Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 3.4e-133 478.4 254 100.0
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 3.7e-55 219.2 252 50.4
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 2.7e-53 213.0 265 49.1
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.0e-52 211.1 264 49.6
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.0e-52 211.1 258 50.0
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 3.9e-52 209.1 272 47.8
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 9.5e-51 204.5 277 47.7
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 1.6e-50 203.8 266 48.5
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 2.8e-50 203.0 283 49.1
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 4.7e-50 202.2 258 49.2
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 8.0e-50 201.4 266 46.2
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 8.0e-50 201.4 272 46.3
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 1.0e-49 201.1 258 48.8
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.8e-49 200.3 258 48.8
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 2.3e-49 199.9 275 46.5
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 3.1e-49 199.5 271 46.9
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 5.2e-49 198.7 284 46.1
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 8.9e-49 198.0 282 45.4
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 1.2e-48 197.6 278 46.0
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 4.4e-48 195.7 243 51.4
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 4.4e-48 195.7 280 43.6
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 5.8e-48 195.3 239 51.9
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 5.8e-48 195.3 239 51.9
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 1.3e-47 194.1 272 46.3
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 3.7e-47 192.6 226 50.0
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 3.7e-47 192.6 296 44.6
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 4.9e-47 192.2 281 44.8
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 6.4e-47 191.8 266 45.1
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 1.2e-45 187.6 266 43.6
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.6e-45 187.2 265 44.2
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 3.5e-45 186.0 268 45.1
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 4.6e-45 185.7 283 45.2
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 4.6e-45 185.7 276 43.1
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 7.8e-45 184.9 266 42.9
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 2.3e-44 183.3 226 48.2
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 2.3e-44 183.3 278 42.4
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 5.0e-44 182.2 265 43.0
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 8.6e-44 181.4 259 46.7
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 1.1e-43 181.0 261 46.4
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 1.1e-43 181.0 268 42.9
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 1.1e-43 181.0 247 47.0
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 1.5e-43 180.6 256 45.7
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 5.6e-43 178.7 236 45.8
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 1.6e-42 177.2 241 45.2
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 1.6e-42 177.2 249 45.0
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 8.1e-42 174.9 285 43.9
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 1.1e-41 174.5 268 43.7
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 2.3e-41 173.3 232 47.4
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 2.3e-41 173.3 313 39.6
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 2.3e-41 173.3 228 47.8
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 3.1e-41 172.9 200 50.0
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 3.1e-41 172.9 200 50.0
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 4.0e-41 172.6 247 48.6
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 6.8e-41 171.8 253 44.3
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 1.5e-40 170.6 201 51.7
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.5e-40 170.6 314 39.5
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 1.5e-40 170.6 275 41.5
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 2.0e-40 170.2 206 48.5
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 2.6e-40 169.9 242 44.6
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 2.2e-39 166.8 280 42.9
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 3.7e-39 166.0 278 40.6
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 1.4e-38 164.1 266 42.9
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 1.9e-38 163.7 274 39.4
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 2.4e-38 163.3 254 42.9
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 2.4e-38 163.3 324 37.7
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 3.2e-38 162.9 266 46.2
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 7.1e-38 161.8 231 46.8
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 9.2e-38 161.4 223 44.4
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 2.7e-37 159.8 257 40.5
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 1.7e-36 157.1 235 43.4
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 3.0e-36 156.4 242 41.7
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 3.0e-36 156.4 298 40.3
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 6.6e-36 155.2 245 42.9
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 1.5e-35 154.1 268 39.9
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 1.9e-35 153.7 273 39.9
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 2.5e-35 153.3 333 36.0
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 4.3e-35 152.5 273 39.6
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 7.3e-35 151.8 264 40.9
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 7.3e-35 151.8 264 40.9
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 7.3e-35 151.8 298 38.9
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 9.5e-35 151.4 267 39.7
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.2e-34 151.0 297 38.0
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 1.6e-34 150.6 263 41.1
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 1.6e-34 150.6 263 41.1
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 2.1e-34 150.2 291 38.5
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 3.6e-34 149.4 258 39.5
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 4.7e-34 149.1 279 39.1
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 4.7e-34 149.1 212 43.9
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 6.2e-34 148.7 254 39.8
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 8.1e-34 148.3 248 41.5
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 3.1e-33 146.4 221 43.9
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 9.9e-32 141.4 241 40.7
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 4.9e-31 139.0 284 39.1
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 3.2e-30 136.3 245 41.6
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 6.0e-29 132.1 328 34.8
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 1.3e-28 131.0 257 39.3
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 4.4e-24 115.9 235 36.6
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 3.9e-20 102.8 213 34.3
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 4.5e-16 89.4 125 41.6
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.3e-15 87.8 206 32.0
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 1.3e-12 77.8 129 43.4
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 6.2e-10 68.9 81 49.4
SEGI_13333 Sequoiadendron giganteum HOM05D007298 ORTHO05D009226 1.4e-06 57.8 189 29.6
BcaC09g50696 Brassica carinata HOM05D007298 ORTHO05D009226 3.2e-06 56.6 54 44.4
C01p22230 Brassica napus HOM05D007298 ORTHO05D009226 3.2e-06 56.6 54 44.4
BolC1t02153H Brassica oleracea HOM05D007298 ORTHO05D009226 3.2e-06 56.6 54 44.4


User provided reference genes

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