A1076T34 Lonicera japonica HOM05D005538 ORTHO05D007055 2.9e-63 245.4 161 70.2
unitig_8.g3121 Utricularia gibba HOM05D005538 ORTHO05D007055 6.6e-63 244.2 152 73.0
HanXRQChr06g0175181 Helianthus annuus HOM05D005538 ORTHO05D007055 8.6e-63 243.8 154 74.7
PSO478G3672 Papaver somniferum HOM05D005538 ORTHO05D007055 8.6e-63 243.8 153 74.5
MBI07_g37483_MAGBIO Magnolia biondii HOM05D005538 ORTHO05D007055 1.9e-62 242.7 158 70.3
Nn3g16327 Nelumbo nucifera HOM05D005538 ORTHO05D007055 1.9e-62 242.7 150 73.3
vmacro22631 Vaccinium macrocarpon HOM05D005538 ORTHO05D007055 5.5e-62 241.1 155 71.6
CAN.G1277.4 Capsicum annuum HOM05D005538 ORTHO05D007055 7.2e-62 240.7 159 69.8
Cc11_g17450 Coffea canephora HOM05D005538 ORTHO05D007055 1.2e-61 240.0 130 81.5
Haze_12470 Corylus avellana HOM05D005538 ORTHO05D007055 2.8e-61 238.8 150 70.7
Cfa009412 Carpinus fangiana HOM05D005538 ORTHO05D007055 4.7e-61 238.0 150 70.0
Manes.08G103200 Manihot esculenta HOM05D005538 ORTHO05D007055 8.0e-61 237.3 149 72.5
CiPaw.05G104000 Carya illinoinensis HOM05D005538 ORTHO05D007055 1.4e-60 236.5 150 68.7
Potri.001G061900 Populus trichocarpa HOM05D005538 ORTHO05D007055 1.8e-60 236.1 149 69.1
Potri.003G165900 Populus trichocarpa HOM05D005538 ORTHO05D007055 1.8e-60 236.1 149 69.1
GSVIVG01000954001 Vitis vinifera HOM05D005538 ORTHO05D007055 1.8e-60 236.1 142 73.2
HanXRQChr17g0540491 Helianthus annuus HOM05D005538 ORTHO05D007055 2.3e-60 235.7 149 71.8
QL03p050357 Quercus lobata HOM05D005538 ORTHO05D007055 2.3e-60 235.7 122 82.0
Sabra03G0121100 Salix brachista HOM05D005538 ORTHO05D007055 5.2e-60 234.6 149 68.5
MSTRG.469 Avicennia marina HOM05D005538 ORTHO05D007055 6.8e-60 234.2 174 60.9
CANSAT56G2313 Cannabis sativa HOM05D005538 ORTHO05D007055 6.8e-60 234.2 149 68.5
TWI18G0823 Tripterygium wilfordii HOM05D005538 ORTHO05D007055 1.2e-59 233.4 149 70.5
Ah.03g135760 Amaranthus hybridus HOM05D005538 ORTHO05D007055 2.0e-59 232.6 150 70.7
Duzib052G1117 Durio zibethinus HOM05D005538 ORTHO05D007055 2.6e-59 232.3 150 68.0
AUR62028865 Chenopodium quinoa HOM05D005538 ORTHO05D007055 3.4e-59 231.9 164 63.4
Eucgr.B03544 Eucalyptus grandis HOM05D005538 ORTHO05D007055 3.4e-59 231.9 149 69.8
Ciclev10033047m.g Citrus clementina HOM05D005538 ORTHO05D007055 4.4e-59 231.5 149 68.5
Manes.09G185800 Manihot esculenta HOM05D005538 ORTHO05D007055 2.2e-58 229.2 149 70.5
CDE05G2048 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 2.9e-58 228.8 149 67.1
EL10Ac6g13582 Beta vulgaris HOM05D005538 ORTHO05D007055 3.7e-58 228.4 157 66.2
CDE05G1586 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 3.7e-58 228.4 149 67.1
ECA246G0794 Erigeron canadensis HOM05D005538 ORTHO05D007055 3.7e-58 228.4 157 68.2
CiPaw.06G107500 Carya illinoinensis HOM05D005538 ORTHO05D007055 8.3e-58 227.3 147 68.7
Aqoxy3G01758 Aquilegia oxysepala HOM05D005538 ORTHO05D007055 4.1e-57 224.9 159 65.4
MELO3C022346.2 Cucumis melo HOM05D005538 ORTHO05D007055 5.4e-57 224.6 150 65.3
ATR0582G064 Amborella trichopoda HOM05D005538 ORTHO05D007055 7.0e-57 224.2 149 67.1
Glyma.18G301900 Glycine max HOM05D005538 ORTHO05D007055 7.0e-57 224.2 151 68.2
Gohir.A12G140500 Gossypium hirsutum HOM05D005538 ORTHO05D007055 7.0e-57 224.2 150 66.0
CsaV3_6G007860 Cucumis sativus L. HOM05D005538 ORTHO05D007055 1.2e-56 223.4 150 65.3
Hund25495 Selenicereus undatus HOM05D005538 ORTHO05D007055 1.2e-56 223.4 158 63.9
Gorai.008G156500 Gossypium raimondii HOM05D005538 ORTHO05D007055 7.8e-56 220.7 149 65.8
COL.COLO4_34942 Corchorus olitorius HOM05D005538 ORTHO05D007055 1.0e-55 220.3 138 70.3
VMungo1383G2546 Vigna mungo HOM05D005538 ORTHO05D007055 1.0e-55 220.3 118 80.5
Glyma.08G360100 Glycine max HOM05D005538 ORTHO05D007055 1.3e-55 219.9 151 66.9
Gohir.D12G145100 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.3e-55 219.9 149 65.8
Thecc.02G196400 Theobroma cacao HOM05D005538 ORTHO05D007055 1.3e-55 219.9 150 64.7
Duzib248G0674 Durio zibethinus HOM05D005538 ORTHO05D007055 1.1e-54 216.9 150 63.3
Phvul.008G000500 Phaseolus vulgaris HOM05D005538 ORTHO05D007055 1.9e-54 216.1 146 66.4
Prupe.1G219100 Prunus persica HOM05D005538 ORTHO05D007055 2.5e-54 215.7 150 65.3
Rhsim12G0021000 Rhododendron simsii HOM05D005538 ORTHO05D007055 4.3e-54 214.9 161 62.7
ClCG06G001820 Citrullus lanatus HOM05D005538 ORTHO05D007055 7.3e-54 214.2 150 64.7
THA.LOC104825475 Tarenaya hassleriana HOM05D005538 ORTHO05D007055 9.5e-54 213.8 123 74.0
Gohir.A03G151200 Gossypium hirsutum HOM05D005538 ORTHO05D007055 2.1e-53 212.6 152 63.2
Gohir.D02G174200 Gossypium hirsutum HOM05D005538 ORTHO05D007055 2.1e-53 212.6 152 63.2
Gorai.005G195900 Gossypium raimondii HOM05D005538 ORTHO05D007055 2.1e-53 212.6 152 63.2
Ah.02g131140 Amaranthus hybridus HOM05D005538 ORTHO05D007055 2.8e-53 212.2 150 64.7
MD16G1126800 Malus domestica HOM05D005538 ORTHO05D007055 6.1e-53 211.1 150 62.7
Gohir.D01G019700 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.4e-52 209.9 149 63.8
Sed0021477 Sechium edule HOM05D005538 ORTHO05D007055 1.4e-52 209.9 150 62.7
MD13G1126300 Malus domestica HOM05D005538 ORTHO05D007055 1.8e-52 209.5 150 64.0
Ca_06515_v3 Cicer arietinum L. HOM05D005538 ORTHO05D007055 2.3e-52 209.1 128 68.0
Psat3g208320 Pisum sativum HOM05D005538 ORTHO05D007055 2.3e-52 209.1 126 70.6
Gohir.A01G021300 Gossypium hirsutum HOM05D005538 ORTHO05D007055 6.8e-52 207.6 149 63.1
Gorai.002G022100 Gossypium raimondii HOM05D005538 ORTHO05D007055 6.8e-52 207.6 149 63.1
A02p01730 Brassica napus HOM05D005538 ORTHO05D007055 8.9e-52 207.2 150 60.7
BraA02t05152Z Brassica rapa HOM05D005538 ORTHO05D007055 8.9e-52 207.2 150 60.7
Thhalv10014995m.g Eutrema salsugineum HOM05D005538 ORTHO05D007055 1.2e-51 206.8 123 70.7
BcaNung01169 Brassica carinata HOM05D005538 ORTHO05D007055 1.5e-51 206.5 123 69.9
BraA10t44563Z Brassica rapa HOM05D005538 ORTHO05D007055 1.5e-51 206.5 150 60.7
AT5G13190 Arabidopsis thaliana HOM05D005538 ORTHO05D007055 2.0e-51 206.1 123 70.7
Medtr7g005440 Medicago truncatula HOM05D005538 ORTHO05D007055 2.0e-51 206.1 126 69.0
AL6G23800 Arabidopsis lyrata HOM05D005538 ORTHO05D007055 2.6e-51 205.7 123 70.7
C02p05970 Brassica napus HOM05D005538 ORTHO05D007055 2.6e-51 205.7 150 60.7
BolC2t06540H Brassica oleracea HOM05D005538 ORTHO05D007055 2.6e-51 205.7 150 60.7
Carub.0006s1136 Capsella rubella HOM05D005538 ORTHO05D007055 4.4e-51 204.9 123 69.9
Lj1g0020005 Lotus japonicus HOM05D005538 ORTHO05D007055 7.5e-51 204.1 112 78.6
TPR.G15629 Trifolium pratense HOM05D005538 ORTHO05D007055 7.5e-51 204.1 129 69.0
C09p63880 Brassica napus HOM05D005538 ORTHO05D007055 1.3e-50 203.4 150 61.3
BolC9t59228H Brassica oleracea HOM05D005538 ORTHO05D007055 1.3e-50 203.4 150 61.3
Sp6g30790 Schrenkiella parvula HOM05D005538 ORTHO05D007055 1.3e-50 203.4 123 69.9
A10p25020 Brassica napus HOM05D005538 ORTHO05D007055 2.2e-50 202.6 151 60.3
FAN12G2387 Fragaria x ananassa HOM05D005538 ORTHO05D007055 3.2e-49 198.7 149 62.4
Aa31LG3G14470 Aethionema arabicum HOM05D005538 ORTHO05D007055 4.1e-49 198.4 123 69.1
Os02g0515600 Oryza sativa ssp. japonica HOM05D005538 ORTHO05D007055 4.1e-49 198.4 148 60.1
FAN07G2678 Fragaria x ananassa HOM05D005538 ORTHO05D007055 1.2e-48 196.8 137 65.7
FAN17G2587 Fragaria x ananassa HOM05D005538 ORTHO05D007055 3.5e-48 195.3 123 69.1
Sc04g0010460 Simmondsia chinensis HOM05D005538 ORTHO05D007055 7.8e-48 194.1 119 72.3
RcHm_v2.0_Chr4g0429351 Rosa chinensis HOM05D005538 ORTHO05D007055 1.7e-47 193.0 150 59.3
CARHR200280 Cardamine hirsuta HOM05D005538 ORTHO05D007055 5.6e-46 188.0 130 63.8
Hund28220 Selenicereus undatus HOM05D005538 ORTHO05D007055 4.7e-45 184.9 148 58.8
Hund28225 Selenicereus undatus HOM05D005538 ORTHO05D007055 4.7e-45 184.9 148 58.8
SMO271G0002 Selaginella moellendorffii HOM05D005538 ORTHO05D007055 2.2e-42 176.0 130 59.2
Zm00001eb241880 Zea mays HOM05D005538 ORTHO05D007055 7.1e-41 171.0 184 47.8
AagrBONN_evm.TU.Sc2ySwM_117.1139 Anthoceros agrestis HOM05D005538 ORTHO05D007055 3.9e-39 165.2 119 57.1
Atru.chr11.2402 Acer truncatum HOM05D005538 ORTHO05D007055 5.1e-39 164.9 173 47.4
FvH4_4g23080 Fragaria vesca HOM05D005538 ORTHO05D007055 1.4e-36 156.8 128 58.6
Pp3c26_1170 Physcomitrium patens HOM05D005538 ORTHO05D007055 3.4e-35 152.1 146 50.0
CBR_g4442 Chara braunii HOM05D005538 ORTHO05D007055 1.7e-34 149.8 156 46.2
AagrBONN_evm.TU.Sc2ySwM_117.1282 Anthoceros agrestis HOM05D005538 ORTHO05D007055 3.5e-32 142.1 144 48.6
TWI75G1796 Tripterygium wilfordii HOM05D005538 ORTHO05D007055 3.5e-32 142.1 87 71.3
HPP92_011548 Vanilla planifolia HOM05D005538 ORTHO05D007055 3.6e-29 132.1 75 76.0
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 2.2e-26 122.9 124 54.0
Oeu039177.1 Olea europaea HOM05D005538 ORTHO05D007055 2.2e-26 122.9 59 88.1
Cpa.g.sc123.51 Carica papaya HOM05D005538 ORTHO05D007055 3.5e-24 115.5 58 81.0
SalBow8G4168 Salvia bowleyana HOM05D005538 ORTHO05D007055 1.1e-22 110.5 84 64.3
TAR629G2749 Trochodendron aralioides HOM05D005538 ORTHO05D007055 9.0e-20 100.9 81 58.0
TAR628G0286 Trochodendron aralioides HOM05D000367 ORTHO05D001438 5.8e-19 98.2 80 56.2
Lsat_1_v5_gn_6_34980 Lactuca sativa HOM05D005538 ORTHO05D007055 9.9e-19 97.4 111 47.7
Hma1.2p1_0365F.1_g136780 Hydrangea macrophylla HOM05D005538 ORTHO05D007055 2.4e-17 92.8 74 63.5
TAR623G0421 Trochodendron aralioides HOM05D004785 ORTHO05D005704 9.3e-17 90.9 56 66.1
TAR623G1654 Trochodendron aralioides HOM05D005538 ORTHO05D007055 1.2e-16 90.5 80 53.8
RcHm_v2.0_Chr4g0404941 Rosa chinensis HOM05D005538 ORTHO05D007055 5.3e-12 75.1 105 41.0
SalBow8G3396 Salvia bowleyana HOM05D018271 ORTHO05D007055 9.0e-12 74.3 58 63.8
SEGI_11247 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 6.4e-10 68.2 56 53.6
SEGI_18844 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 6.4e-10 68.2 62 50.0
SEGI_18352 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 1.1e-09 67.4 56 53.6
BcaB01g05369 Brassica carinata HOM05D005538 ORTHO05D007055 1.9e-09 66.6 120 33.3
SEGI_29074 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 1.9e-09 66.6 55 54.5
SEGI_30741 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 1.9e-09 66.6 55 54.5
RcHm_v2.0_Chr1g0337501 Rosa chinensis HOM05D005538 ORTHO05D007055 2.4e-09 66.2 111 35.1
DCAR_028448 Daucus carota HOM05D005538 ORTHO05D007055 5.5e-09 65.1 78 41.0
HPP92_011549 Vanilla planifolia HOM05D005538 ORTHO05D431340 1.9e-06 56.6 52 53.8
SEGI_11753 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 2.5e-06 56.2 46 52.2
RcHm_v2.0_Chr5g0057011 Rosa chinensis HOM05D005538 ORTHO05D007055 5.6e-06 55.1 102 31.4


User provided reference genes

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